RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 MAPKBP1O60336 1514 aa18.57■□□□□ 0.56
TUBGCP4-201ENST00000260383 CUX2O14529 1486 aa18.56■□□□□ 0.56
TUBGCP4-201ENST00000260383 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
TUBGCP4-201ENST00000260383 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
TUBGCP4-201ENST00000260383 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
TUBGCP4-201ENST00000260383 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
TUBGCP4-201ENST00000260383 RAB3GAP2Q9H2M9 1393 aa18.51■□□□□ 0.55
TUBGCP4-201ENST00000260383 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
TUBGCP4-201ENST00000260383 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
TUBGCP4-201ENST00000260383 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
TUBGCP4-201ENST00000260383 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
TUBGCP4-201ENST00000260383 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
TUBGCP4-201ENST00000260383 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
TUBGCP4-201ENST00000260383 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
TUBGCP4-201ENST00000260383 SYNJ1O43426 1573 aa18.45■□□□□ 0.54
TUBGCP4-201ENST00000260383 ARAP1Q96P48 1450 aa18.44■□□□□ 0.54
TUBGCP4-201ENST00000260383 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.43■□□□□ 0.54
TUBGCP4-201ENST00000260383 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
TUBGCP4-201ENST00000260383 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
TUBGCP4-201ENST00000260383 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
TUBGCP4-201ENST00000260383 UBE2Q2Q8WVN8 375 aa18.33■□□□□ 0.53
TUBGCP4-201ENST00000260383 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
TUBGCP4-201ENST00000260383 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
TUBGCP4-201ENST00000260383 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.51
TUBGCP4-201ENST00000260383 CCDC184Q52MB2 194 aa18.25■□□□□ 0.51
TUBGCP4-201ENST00000260383 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
TUBGCP4-201ENST00000260383 ANP32AP39687 249 aaKnown RBP18.23■□□□□ 0.51
TUBGCP4-201ENST00000260383 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
TUBGCP4-201ENST00000260383 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
TUBGCP4-201ENST00000260383 FAM50AQ14320 339 aaKnown RBP18.16■□□□□ 0.5
TUBGCP4-201ENST00000260383 FAM9BQ8IZU0 186 aa18.15■□□□□ 0.5
TUBGCP4-201ENST00000260383 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.5
TUBGCP4-201ENST00000260383 TONSLQ96HA7 1378 aa18.12■□□□□ 0.49
TUBGCP4-201ENST00000260383 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
TUBGCP4-201ENST00000260383 LAS1LQ9Y4W2 734 aaKnown RBP18.12■□□□□ 0.49
TUBGCP4-201ENST00000260383 ARHGAP35Q9NRY4 1499 aa18.11■□□□□ 0.49
TUBGCP4-201ENST00000260383 PHLDB1Q86UU1 1377 aa18.11■□□□□ 0.49
TUBGCP4-201ENST00000260383 NEFMP07197 916 aa18.1■□□□□ 0.49
TUBGCP4-201ENST00000260383 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
TUBGCP4-201ENST00000260383 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
TUBGCP4-201ENST00000260383 ZBED9Q6R2W3 1325 aa18.09■□□□□ 0.49
TUBGCP4-201ENST00000260383 EIF5BO60841 1220 aaKnown RBP18.08■□□□□ 0.49
TUBGCP4-201ENST00000260383 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.48
TUBGCP4-201ENST00000260383 WASHC2CQ9Y4E1 1318 aa18.07■□□□□ 0.48
TUBGCP4-201ENST00000260383 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
TUBGCP4-201ENST00000260383 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
TUBGCP4-201ENST00000260383 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
TUBGCP4-201ENST00000260383 TIAM1Q13009 1591 aa18.02■□□□□ 0.48
TUBGCP4-201ENST00000260383 HSPA5P11021 654 aaKnown RBP18.02■□□□□ 0.48
TUBGCP4-201ENST00000260383 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
TUBGCP4-201ENST00000260383 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
TUBGCP4-201ENST00000260383 USP35Q9P2H5 1018 aa18.01■□□□□ 0.47
TUBGCP4-201ENST00000260383 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
TUBGCP4-201ENST00000260383 LRRC9Q6ZRR7 1453 aa17.99■□□□□ 0.47
TUBGCP4-201ENST00000260383 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
TUBGCP4-201ENST00000260383 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
TUBGCP4-201ENST00000260383 KDM5BQ9UGL1 1544 aa17.95■□□□□ 0.46
TUBGCP4-201ENST00000260383 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
TUBGCP4-201ENST00000260383 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
TUBGCP4-201ENST00000260383 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
TUBGCP4-201ENST00000260383 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
TUBGCP4-201ENST00000260383 MAP3K1Q13233 1512 aa17.91■□□□□ 0.46
TUBGCP4-201ENST00000260383 GSE1Q14687 1217 aa17.91■□□□□ 0.46
TUBGCP4-201ENST00000260383 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
TUBGCP4-201ENST00000260383 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.46
TUBGCP4-201ENST00000260383 PDE4AP27815 886 aa17.88■□□□□ 0.45
TUBGCP4-201ENST00000260383 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
TUBGCP4-201ENST00000260383 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
TUBGCP4-201ENST00000260383 CCDC18Q5T9S5 1454 aa17.86■□□□□ 0.45
TUBGCP4-201ENST00000260383 ATP1B4Q9UN42 357 aaPredicted RBP17.85■□□□□ 0.45
TUBGCP4-201ENST00000260383 FRAT1Q92837 279 aaPredicted RBP17.85■□□□□ 0.45
TUBGCP4-201ENST00000260383 PKNOX2Q96KN3 472 aa17.85■□□□□ 0.45
TUBGCP4-201ENST00000260383 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
TUBGCP4-201ENST00000260383 UACAQ9BZF9 1416 aa17.84■□□□□ 0.45
TUBGCP4-201ENST00000260383 CCDC7Q96M83 1385 aa17.84■□□□□ 0.45
TUBGCP4-201ENST00000260383 BACH2Q9BYV9 841 aa17.84■□□□□ 0.45
TUBGCP4-201ENST00000260383 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.451e-6■■■■□ 21.8
TUBGCP4-201ENST00000260383 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
TUBGCP4-201ENST00000260383 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
TUBGCP4-201ENST00000260383 NFKBIBQ15653 356 aa17.81■□□□□ 0.44
TUBGCP4-201ENST00000260383 PTPRKQ15262 1439 aa17.79■□□□□ 0.44
TUBGCP4-201ENST00000260383 NCOA1Q15788 1441 aa17.79■□□□□ 0.44
TUBGCP4-201ENST00000260383 P3H3Q8IVL6 736 aa17.79■□□□□ 0.44
TUBGCP4-201ENST00000260383 CFTRP13569 1480 aa17.79■□□□□ 0.44
TUBGCP4-201ENST00000260383 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
TUBGCP4-201ENST00000260383 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.44
TUBGCP4-201ENST00000260383 SLC4A3P48751 1232 aa17.77■□□□□ 0.43
TUBGCP4-201ENST00000260383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
TUBGCP4-201ENST00000260383 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
TUBGCP4-201ENST00000260383 SKAP1Q86WV1 359 aa17.74■□□□□ 0.43
TUBGCP4-201ENST00000260383 CUX1P39880 1505 aa17.73■□□□□ 0.43
TUBGCP4-201ENST00000260383 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
TUBGCP4-201ENST00000260383 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
TUBGCP4-201ENST00000260383 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
TUBGCP4-201ENST00000260383 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
TUBGCP4-201ENST00000260383 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
TUBGCP4-201ENST00000260383 NAIPQ13075 1403 aa17.71■□□□□ 0.43
TUBGCP4-201ENST00000260383 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
TUBGCP4-201ENST00000260383 MS4A1P11836 297 aa17.7■□□□□ 0.42
TUBGCP4-201ENST00000260383 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms