RNA–Protein interactions for RNA: ENST00000260276.7

C11orf1-201, Transcript of chromosome 11 open reading frame 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf1, Length 2,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-201ENST00000260276 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
C11orf1-201ENST00000260276 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
C11orf1-201ENST00000260276 FBLN2P98095 1184 aa20.04■□□□□ 0.8
C11orf1-201ENST00000260276 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
C11orf1-201ENST00000260276 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
C11orf1-201ENST00000260276 CHD1O14646 1710 aa20.03■□□□□ 0.8
C11orf1-201ENST00000260276 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
C11orf1-201ENST00000260276 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
C11orf1-201ENST00000260276 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
C11orf1-201ENST00000260276 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
C11orf1-201ENST00000260276 SAMD9Q5K651 1589 aa19.98■□□□□ 0.79
C11orf1-201ENST00000260276 EFCAB5A4FU69 1503 aa19.96■□□□□ 0.79
C11orf1-201ENST00000260276 FHOD3Q2V2M9 1422 aa19.96■□□□□ 0.79
C11orf1-201ENST00000260276 KIAA0586Q9BVV6 1533 aa19.94■□□□□ 0.78
C11orf1-201ENST00000260276 NUP160Q12769 1436 aa19.94■□□□□ 0.78
C11orf1-201ENST00000260276 UGGT2Q9NYU1 1516 aa19.89■□□□□ 0.77
C11orf1-201ENST00000260276 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
C11orf1-201ENST00000260276 PCF11O94913 1555 aaKnown RBP19.86■□□□□ 0.77
C11orf1-201ENST00000260276 DISP1Q96F81 1524 aa19.84■□□□□ 0.77
C11orf1-201ENST00000260276 KIAA0556O60303 1618 aa19.83■□□□□ 0.77
C11orf1-201ENST00000260276 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
C11orf1-201ENST00000260276 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.75
C11orf1-201ENST00000260276 FMN1Q68DA7 1419 aa19.76■□□□□ 0.75
C11orf1-201ENST00000260276 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
C11orf1-201ENST00000260276 CASKIN1Q8WXD9 1431 aa19.74■□□□□ 0.75
C11orf1-201ENST00000260276 FYCO1Q9BQS8 1478 aa19.73■□□□□ 0.75
C11orf1-201ENST00000260276 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
C11orf1-201ENST00000260276 APLP2Q06481 763 aa19.73■□□□□ 0.75
C11orf1-201ENST00000260276 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
C11orf1-201ENST00000260276 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
C11orf1-201ENST00000260276 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
C11orf1-201ENST00000260276 TIAM1Q13009 1591 aa19.72■□□□□ 0.75
C11orf1-201ENST00000260276 TRIM26Q12899 539 aaPredicted RBP19.71■□□□□ 0.75
C11orf1-201ENST00000260276 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
C11orf1-201ENST00000260276 PRG4Q92954 1404 aaPredicted RBP19.69■□□□□ 0.74
C11orf1-201ENST00000260276 ERCC6L2Q5T890 1561 aa19.68■□□□□ 0.74
C11orf1-201ENST00000260276 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
C11orf1-201ENST00000260276 MAP3K1Q13233 1512 aa19.64■□□□□ 0.74
C11orf1-201ENST00000260276 HECW1Q76N89 1606 aa19.63■□□□□ 0.73
C11orf1-201ENST00000260276 RAPGEF6Q8TEU7 1601 aa19.62■□□□□ 0.73
C11orf1-201ENST00000260276 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
C11orf1-201ENST00000260276 PLB1Q6P1J6 1458 aa19.6■□□□□ 0.73
C11orf1-201ENST00000260276 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.73
C11orf1-201ENST00000260276 ARID3CA6NKF2 412 aa19.58■□□□□ 0.73
C11orf1-201ENST00000260276 NUP153P49790 1475 aaKnown RBP19.57■□□□□ 0.72
C11orf1-201ENST00000260276 EPRSP07814 1512 aaKnown RBP19.56■□□□□ 0.72
C11orf1-201ENST00000260276 MAGI3Q5TCQ9 1506 aa19.55■□□□□ 0.72
C11orf1-201ENST00000260276 ABCA8O94911 1581 aa19.54■□□□□ 0.72
C11orf1-201ENST00000260276 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
C11orf1-201ENST00000260276 OSCARQ8IYS5 282 aa19.52■□□□□ 0.71
C11orf1-201ENST00000260276 PTPRGP23470 1445 aa19.51■□□□□ 0.71
C11orf1-201ENST00000260276 MTUS2Q5JR59 1369 aa19.46■□□□□ 0.71
C11orf1-201ENST00000260276 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
C11orf1-201ENST00000260276 PHLDB1Q86UU1 1377 aa19.45■□□□□ 0.7
C11orf1-201ENST00000260276 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
C11orf1-201ENST00000260276 UACAQ9BZF9 1416 aa19.41■□□□□ 0.7
C11orf1-201ENST00000260276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
C11orf1-201ENST00000260276 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
C11orf1-201ENST00000260276 ATP10BO94823 1461 aa19.4■□□□□ 0.7
C11orf1-201ENST00000260276 RRBP1Q9P2E9 1410 aaKnown RBP19.4■□□□□ 0.7
C11orf1-201ENST00000260276 NCOA2Q15596 1464 aa19.39■□□□□ 0.7
C11orf1-201ENST00000260276 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
C11orf1-201ENST00000260276 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
C11orf1-201ENST00000260276 KIF14Q15058 1648 aa19.34■□□□□ 0.69
C11orf1-201ENST00000260276 CCNB3Q8WWL7 1395 aa19.34■□□□□ 0.69
C11orf1-201ENST00000260276 ADCY10Q96PN6 1610 aa19.33■□□□□ 0.68
C11orf1-201ENST00000260276 TROQ12816 1431 aaPredicted RBP19.31■□□□□ 0.68
C11orf1-201ENST00000260276 ZCCHC11Q5TAX3 1644 aaKnown RBP19.31■□□□□ 0.68
C11orf1-201ENST00000260276 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
C11orf1-201ENST00000260276 CDK11AQ9UQ88 783 aaPredicted RBP19.28■□□□□ 0.68
C11orf1-201ENST00000260276 MYOM3Q5VTT5 1437 aa19.28■□□□□ 0.68
C11orf1-201ENST00000260276 FGD6Q6ZV73 1430 aa19.28■□□□□ 0.68
C11orf1-201ENST00000260276 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
C11orf1-201ENST00000260276 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
C11orf1-201ENST00000260276 PTPN23Q9H3S7 1636 aa19.24■□□□□ 0.67
C11orf1-201ENST00000260276 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
C11orf1-201ENST00000260276 ITGAEP38570 1179 aa19.23■□□□□ 0.67
C11orf1-201ENST00000260276 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
C11orf1-201ENST00000260276 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
C11orf1-201ENST00000260276 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
C11orf1-201ENST00000260276 CDC42BPAQ5VT25 1732 aa19.2■□□□□ 0.66
C11orf1-201ENST00000260276 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
C11orf1-201ENST00000260276 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
C11orf1-201ENST00000260276 GPATCH8Q9UKJ3 1502 aaKnown RBP19.16■□□□□ 0.66
C11orf1-201ENST00000260276 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
C11orf1-201ENST00000260276 TTC37Q6PGP7 1564 aa19.16■□□□□ 0.66
C11orf1-201ENST00000260276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.66
C11orf1-201ENST00000260276 MIA2Q96PC5 1412 aa19.14■□□□□ 0.65
C11orf1-201ENST00000260276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.13■□□□□ 0.65
C11orf1-201ENST00000260276 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
C11orf1-201ENST00000260276 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
C11orf1-201ENST00000260276 CDC42BPBQ9Y5S2 1711 aa19.11■□□□□ 0.65
C11orf1-201ENST00000260276 KCNH8Q96L42 1107 aa19.11■□□□□ 0.65
C11orf1-201ENST00000260276 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
C11orf1-201ENST00000260276 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
C11orf1-201ENST00000260276 CAMSAP2Q08AD1 1489 aa19.08■□□□□ 0.64
C11orf1-201ENST00000260276 WDR7Q9Y4E6 1490 aa19.08■□□□□ 0.64
C11orf1-201ENST00000260276 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
C11orf1-201ENST00000260276 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
C11orf1-201ENST00000260276 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms