RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
CHRNA1-201ENST00000261007 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
CHRNA1-201ENST00000261007 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
CHRNA1-201ENST00000261007 FHAD1B1AJZ9 1412 aa15.99■□□□□ 0.15
CHRNA1-201ENST00000261007 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
CHRNA1-201ENST00000261007 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
CHRNA1-201ENST00000261007 MRC2Q9UBG0 1479 aa15.92■□□□□ 0.14
CHRNA1-201ENST00000261007 RRBP1Q9P2E9 1410 aaKnown RBP15.92■□□□□ 0.14
CHRNA1-201ENST00000261007 TARBP1Q13395 1621 aaKnown RBP15.92■□□□□ 0.14
CHRNA1-201ENST00000261007 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
CHRNA1-201ENST00000261007 AQRO60306 1485 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHRNA1-201ENST00000261007 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
CHRNA1-201ENST00000261007 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
CHRNA1-201ENST00000261007 CFAP43Q8NDM7 1665 aa15.87■□□□□ 0.13
CHRNA1-201ENST00000261007 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
CHRNA1-201ENST00000261007 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
CHRNA1-201ENST00000261007 FYCO1Q9BQS8 1478 aa15.86■□□□□ 0.13
CHRNA1-201ENST00000261007 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
CHRNA1-201ENST00000261007 MIER1Q8N108 512 aa15.86■□□□□ 0.13
CHRNA1-201ENST00000261007 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
CHRNA1-201ENST00000261007 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
CHRNA1-201ENST00000261007 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
CHRNA1-201ENST00000261007 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.12
CHRNA1-201ENST00000261007 PBRM1Q86U86 1689 aa15.83■□□□□ 0.12
CHRNA1-201ENST00000261007 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
CHRNA1-201ENST00000261007 LRRC9Q6ZRR7 1453 aa15.83■□□□□ 0.12
CHRNA1-201ENST00000261007 CCNB3Q8WWL7 1395 aa15.82■□□□□ 0.12
CHRNA1-201ENST00000261007 WDR62O43379 1518 aa15.81■□□□□ 0.12
CHRNA1-201ENST00000261007 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
CHRNA1-201ENST00000261007 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
CHRNA1-201ENST00000261007 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
CHRNA1-201ENST00000261007 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
CHRNA1-201ENST00000261007 THOC2Q8NI27 1593 aaKnown RBP15.77■□□□□ 0.12
CHRNA1-201ENST00000261007 ADAMTS12P58397 1594 aa15.77■□□□□ 0.11
CHRNA1-201ENST00000261007 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
CHRNA1-201ENST00000261007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHRNA1-201ENST00000261007 P3H3Q8IVL6 736 aa15.71■□□□□ 0.1
CHRNA1-201ENST00000261007 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
CHRNA1-201ENST00000261007 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
CHRNA1-201ENST00000261007 DHX57Q6P158 1386 aaKnown RBP15.67■□□□□ 0.1
CHRNA1-201ENST00000261007 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
CHRNA1-201ENST00000261007 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
CHRNA1-201ENST00000261007 UGGT2Q9NYU1 1516 aa15.64■□□□□ 0.09
CHRNA1-201ENST00000261007 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
CHRNA1-201ENST00000261007 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
CHRNA1-201ENST00000261007 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
CHRNA1-201ENST00000261007 SUPT16HQ9Y5B9 1047 aaKnown RBP15.62■□□□□ 0.09
CHRNA1-201ENST00000261007 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
CHRNA1-201ENST00000261007 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
CHRNA1-201ENST00000261007 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
CHRNA1-201ENST00000261007 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
CHRNA1-201ENST00000261007 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
CHRNA1-201ENST00000261007 SUPT6HQ7KZ85 1726 aaKnown RBP15.59■□□□□ 0.09
CHRNA1-201ENST00000261007 SETD5Q9C0A6 1442 aa15.59■□□□□ 0.09
CHRNA1-201ENST00000261007 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
CHRNA1-201ENST00000261007 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
CHRNA1-201ENST00000261007 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
CHRNA1-201ENST00000261007 RAB3GAP2Q9H2M9 1393 aa15.56■□□□□ 0.08
CHRNA1-201ENST00000261007 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
CHRNA1-201ENST00000261007 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
CHRNA1-201ENST00000261007 MYOM3Q5VTT5 1437 aa15.53■□□□□ 0.08
CHRNA1-201ENST00000261007 NCOA2Q15596 1464 aa15.53■□□□□ 0.08
CHRNA1-201ENST00000261007 ITGAEP38570 1179 aa15.53■□□□□ 0.08
CHRNA1-201ENST00000261007 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
CHRNA1-201ENST00000261007 SYNJ2O15056 1496 aa15.52■□□□□ 0.08
CHRNA1-201ENST00000261007 ARHGEF11O15085 1522 aa15.52■□□□□ 0.08
CHRNA1-201ENST00000261007 TSHZ2Q9NRE2 1034 aa15.51■□□□□ 0.07
CHRNA1-201ENST00000261007 EPRSP07814 1512 aaKnown RBP15.51■□□□□ 0.07
CHRNA1-201ENST00000261007 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
CHRNA1-201ENST00000261007 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.07
CHRNA1-201ENST00000261007 PTPN23Q9H3S7 1636 aa15.45■□□□□ 0.06
CHRNA1-201ENST00000261007 MIA2Q96PC5 1412 aa15.45■□□□□ 0.06
CHRNA1-201ENST00000261007 MAPKBP1O60336 1514 aa15.45■□□□□ 0.06
CHRNA1-201ENST00000261007 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
CHRNA1-201ENST00000261007 HFM1A2PYH4 1435 aa15.44■□□□□ 0.06
CHRNA1-201ENST00000261007 NUP160Q12769 1436 aa15.44■□□□□ 0.06
CHRNA1-201ENST00000261007 RAPGEF6Q8TEU7 1601 aa15.44■□□□□ 0.06
CHRNA1-201ENST00000261007 MAGI3Q5TCQ9 1506 aa15.44■□□□□ 0.06
CHRNA1-201ENST00000261007 TIMELESSQ9UNS1 1208 aa15.43■□□□□ 0.06
CHRNA1-201ENST00000261007 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
CHRNA1-201ENST00000261007 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
CHRNA1-201ENST00000261007 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
CHRNA1-201ENST00000261007 CDK11AQ9UQ88 783 aaPredicted RBP15.4■□□□□ 0.06
CHRNA1-201ENST00000261007 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
CHRNA1-201ENST00000261007 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
CHRNA1-201ENST00000261007 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
CHRNA1-201ENST00000261007 GCC2Q8IWJ2 1684 aa15.35■□□□□ 0.05
CHRNA1-201ENST00000261007 NAIPQ13075 1403 aa15.34■□□□□ 0.05
CHRNA1-201ENST00000261007 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
CHRNA1-201ENST00000261007 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
CHRNA1-201ENST00000261007 BCL11AQ9H165 835 aa15.31■□□□□ 0.04
CHRNA1-201ENST00000261007 TROQ12816 1431 aaPredicted RBP15.31■□□□□ 0.04
CHRNA1-201ENST00000261007 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
CHRNA1-201ENST00000261007 ITSN2Q9NZM3 1697 aa15.3■□□□□ 0.04
CHRNA1-201ENST00000261007 FBLN2P98095 1184 aa15.29■□□□□ 0.04
CHRNA1-201ENST00000261007 ROCK1Q13464 1354 aa15.28■□□□□ 0.04
CHRNA1-201ENST00000261007 ABCA8O94911 1581 aa15.27■□□□□ 0.04
CHRNA1-201ENST00000261007 DNMT1P26358 1616 aaKnown RBP15.27■□□□□ 0.03
CHRNA1-201ENST00000261007 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
CHRNA1-201ENST00000261007 DAPK1P53355 1430 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms