RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 EEA1Q15075 1411 aa20.76■□□□□ 0.91
RIPK1-201ENST00000259808 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
RIPK1-201ENST00000259808 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
RIPK1-201ENST00000259808 TMC1Q8TDI8 760 aa20.74■□□□□ 0.91
RIPK1-201ENST00000259808 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
RIPK1-201ENST00000259808 ANP32AP39687 249 aaKnown RBP20.69■□□□□ 0.9
RIPK1-201ENST00000259808 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
RIPK1-201ENST00000259808 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
RIPK1-201ENST00000259808 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
RIPK1-201ENST00000259808 RGL3Q3MIN7 710 aa20.67■□□□□ 0.9
RIPK1-201ENST00000259808 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
RIPK1-201ENST00000259808 FOXD1Q16676 465 aa20.65■□□□□ 0.9
RIPK1-201ENST00000259808 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
RIPK1-201ENST00000259808 CCNB3Q8WWL7 1395 aa20.62■□□□□ 0.89
RIPK1-201ENST00000259808 CUX2O14529 1486 aa20.59■□□□□ 0.89
RIPK1-201ENST00000259808 VPS8Q8N3P4 1428 aa20.56■□□□□ 0.88
RIPK1-201ENST00000259808 B4GALNT3Q6L9W6 998 aa20.56■□□□□ 0.88
RIPK1-201ENST00000259808 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
RIPK1-201ENST00000259808 TSPY4P0CV99 314 aa20.53■□□□□ 0.88
RIPK1-201ENST00000259808 TSPY10P0CW01 314 aa20.53■□□□□ 0.88
RIPK1-201ENST00000259808 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
RIPK1-201ENST00000259808 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
RIPK1-201ENST00000259808 ARXQ96QS3 562 aa20.51■□□□□ 0.87
RIPK1-201ENST00000259808 SLC24A1O60721 1099 aa20.5■□□□□ 0.87
RIPK1-201ENST00000259808 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
RIPK1-201ENST00000259808 RAB3GAP2Q9H2M9 1393 aa20.47■□□□□ 0.87
RIPK1-201ENST00000259808 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
RIPK1-201ENST00000259808 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
RIPK1-201ENST00000259808 SMARCA4P51532 1647 aa20.45■□□□□ 0.86
RIPK1-201ENST00000259808 ZBTB47Q9UFB7 747 aaPredicted RBP20.45■□□□□ 0.86
RIPK1-201ENST00000259808 PLPPR3Q6T4P5 718 aa20.42■□□□□ 0.86
RIPK1-201ENST00000259808 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
RIPK1-201ENST00000259808 HSPA5P11021 654 aaKnown RBP20.38■□□□□ 0.85
RIPK1-201ENST00000259808 CARD11Q9BXL7 1154 aa20.38■□□□□ 0.85
RIPK1-201ENST00000259808 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
RIPK1-201ENST00000259808 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
RIPK1-201ENST00000259808 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
RIPK1-201ENST00000259808 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.85
RIPK1-201ENST00000259808 WDR43Q15061 677 aaKnown RBP eCLIP20.33■□□□□ 0.85
RIPK1-201ENST00000259808 SMARCA2P51531 1590 aa20.33■□□□□ 0.84
RIPK1-201ENST00000259808 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
RIPK1-201ENST00000259808 PLEKHD1A6NEE1 506 aa20.3■□□□□ 0.84
RIPK1-201ENST00000259808 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
RIPK1-201ENST00000259808 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
RIPK1-201ENST00000259808 PPP1R15AO75807 674 aaPredicted RBP20.3■□□□□ 0.84
RIPK1-201ENST00000259808 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
RIPK1-201ENST00000259808 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
RIPK1-201ENST00000259808 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
RIPK1-201ENST00000259808 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
RIPK1-201ENST00000259808 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
RIPK1-201ENST00000259808 TNNT2P45379 298 aaPredicted RBP20.25■□□□□ 0.83
RIPK1-201ENST00000259808 RTN4Q9NQC3 1192 aaKnown RBP20.24■□□□□ 0.83
RIPK1-201ENST00000259808 PPP4R2Q9NY27 417 aa20.24■□□□□ 0.83
RIPK1-201ENST00000259808 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
RIPK1-201ENST00000259808 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
RIPK1-201ENST00000259808 L3MBTL2Q969R5 705 aa20.2■□□□□ 0.82
RIPK1-201ENST00000259808 RGS3P49796 1198 aa20.2■□□□□ 0.82
RIPK1-201ENST00000259808 NEFMP07197 916 aa20.19■□□□□ 0.82
RIPK1-201ENST00000259808 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
RIPK1-201ENST00000259808 PLEKHG5O94827 1062 aa20.17■□□□□ 0.82
RIPK1-201ENST00000259808 FHAD1B1AJZ9 1412 aa20.17■□□□□ 0.82
RIPK1-201ENST00000259808 MPHOSPH9Q99550 1183 aa20.16■□□□□ 0.82
RIPK1-201ENST00000259808 PKD2Q13563 968 aa20.16■□□□□ 0.82
RIPK1-201ENST00000259808 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
RIPK1-201ENST00000259808 HSP90AA1P07900 732 aaKnown RBP20.13■□□□□ 0.81
RIPK1-201ENST00000259808 NPM1P06748 294 aaKnown RBP eCLIP20.12■□□□□ 0.81
RIPK1-201ENST00000259808 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
RIPK1-201ENST00000259808 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
RIPK1-201ENST00000259808 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
RIPK1-201ENST00000259808 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
RIPK1-201ENST00000259808 IGF1RP08069 1367 aa20.07■□□□□ 0.8
RIPK1-201ENST00000259808 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
RIPK1-201ENST00000259808 FRAT1Q92837 279 aaPredicted RBP20.06■□□□□ 0.8
RIPK1-201ENST00000259808 UPF2Q9HAU5 1272 aaKnown RBP20.05■□□□□ 0.8
RIPK1-201ENST00000259808 TIMELESSQ9UNS1 1208 aa20.05■□□□□ 0.8
RIPK1-201ENST00000259808 NOP58Q9Y2X3 529 aaKnown RBP20.04■□□□□ 0.8
RIPK1-201ENST00000259808 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
RIPK1-201ENST00000259808 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
RIPK1-201ENST00000259808 SAFB2Q14151 953 aaKnown RBP eCLIP20■□□□□ 0.79
RIPK1-201ENST00000259808 NESP48681 1621 aa20■□□□□ 0.79
RIPK1-201ENST00000259808 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
RIPK1-201ENST00000259808 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
RIPK1-201ENST00000259808 DEKP35659 375 aaKnown RBP19.95■□□□□ 0.78
RIPK1-201ENST00000259808 HNRNPMP52272 730 aaKnown RBP eCLIP19.94■□□□□ 0.783e-7■■■■□ 24.6
RIPK1-201ENST00000259808 ESF1Q9H501 851 aaKnown RBP19.93■□□□□ 0.78
RIPK1-201ENST00000259808 PHLDB1Q86UU1 1377 aa19.92■□□□□ 0.78
RIPK1-201ENST00000259808 NUP155O75694 1391 aa19.92■□□□□ 0.78
RIPK1-201ENST00000259808 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
RIPK1-201ENST00000259808 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
RIPK1-201ENST00000259808 SPRYD3Q8NCJ5 442 aa19.89■□□□□ 0.78
RIPK1-201ENST00000259808 JPH4Q96JJ6 628 aa19.89■□□□□ 0.78
RIPK1-201ENST00000259808 ST20-MTHFSA0A0A6YYL1 179 aa19.89■□□□□ 0.77
RIPK1-201ENST00000259808 PLIN1O60240 522 aa19.88■□□□□ 0.77
RIPK1-201ENST00000259808 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
RIPK1-201ENST00000259808 KIF21BO75037 1637 aa19.87■□□□□ 0.77
RIPK1-201ENST00000259808 TPRNQ4KMQ1 711 aa19.87■□□□□ 0.77
RIPK1-201ENST00000259808 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
RIPK1-201ENST00000259808 RCAN3Q9UKA8 241 aa19.86■□□□□ 0.77
RIPK1-201ENST00000259808 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
RIPK1-201ENST00000259808 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms