RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 RUSC2Q8N2Y8 1516 aa33.02■■■□□ 2.88
TM6SF1-201ENST00000258909 CUL7Q14999 1698 aa32.95■■■□□ 2.87
TM6SF1-201ENST00000258909 KIAA0586Q9BVV6 1533 aa32.85■■■□□ 2.85
TM6SF1-201ENST00000258909 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
TM6SF1-201ENST00000258909 ADCY10Q96PN6 1610 aa32.64■■■□□ 2.82
TM6SF1-201ENST00000258909 NPM1P06748 294 aaKnown RBP eCLIP32.63■■■□□ 2.81
TM6SF1-201ENST00000258909 TTBK1Q5TCY1 1321 aaPredicted RBP32.63■■■□□ 2.81
TM6SF1-201ENST00000258909 KIF13AQ9H1H9 1805 aa32.63■■■□□ 2.81
TM6SF1-201ENST00000258909 IQGAP2Q13576 1575 aa32.58■■■□□ 2.81
TM6SF1-201ENST00000258909 RAPGEF2Q9Y4G8 1499 aa32.56■■■□□ 2.8
TM6SF1-201ENST00000258909 PTPRGP23470 1445 aa32.55■■■□□ 2.8
TM6SF1-201ENST00000258909 CARMIL2Q6F5E8 1435 aa32.52■■■□□ 2.8
TM6SF1-201ENST00000258909 FAM69CQ0P6D2 419 aa32.5■■■□□ 2.79
TM6SF1-201ENST00000258909 MAPKBP1O60336 1514 aa32.5■■■□□ 2.79
TM6SF1-201ENST00000258909 TNIKQ9UKE5 1360 aa32.49■■■□□ 2.79
TM6SF1-201ENST00000258909 ABCC10Q5T3U5 1492 aa32.48■■■□□ 2.79
TM6SF1-201ENST00000258909 DISP1Q96F81 1524 aa32.43■■■□□ 2.78
TM6SF1-201ENST00000258909 DIP2BQ9P265 1576 aa32.41■■■□□ 2.78
TM6SF1-201ENST00000258909 UGGT2Q9NYU1 1516 aa32.36■■■□□ 2.77
TM6SF1-201ENST00000258909 ABCC2Q92887 1545 aa32.33■■■□□ 2.77
TM6SF1-201ENST00000258909 CTTNBP2Q8WZ74 1663 aa32.3■■■□□ 2.76
TM6SF1-201ENST00000258909 KIAA0556O60303 1618 aa32.29■■■□□ 2.76
TM6SF1-201ENST00000258909 UACAQ9BZF9 1416 aa32.29■■■□□ 2.76
TM6SF1-201ENST00000258909 TSPOAP1O95153 1857 aa32.27■■■□□ 2.76
TM6SF1-201ENST00000258909 PRXQ9BXM0 1461 aa32.26■■■□□ 2.76
TM6SF1-201ENST00000258909 UHRF1BP1LA0JNW5 1464 aa32.26■■■□□ 2.75
TM6SF1-201ENST00000258909 ASXL2Q76L83 1435 aa32.22■■■□□ 2.75
TM6SF1-201ENST00000258909 AEBP2Q6ZN18 517 aaPredicted RBP32.21■■■□□ 2.75
TM6SF1-201ENST00000258909 PLB1Q6P1J6 1458 aa32.16■■■□□ 2.74
TM6SF1-201ENST00000258909 KDM5BQ9UGL1 1544 aa32.13■■■□□ 2.73
TM6SF1-201ENST00000258909 ZCCHC11Q5TAX3 1644 aaKnown RBP32.11■■■□□ 2.73
TM6SF1-201ENST00000258909 GOLGA3Q08378 1498 aa32.11■■■□□ 2.73
TM6SF1-201ENST00000258909 CSRNP3Q8WYN3 585 aa32.1■■■□□ 2.73
TM6SF1-201ENST00000258909 KDM6BO15054 1643 aa32.09■■■□□ 2.73
TM6SF1-201ENST00000258909 GLI2P10070 1586 aa32.06■■■□□ 2.72
TM6SF1-201ENST00000258909 EPRSP07814 1512 aaKnown RBP32.02■■■□□ 2.72
TM6SF1-201ENST00000258909 PPRC1Q5VV67 1664 aaKnown RBP32.01■■■□□ 2.71
TM6SF1-201ENST00000258909 P3H3Q8IVL6 736 aa32■■■□□ 2.71
TM6SF1-201ENST00000258909 ABCA8O94911 1581 aa31.98■■■□□ 2.71
TM6SF1-201ENST00000258909 FAM9AQ8IZU1 332 aaPredicted RBP31.97■■■□□ 2.71
TM6SF1-201ENST00000258909 MAP3K4Q9Y6R4 1608 aa31.92■■■□□ 2.7
TM6SF1-201ENST00000258909 WDR7Q9Y4E6 1490 aa31.91■■■□□ 2.7
TM6SF1-201ENST00000258909 EEA1Q15075 1411 aa31.91■■■□□ 2.7
TM6SF1-201ENST00000258909 ARID3CA6NKF2 412 aa31.87■■■□□ 2.69
TM6SF1-201ENST00000258909 RANGAP1P46060 587 aaPredicted RBP31.86■■■□□ 2.69
TM6SF1-201ENST00000258909 KCNH8Q96L42 1107 aa31.85■■■□□ 2.69
TM6SF1-201ENST00000258909 SAMD9Q5K651 1589 aa31.83■■■□□ 2.69
TM6SF1-201ENST00000258909 COL17A1Q9UMD9 1497 aaPredicted RBP31.8■■■□□ 2.68
TM6SF1-201ENST00000258909 TEX14Q8IWB6 1497 aa31.79■■■□□ 2.68
TM6SF1-201ENST00000258909 ATP10BO94823 1461 aa31.74■■■□□ 2.67
TM6SF1-201ENST00000258909 KDM4FA0A1W2PPD8 638 aa31.73■■■□□ 2.67
TM6SF1-201ENST00000258909 CD109Q6YHK3 1445 aa31.73■■■□□ 2.67
TM6SF1-201ENST00000258909 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
TM6SF1-201ENST00000258909 CFAP43Q8NDM7 1665 aa31.71■■■□□ 2.67
TM6SF1-201ENST00000258909 KIF21BO75037 1637 aa31.69■■■□□ 2.66
TM6SF1-201ENST00000258909 EHMT2Q96KQ7 1210 aa31.69■■■□□ 2.66
TM6SF1-201ENST00000258909 FHOD3Q2V2M9 1422 aa31.69■■■□□ 2.66
TM6SF1-201ENST00000258909 RAPGEF6Q8TEU7 1601 aa31.69■■■□□ 2.66
TM6SF1-201ENST00000258909 MAGI3Q5TCQ9 1506 aa31.65■■■□□ 2.66
TM6SF1-201ENST00000258909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.63■■■□□ 2.65
TM6SF1-201ENST00000258909 HNRNPUL2Q1KMD3 747 aaKnown RBP31.63■■■□□ 2.65
TM6SF1-201ENST00000258909 NUP153P49790 1475 aaKnown RBP31.58■■■□□ 2.65
TM6SF1-201ENST00000258909 UBTFP17480 764 aaKnown RBP31.54■■■□□ 2.64
TM6SF1-201ENST00000258909 EFCAB5A4FU69 1503 aa31.52■■■□□ 2.64
TM6SF1-201ENST00000258909 ABCA9Q8IUA7 1624 aa31.5■■■□□ 2.63
TM6SF1-201ENST00000258909 ADGRL1O94910 1474 aa31.5■■■□□ 2.63
TM6SF1-201ENST00000258909 PLEKHD1A6NEE1 506 aa31.4■■■□□ 2.62
TM6SF1-201ENST00000258909 ARAP3Q8WWN8 1544 aa31.39■■■□□ 2.62
TM6SF1-201ENST00000258909 ARHGAP35Q9NRY4 1499 aa31.33■■■□□ 2.61
TM6SF1-201ENST00000258909 CDK13Q14004 1512 aaKnown RBP31.33■■■□□ 2.61
TM6SF1-201ENST00000258909 ATP1B4Q9UN42 357 aaPredicted RBP31.33■■■□□ 2.61
TM6SF1-201ENST00000258909 RAPGEF3O95398 923 aa31.32■■■□□ 2.6
TM6SF1-201ENST00000258909 PHLDB1Q86UU1 1377 aa31.31■■■□□ 2.6
TM6SF1-201ENST00000258909 NEO1Q92859 1461 aa31.3■■■□□ 2.6
TM6SF1-201ENST00000258909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.26■■■□□ 2.59
TM6SF1-201ENST00000258909 FMN1Q68DA7 1419 aa31.25■■■□□ 2.59
TM6SF1-201ENST00000258909 TTC37Q6PGP7 1564 aa31.22■■■□□ 2.59
TM6SF1-201ENST00000258909 HECW1Q76N89 1606 aa31.2■■■□□ 2.58
TM6SF1-201ENST00000258909 FRMPD1Q5SYB0 1578 aa31.2■■■□□ 2.58
TM6SF1-201ENST00000258909 FANCAO15360 1455 aa31.17■■■□□ 2.58
TM6SF1-201ENST00000258909 AKNAQ7Z591 1439 aa31.15■■■□□ 2.58
TM6SF1-201ENST00000258909 DENND4BO75064 1496 aaPredicted RBP31.11■■■□□ 2.57
TM6SF1-201ENST00000258909 CFAP74Q9C0B2 1584 aa31.1■■■□□ 2.57
TM6SF1-201ENST00000258909 RICTORQ6R327 1708 aa31.09■■■□□ 2.57
TM6SF1-201ENST00000258909 LRRIQ1Q96JM4 1722 aa31.09■■■□□ 2.57
TM6SF1-201ENST00000258909 CDK11AQ9UQ88 783 aaPredicted RBP31.07■■■□□ 2.56
TM6SF1-201ENST00000258909 PLCH2O75038 1416 aa31.04■■■□□ 2.56
TM6SF1-201ENST00000258909 KIF14Q15058 1648 aa31.04■■■□□ 2.56
TM6SF1-201ENST00000258909 ARID4BQ4LE39 1312 aaPredicted RBP31.03■■■□□ 2.56
TM6SF1-201ENST00000258909 HECW2Q9P2P5 1572 aa31.01■■■□□ 2.55
TM6SF1-201ENST00000258909 MYO5CQ9NQX4 1742 aa30.99■■■□□ 2.55
TM6SF1-201ENST00000258909 PCF11O94913 1555 aaKnown RBP30.99■■■□□ 2.55
TM6SF1-201ENST00000258909 TROQ12816 1431 aaPredicted RBP30.99■■■□□ 2.55
TM6SF1-201ENST00000258909 ADAMTSL3P82987 1691 aa30.98■■■□□ 2.55
TM6SF1-201ENST00000258909 ARHGEF40Q8TER5 1519 aa30.98■■■□□ 2.55
TM6SF1-201ENST00000258909 SCAPERQ9BY12 1400 aa30.97■■■□□ 2.55
TM6SF1-201ENST00000258909 CASKIN1Q8WXD9 1431 aa30.95■■■□□ 2.55
TM6SF1-201ENST00000258909 BCORL1Q5H9F3 1711 aa30.95■■■□□ 2.54
TM6SF1-201ENST00000258909 EFCAB2Q5VUJ9 269 aa30.94■■■□□ 2.54
TM6SF1-201ENST00000258909 CLIP1P30622 1438 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms