RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 DRC7Q8IY82 874 aa12.5□□□□□ -0.41
PCDH19-201ENST00000255531 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
PCDH19-201ENST00000255531 GOLGA6L4A6NEF3 574 aa12.49□□□□□ -0.41
PCDH19-201ENST00000255531 HSP90AA2PQ14568 343 aaPredicted RBP12.48□□□□□ -0.41
PCDH19-201ENST00000255531 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
PCDH19-201ENST00000255531 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
PCDH19-201ENST00000255531 DEKP35659 375 aaKnown RBP12.45□□□□□ -0.42
PCDH19-201ENST00000255531 STK11IPQ8N1F8 1099 aa12.44□□□□□ -0.42
PCDH19-201ENST00000255531 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
PCDH19-201ENST00000255531 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
PCDH19-201ENST00000255531 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
PCDH19-201ENST00000255531 ARID3AQ99856 593 aa12.42□□□□□ -0.42
PCDH19-201ENST00000255531 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
PCDH19-201ENST00000255531 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
PCDH19-201ENST00000255531 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
PCDH19-201ENST00000255531 RSPH6AQ9H0K4 717 aa12.39□□□□□ -0.43
PCDH19-201ENST00000255531 LAS1LQ9Y4W2 734 aaKnown RBP12.39□□□□□ -0.43
PCDH19-201ENST00000255531 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
PCDH19-201ENST00000255531 GOLGA6L3A6NEY3 463 aa12.39□□□□□ -0.43
PCDH19-201ENST00000255531 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
PCDH19-201ENST00000255531 PRM3Q9NNZ6 103 aa12.38□□□□□ -0.43
PCDH19-201ENST00000255531 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
PCDH19-201ENST00000255531 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
PCDH19-201ENST00000255531 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
PCDH19-201ENST00000255531 NOM1Q5C9Z4 860 aaKnown RBP12.34□□□□□ -0.43
PCDH19-201ENST00000255531 GPS2Q13227 327 aa12.32□□□□□ -0.44
PCDH19-201ENST00000255531 ZNF771Q7L3S4 317 aaPredicted RBP12.32□□□□□ -0.44
PCDH19-201ENST00000255531 CLSTN1O94985 981 aa12.32□□□□□ -0.44
PCDH19-201ENST00000255531 PODXL2Q9NZ53 605 aa12.31□□□□□ -0.44
PCDH19-201ENST00000255531 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
PCDH19-201ENST00000255531 HSCBQ8IWL3 235 aa12.3□□□□□ -0.44
PCDH19-201ENST00000255531 FGD1P98174 961 aa12.3□□□□□ -0.44
PCDH19-201ENST00000255531 TPM4P67936 248 aa12.29□□□□□ -0.44
PCDH19-201ENST00000255531 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
PCDH19-201ENST00000255531 TEX35Q5T0J7 233 aa12.28□□□□□ -0.44
PCDH19-201ENST00000255531 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
PCDH19-201ENST00000255531 IRX6P78412 446 aaPredicted RBP12.27□□□□□ -0.45
PCDH19-201ENST00000255531 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
PCDH19-201ENST00000255531 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
PCDH19-201ENST00000255531 HMMRO75330 724 aa12.25□□□□□ -0.45
PCDH19-201ENST00000255531 NEFHP12036 1026 aa12.25□□□□□ -0.45
PCDH19-201ENST00000255531 TAF7LQ5H9L4 462 aa12.25□□□□□ -0.45
PCDH19-201ENST00000255531 GBP4Q96PP9 640 aa12.25□□□□□ -0.45
PCDH19-201ENST00000255531 CFAP44Q96MT7 982 aa12.24□□□□□ -0.45
PCDH19-201ENST00000255531 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
PCDH19-201ENST00000255531 MRS2Q9HD23 443 aa12.22□□□□□ -0.45
PCDH19-201ENST00000255531 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
PCDH19-201ENST00000255531 DDX10Q13206 875 aaKnown RBP12.22□□□□□ -0.45
PCDH19-201ENST00000255531 ZBTB7CA1YPR0 619 aa12.21□□□□□ -0.45
PCDH19-201ENST00000255531 MCCP23508 829 aa12.21□□□□□ -0.45
PCDH19-201ENST00000255531 CCDC70Q6NSX1 233 aa12.21□□□□□ -0.45
PCDH19-201ENST00000255531 KCNJ4P48050 445 aa12.21□□□□□ -0.45
PCDH19-201ENST00000255531 MAP7D2Q96T17 732 aa12.21□□□□□ -0.46
PCDH19-201ENST00000255531 HSP90B1P14625 803 aaKnown RBP12.21□□□□□ -0.46
PCDH19-201ENST00000255531 CEP89Q96ST8 783 aa12.2□□□□□ -0.46
PCDH19-201ENST00000255531 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
PCDH19-201ENST00000255531 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
PCDH19-201ENST00000255531 NAP1L2Q9ULW6 460 aaPredicted RBP12.2□□□□□ -0.46
PCDH19-201ENST00000255531 TPM3P06753 285 aa12.19□□□□□ -0.46
PCDH19-201ENST00000255531 CCDC34Q96HJ3 373 aa12.19□□□□□ -0.46
PCDH19-201ENST00000255531 GNL2Q13823 731 aaKnown RBP12.18□□□□□ -0.46
PCDH19-201ENST00000255531 PKNOX2Q96KN3 472 aa12.18□□□□□ -0.46
PCDH19-201ENST00000255531 CALD1Q05682 793 aaKnown RBP12.18□□□□□ -0.46
PCDH19-201ENST00000255531 PHF14O94880 888 aa12.18□□□□□ -0.46
PCDH19-201ENST00000255531 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
PCDH19-201ENST00000255531 CWC15Q9P013 229 aaKnown RBP12.16□□□□□ -0.46
PCDH19-201ENST00000255531 PPP4R2Q9NY27 417 aa12.15□□□□□ -0.47
PCDH19-201ENST00000255531 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
PCDH19-201ENST00000255531 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
PCDH19-201ENST00000255531 MS4A1P11836 297 aa12.12□□□□□ -0.47
PCDH19-201ENST00000255531 CDR1P51861 262 aa12.11□□□□□ -0.47
PCDH19-201ENST00000255531 MTERF4Q7Z6M4 381 aaKnown RBP12.1□□□□□ -0.47
PCDH19-201ENST00000255531 DCTN1Q14203 1278 aa12.1□□□□□ -0.47
PCDH19-201ENST00000255531 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
PCDH19-201ENST00000255531 RGS3P49796 1198 aa12.09□□□□□ -0.47
PCDH19-201ENST00000255531 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
PCDH19-201ENST00000255531 DYDC1Q8WWB3 177 aa12.08□□□□□ -0.48
PCDH19-201ENST00000255531 AK7Q96M32 723 aa12.08□□□□□ -0.48
PCDH19-201ENST00000255531 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
PCDH19-201ENST00000255531 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
PCDH19-201ENST00000255531 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
PCDH19-201ENST00000255531 PDE4CQ08493 712 aa12.07□□□□□ -0.48
PCDH19-201ENST00000255531 H0YHG0 523 aa12.07□□□□□ -0.48
PCDH19-201ENST00000255531 ACBD3Q9H3P7 528 aa12.07□□□□□ -0.48
PCDH19-201ENST00000255531 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
PCDH19-201ENST00000255531 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
PCDH19-201ENST00000255531 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
PCDH19-201ENST00000255531 CCAR2Q8N163 923 aaKnown RBP12.05□□□□□ -0.48
PCDH19-201ENST00000255531 A0A0G2JS52 829 aa12.05□□□□□ -0.48
PCDH19-201ENST00000255531 RUFY1Q96T51 708 aa12.05□□□□□ -0.48
PCDH19-201ENST00000255531 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
PCDH19-201ENST00000255531 HSP90AB3PQ58FF7 597 aa12.03□□□□□ -0.48
PCDH19-201ENST00000255531 INCENPQ9NQS7 918 aa12.02□□□□□ -0.48
PCDH19-201ENST00000255531 TPM1P09493 284 aa12.02□□□□□ -0.49
PCDH19-201ENST00000255531 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCDH19-201ENST00000255531 ZRSR2Q15696 482 aaKnown RBP12.01□□□□□ -0.49
PCDH19-201ENST00000255531 PLCD4Q9BRC7 762 aa12.01□□□□□ -0.49
PCDH19-201ENST00000255531 KIAA1211Q6ZU35 1233 aa12.01□□□□□ -0.49
PCDH19-201ENST00000255531 ARGLU1Q9NWB6 273 aaPredicted RBP12.01□□□□□ -0.49
PCDH19-201ENST00000255531 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms