RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 CEP170Q5SW79 1584 aa28.44■■■□□ 2.14
CCDC115-201ENST00000259229 NUP160Q12769 1436 aa28.4■■■□□ 2.14
CCDC115-201ENST00000259229 IQGAP2Q13576 1575 aa28.39■■■□□ 2.14
CCDC115-201ENST00000259229 ARHGAP35Q9NRY4 1499 aa28.38■■■□□ 2.13
CCDC115-201ENST00000259229 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
CCDC115-201ENST00000259229 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
CCDC115-201ENST00000259229 KIAA0586Q9BVV6 1533 aa28.34■■■□□ 2.13
CCDC115-201ENST00000259229 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
CCDC115-201ENST00000259229 SAMD9Q5K651 1589 aa28.32■■■□□ 2.12
CCDC115-201ENST00000259229 EFCAB5A4FU69 1503 aa28.31■■■□□ 2.12
CCDC115-201ENST00000259229 FBLN2P98095 1184 aa28.3■■■□□ 2.12
CCDC115-201ENST00000259229 UGGT2Q9NYU1 1516 aa28.26■■■□□ 2.11
CCDC115-201ENST00000259229 VPS8Q8N3P4 1428 aa28.22■■■□□ 2.11
CCDC115-201ENST00000259229 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
CCDC115-201ENST00000259229 CLASP1Q7Z460 1538 aa28.14■■■□□ 2.1
CCDC115-201ENST00000259229 DISP1Q96F81 1524 aa28.14■■■□□ 2.1
CCDC115-201ENST00000259229 KIAA0556O60303 1618 aa28.13■■■□□ 2.09
CCDC115-201ENST00000259229 SHROOM2Q13796 1616 aa28.12■■■□□ 2.09
CCDC115-201ENST00000259229 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
CCDC115-201ENST00000259229 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
CCDC115-201ENST00000259229 PCF11O94913 1555 aaKnown RBP28.04■■■□□ 2.08
CCDC115-201ENST00000259229 JPH4Q96JJ6 628 aa28.02■■■□□ 2.08
CCDC115-201ENST00000259229 FMN1Q68DA7 1419 aa27.98■■■□□ 2.07
CCDC115-201ENST00000259229 FYCO1Q9BQS8 1478 aa27.93■■■□□ 2.06
CCDC115-201ENST00000259229 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
CCDC115-201ENST00000259229 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
CCDC115-201ENST00000259229 CASKIN1Q8WXD9 1431 aa27.92■■■□□ 2.06
CCDC115-201ENST00000259229 ERCC6L2Q5T890 1561 aa27.91■■■□□ 2.06
CCDC115-201ENST00000259229 LRRIQ1Q96JM4 1722 aa27.89■■■□□ 2.06
CCDC115-201ENST00000259229 CFAP43Q8NDM7 1665 aa27.86■■■□□ 2.05
CCDC115-201ENST00000259229 TIAM1Q13009 1591 aa27.83■■■□□ 2.05
CCDC115-201ENST00000259229 MAP3K1Q13233 1512 aa27.83■■■□□ 2.05
CCDC115-201ENST00000259229 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
CCDC115-201ENST00000259229 HECW1Q76N89 1606 aa27.8■■■□□ 2.04
CCDC115-201ENST00000259229 RAPGEF6Q8TEU7 1601 aa27.8■■■□□ 2.04
CCDC115-201ENST00000259229 PPARGC1BQ86YN6 1023 aaKnown RBP27.77■■■□□ 2.04
CCDC115-201ENST00000259229 ABCA8O94911 1581 aa27.75■■■□□ 2.03
CCDC115-201ENST00000259229 PLB1Q6P1J6 1458 aa27.74■■■□□ 2.03
CCDC115-201ENST00000259229 NUP153P49790 1475 aaKnown RBP27.71■■■□□ 2.03
CCDC115-201ENST00000259229 APLP2Q06481 763 aa27.69■■■□□ 2.02
CCDC115-201ENST00000259229 PTPRGP23470 1445 aa27.68■■■□□ 2.02
CCDC115-201ENST00000259229 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
CCDC115-201ENST00000259229 EPRSP07814 1512 aaKnown RBP27.68■■■□□ 2.02
CCDC115-201ENST00000259229 KANK4Q5T7N3 995 aaPredicted RBP27.67■■■□□ 2.02
CCDC115-201ENST00000259229 TTBK1Q5TCY1 1321 aaPredicted RBP27.67■■■□□ 2.02
CCDC115-201ENST00000259229 LRRC9Q6ZRR7 1453 aa27.66■■■□□ 2.02
CCDC115-201ENST00000259229 CDK13Q14004 1512 aaKnown RBP27.65■■■□□ 2.02
CCDC115-201ENST00000259229 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
CCDC115-201ENST00000259229 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
CCDC115-201ENST00000259229 UACAQ9BZF9 1416 aa27.56■■■□□ 2
CCDC115-201ENST00000259229 ABCC2Q92887 1545 aa27.55■■■□□ 2
CCDC115-201ENST00000259229 EHBP1L1Q8N3D4 1523 aa27.53■■■□□ 2
CCDC115-201ENST00000259229 ARHGEF11O15085 1522 aa27.51■■□□□ 1.99
CCDC115-201ENST00000259229 UHRF1BP1LA0JNW5 1464 aa27.5■■□□□ 1.99
CCDC115-201ENST00000259229 ATP10BO94823 1461 aa27.5■■□□□ 1.99
CCDC115-201ENST00000259229 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
CCDC115-201ENST00000259229 ARID3CA6NKF2 412 aa27.48■■□□□ 1.99
CCDC115-201ENST00000259229 ADCY10Q96PN6 1610 aa27.47■■□□□ 1.99
CCDC115-201ENST00000259229 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
CCDC115-201ENST00000259229 SUPT6HQ7KZ85 1726 aaKnown RBP27.44■■□□□ 1.98
CCDC115-201ENST00000259229 RIMBP3CA6NJZ7 1639 aa27.43■■□□□ 1.98
CCDC115-201ENST00000259229 RIMBP3BA6NNM3 1639 aa27.43■■□□□ 1.98
CCDC115-201ENST00000259229 RIMBP3Q9UFD9 1639 aa27.43■■□□□ 1.98
CCDC115-201ENST00000259229 ZCCHC11Q5TAX3 1644 aaKnown RBP27.4■■□□□ 1.98
CCDC115-201ENST00000259229 KDM5BQ9UGL1 1544 aa27.4■■□□□ 1.98
CCDC115-201ENST00000259229 PHLDB1Q86UU1 1377 aa27.38■■□□□ 1.97
CCDC115-201ENST00000259229 NCOA2Q15596 1464 aa27.37■■□□□ 1.97
CCDC115-201ENST00000259229 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
CCDC115-201ENST00000259229 TROQ12816 1431 aaPredicted RBP27.36■■□□□ 1.97
CCDC115-201ENST00000259229 RRBP1Q9P2E9 1410 aaKnown RBP27.34■■□□□ 1.97
CCDC115-201ENST00000259229 KIF14Q15058 1648 aa27.33■■□□□ 1.97
CCDC115-201ENST00000259229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
CCDC115-201ENST00000259229 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
CCDC115-201ENST00000259229 CDK11AQ9UQ88 783 aaPredicted RBP27.28■■□□□ 1.96
CCDC115-201ENST00000259229 MYOM3Q5VTT5 1437 aa27.23■■□□□ 1.95
CCDC115-201ENST00000259229 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
CCDC115-201ENST00000259229 ABCC10Q5T3U5 1492 aa27.2■■□□□ 1.95
CCDC115-201ENST00000259229 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.95
CCDC115-201ENST00000259229 PLEKHD1A6NEE1 506 aa27.2■■□□□ 1.95
CCDC115-201ENST00000259229 ITSN2Q9NZM3 1697 aa27.16■■□□□ 1.94
CCDC115-201ENST00000259229 CDC42BPAQ5VT25 1732 aa27.15■■□□□ 1.94
CCDC115-201ENST00000259229 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
CCDC115-201ENST00000259229 TTC37Q6PGP7 1564 aa27.13■■□□□ 1.93
CCDC115-201ENST00000259229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
CCDC115-201ENST00000259229 WDR7Q9Y4E6 1490 aa27.12■■□□□ 1.93
CCDC115-201ENST00000259229 GPATCH8Q9UKJ3 1502 aaKnown RBP27.11■■□□□ 1.93
CCDC115-201ENST00000259229 TCOF1Q13428 1488 aaKnown RBP27.1■■□□□ 1.93
CCDC115-201ENST00000259229 MIA2Q96PC5 1412 aa27.1■■□□□ 1.93
CCDC115-201ENST00000259229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.93
CCDC115-201ENST00000259229 CYB5RLQ6IPT4 315 aa27.08■■□□□ 1.93
CCDC115-201ENST00000259229 ASXL2Q76L83 1435 aa27.08■■□□□ 1.93
CCDC115-201ENST00000259229 PREX2Q70Z35 1606 aa27.07■■□□□ 1.92
CCDC115-201ENST00000259229 CDC42BPBQ9Y5S2 1711 aa27.04■■□□□ 1.92
CCDC115-201ENST00000259229 MAPKBP1O60336 1514 aa27.03■■□□□ 1.92
CCDC115-201ENST00000259229 MYO5CQ9NQX4 1742 aa27.02■■□□□ 1.92
CCDC115-201ENST00000259229 ABCA9Q8IUA7 1624 aa27■■□□□ 1.91
CCDC115-201ENST00000259229 NPM1P06748 294 aaKnown RBP eCLIP26.97■■□□□ 1.91
CCDC115-201ENST00000259229 FAM50AQ14320 339 aaKnown RBP26.97■■□□□ 1.91
CCDC115-201ENST00000259229 CAMSAP2Q08AD1 1489 aa26.96■■□□□ 1.91
CCDC115-201ENST00000259229 KCNH8Q96L42 1107 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms