RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
CCNA1-201ENST00000255465 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
CCNA1-201ENST00000255465 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
CCNA1-201ENST00000255465 IGF1RP08069 1367 aa17.91■□□□□ 0.46
CCNA1-201ENST00000255465 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
CCNA1-201ENST00000255465 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
CCNA1-201ENST00000255465 CUL7Q14999 1698 aa17.89■□□□□ 0.46
CCNA1-201ENST00000255465 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
CCNA1-201ENST00000255465 CLASP1Q7Z460 1538 aa17.85■□□□□ 0.45
CCNA1-201ENST00000255465 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
CCNA1-201ENST00000255465 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
CCNA1-201ENST00000255465 NUP160Q12769 1436 aa17.81■□□□□ 0.44
CCNA1-201ENST00000255465 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
CCNA1-201ENST00000255465 RIMBP3CA6NJZ7 1639 aa17.77■□□□□ 0.44
CCNA1-201ENST00000255465 RIMBP3BA6NNM3 1639 aa17.77■□□□□ 0.44
CCNA1-201ENST00000255465 RIMBP3Q9UFD9 1639 aa17.77■□□□□ 0.44
CCNA1-201ENST00000255465 ARHGEF11O15085 1522 aa17.76■□□□□ 0.43
CCNA1-201ENST00000255465 RAPGEF2Q9Y4G8 1499 aa17.72■□□□□ 0.43
CCNA1-201ENST00000255465 EEA1Q15075 1411 aa17.72■□□□□ 0.43
CCNA1-201ENST00000255465 SLC24A1O60721 1099 aa17.71■□□□□ 0.43
CCNA1-201ENST00000255465 SHROOM2Q13796 1616 aa17.7■□□□□ 0.42
CCNA1-201ENST00000255465 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
CCNA1-201ENST00000255465 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
CCNA1-201ENST00000255465 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
CCNA1-201ENST00000255465 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
CCNA1-201ENST00000255465 ERCC6L2Q5T890 1561 aa17.63■□□□□ 0.41
CCNA1-201ENST00000255465 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
CCNA1-201ENST00000255465 CTTNBP2Q8WZ74 1663 aa17.61■□□□□ 0.41
CCNA1-201ENST00000255465 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
CCNA1-201ENST00000255465 PRG4Q92954 1404 aaPredicted RBP17.59■□□□□ 0.41
CCNA1-201ENST00000255465 CYB5RLQ6IPT4 315 aa17.58■□□□□ 0.41
CCNA1-201ENST00000255465 KIF21BO75037 1637 aa17.56■□□□□ 0.4
CCNA1-201ENST00000255465 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
CCNA1-201ENST00000255465 UGGT2Q9NYU1 1516 aa17.5■□□□□ 0.39
CCNA1-201ENST00000255465 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
CCNA1-201ENST00000255465 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
CCNA1-201ENST00000255465 MYT1LQ9UL68 1186 aa17.45■□□□□ 0.38
CCNA1-201ENST00000255465 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
CCNA1-201ENST00000255465 KIAA0556O60303 1618 aa17.43■□□□□ 0.38
CCNA1-201ENST00000255465 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
CCNA1-201ENST00000255465 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
CCNA1-201ENST00000255465 PTPRGP23470 1445 aa17.39■□□□□ 0.37
CCNA1-201ENST00000255465 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.37
CCNA1-201ENST00000255465 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
CCNA1-201ENST00000255465 SAMD9Q5K651 1589 aa17.35■□□□□ 0.37
CCNA1-201ENST00000255465 ADCY10Q96PN6 1610 aa17.34■□□□□ 0.37
CCNA1-201ENST00000255465 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
CCNA1-201ENST00000255465 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
CCNA1-201ENST00000255465 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.36
CCNA1-201ENST00000255465 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
CCNA1-201ENST00000255465 UACAQ9BZF9 1416 aa17.27■□□□□ 0.36
CCNA1-201ENST00000255465 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
CCNA1-201ENST00000255465 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
CCNA1-201ENST00000255465 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
CCNA1-201ENST00000255465 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
CCNA1-201ENST00000255465 PLB1Q6P1J6 1458 aa17.24■□□□□ 0.35
CCNA1-201ENST00000255465 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCNA1-201ENST00000255465 ABCA8O94911 1581 aa17.24■□□□□ 0.35
CCNA1-201ENST00000255465 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
CCNA1-201ENST00000255465 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
CCNA1-201ENST00000255465 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
CCNA1-201ENST00000255465 MAPKBP1O60336 1514 aa17.19■□□□□ 0.34
CCNA1-201ENST00000255465 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
CCNA1-201ENST00000255465 KDM5BQ9UGL1 1544 aa17.18■□□□□ 0.34
CCNA1-201ENST00000255465 ZCCHC11Q5TAX3 1644 aaKnown RBP17.18■□□□□ 0.34
CCNA1-201ENST00000255465 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
CCNA1-201ENST00000255465 LOC105371045A0A1W2PR82 267 aa17.17■□□□□ 0.34
CCNA1-201ENST00000255465 KIF13AQ9H1H9 1805 aa17.15■□□□□ 0.34
CCNA1-201ENST00000255465 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
CCNA1-201ENST00000255465 CLIP1P30622 1438 aa17.12■□□□□ 0.33
CCNA1-201ENST00000255465 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
CCNA1-201ENST00000255465 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
CCNA1-201ENST00000255465 ABCC10Q5T3U5 1492 aa17.09■□□□□ 0.33
CCNA1-201ENST00000255465 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
CCNA1-201ENST00000255465 ATP10BO94823 1461 aa17.09■□□□□ 0.33
CCNA1-201ENST00000255465 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
CCNA1-201ENST00000255465 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
CCNA1-201ENST00000255465 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
CCNA1-201ENST00000255465 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
CCNA1-201ENST00000255465 FAM69CQ0P6D2 419 aa17.05■□□□□ 0.32
CCNA1-201ENST00000255465 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
CCNA1-201ENST00000255465 HECW1Q76N89 1606 aa17.04■□□□□ 0.32
CCNA1-201ENST00000255465 WDR7Q9Y4E6 1490 aa17.03■□□□□ 0.32
CCNA1-201ENST00000255465 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.31
CCNA1-201ENST00000255465 TSPOAP1O95153 1857 aa17.01■□□□□ 0.31
CCNA1-201ENST00000255465 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
CCNA1-201ENST00000255465 PCF11O94913 1555 aaKnown RBP17.01■□□□□ 0.31
CCNA1-201ENST00000255465 GLI2P10070 1586 aa17.01■□□□□ 0.31
CCNA1-201ENST00000255465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
CCNA1-201ENST00000255465 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
CCNA1-201ENST00000255465 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
CCNA1-201ENST00000255465 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
CCNA1-201ENST00000255465 CASKIN1Q8WXD9 1431 aa16.98■□□□□ 0.31
CCNA1-201ENST00000255465 CCER1Q8TC90 406 aaPredicted RBP16.97■□□□□ 0.31
CCNA1-201ENST00000255465 KCNH8Q96L42 1107 aa16.97■□□□□ 0.31
CCNA1-201ENST00000255465 MAP3K4Q9Y6R4 1608 aa16.96■□□□□ 0.3
CCNA1-201ENST00000255465 FYCO1Q9BQS8 1478 aa16.95■□□□□ 0.3
CCNA1-201ENST00000255465 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
CCNA1-201ENST00000255465 PPRC1Q5VV67 1664 aaKnown RBP16.93■□□□□ 0.3
CCNA1-201ENST00000255465 CFAP43Q8NDM7 1665 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms