RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 KIAA0586Q9BVV6 1533 aa36.25■■■■□ 3.39
NXT1-201ENST00000254998 ARAP1Q96P48 1450 aa36.24■■■■□ 3.39
NXT1-201ENST00000254998 PRXQ9BXM0 1461 aa36.2■■■■□ 3.39
NXT1-201ENST00000254998 JPH4Q96JJ6 628 aa36.17■■■■□ 3.38
NXT1-201ENST00000254998 CSRNP3Q8WYN3 585 aa36.14■■■■□ 3.38
NXT1-201ENST00000254998 CYB5RLQ6IPT4 315 aa36.13■■■■□ 3.37
NXT1-201ENST00000254998 ERCC6L2Q5T890 1561 aa36.11■■■■□ 3.37
NXT1-201ENST00000254998 PRG4Q92954 1404 aaPredicted RBP36.09■■■■□ 3.37
NXT1-201ENST00000254998 IQGAP2Q13576 1575 aa36.03■■■■□ 3.36
NXT1-201ENST00000254998 FAM9AQ8IZU1 332 aaPredicted RBP35.93■■■■□ 3.34
NXT1-201ENST00000254998 CTTNBP2Q8WZ74 1663 aa35.91■■■■□ 3.34
NXT1-201ENST00000254998 UGGT2Q9NYU1 1516 aa35.88■■■■□ 3.33
NXT1-201ENST00000254998 CARMIL2Q6F5E8 1435 aa35.84■■■■□ 3.33
NXT1-201ENST00000254998 KIF21BO75037 1637 aa35.84■■■■□ 3.33
NXT1-201ENST00000254998 DISP1Q96F81 1524 aa35.78■■■■□ 3.32
NXT1-201ENST00000254998 TNIKQ9UKE5 1360 aa35.72■■■■□ 3.31
NXT1-201ENST00000254998 KIAA0556O60303 1618 aa35.68■■■■□ 3.3
NXT1-201ENST00000254998 PTPRGP23470 1445 aa35.68■■■■□ 3.3
NXT1-201ENST00000254998 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
NXT1-201ENST00000254998 ADCY10Q96PN6 1610 aa35.54■■■■□ 3.28
NXT1-201ENST00000254998 SAMD9Q5K651 1589 aa35.49■■■■□ 3.27
NXT1-201ENST00000254998 TTBK1Q5TCY1 1321 aaPredicted RBP35.47■■■■□ 3.27
NXT1-201ENST00000254998 UHRF1BP1LA0JNW5 1464 aa35.47■■■■□ 3.27
NXT1-201ENST00000254998 UBTFP17480 764 aaKnown RBP35.46■■■■□ 3.27
NXT1-201ENST00000254998 UACAQ9BZF9 1416 aa35.46■■■■□ 3.27
NXT1-201ENST00000254998 NPM1P06748 294 aaKnown RBP eCLIP35.4■■■■□ 3.26
NXT1-201ENST00000254998 ABCC2Q92887 1545 aa35.4■■■■□ 3.26
NXT1-201ENST00000254998 EHMT2Q96KQ7 1210 aa35.39■■■■□ 3.26
NXT1-201ENST00000254998 EFCAB5A4FU69 1503 aa35.36■■■■□ 3.25
NXT1-201ENST00000254998 MAPKBP1O60336 1514 aa35.35■■■■□ 3.25
NXT1-201ENST00000254998 TRHP20396 242 aaPredicted RBP35.33■■■■□ 3.25
NXT1-201ENST00000254998 P3H3Q8IVL6 736 aa35.32■■■■□ 3.24
NXT1-201ENST00000254998 ABCA8O94911 1581 aa35.31■■■■□ 3.24
NXT1-201ENST00000254998 PLB1Q6P1J6 1458 aa35.3■■■■□ 3.24
NXT1-201ENST00000254998 RANGAP1P46060 587 aaPredicted RBP35.28■■■■□ 3.24
NXT1-201ENST00000254998 KDM5BQ9UGL1 1544 aa35.27■■■■□ 3.24
NXT1-201ENST00000254998 FHOD3Q2V2M9 1422 aa35.23■■■■□ 3.23
NXT1-201ENST00000254998 ARHGAP35Q9NRY4 1499 aa35.16■■■■□ 3.22
NXT1-201ENST00000254998 ABCC10Q5T3U5 1492 aa35.16■■■■□ 3.22
NXT1-201ENST00000254998 ZCCHC11Q5TAX3 1644 aaKnown RBP35.15■■■■□ 3.22
NXT1-201ENST00000254998 ASXL2Q76L83 1435 aa35.13■■■■□ 3.21
NXT1-201ENST00000254998 RAPGEF6Q8TEU7 1601 aa35.11■■■■□ 3.21
NXT1-201ENST00000254998 KIF13AQ9H1H9 1805 aa35.1■■■■□ 3.21
NXT1-201ENST00000254998 DIP2BQ9P265 1576 aa35.08■■■■□ 3.21
NXT1-201ENST00000254998 FAM69CQ0P6D2 419 aa35.02■■■■□ 3.2
NXT1-201ENST00000254998 FMN1Q68DA7 1419 aa35.02■■■■□ 3.2
NXT1-201ENST00000254998 ATP10BO94823 1461 aa35.01■■■■□ 3.19
NXT1-201ENST00000254998 NUP153P49790 1475 aaKnown RBP35■■■■□ 3.19
NXT1-201ENST00000254998 CLIP1P30622 1438 aa34.97■■■■□ 3.19
NXT1-201ENST00000254998 WDR7Q9Y4E6 1490 aa34.97■■■■□ 3.19
NXT1-201ENST00000254998 GLI2P10070 1586 aa34.95■■■■□ 3.18
NXT1-201ENST00000254998 EPRSP07814 1512 aaKnown RBP34.92■■■■□ 3.18
NXT1-201ENST00000254998 ARID3CA6NKF2 412 aa34.88■■■■□ 3.17
NXT1-201ENST00000254998 LOC105371045A0A1W2PR82 267 aa34.85■■■■□ 3.17
NXT1-201ENST00000254998 HECW1Q76N89 1606 aa34.83■■■■□ 3.17
NXT1-201ENST00000254998 CEP162Q5TB80 1403 aa34.82■■■■□ 3.17
NXT1-201ENST00000254998 CASKIN1Q8WXD9 1431 aa34.76■■■■□ 3.16
NXT1-201ENST00000254998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.76■■■■□ 3.16
NXT1-201ENST00000254998 HNRNPUL2Q1KMD3 747 aaKnown RBP34.76■■■■□ 3.16
NXT1-201ENST00000254998 MAP3K4Q9Y6R4 1608 aa34.76■■■■□ 3.15
NXT1-201ENST00000254998 KCNH8Q96L42 1107 aa34.73■■■■□ 3.15
NXT1-201ENST00000254998 CDK13Q14004 1512 aaKnown RBP34.72■■■■□ 3.15
NXT1-201ENST00000254998 PCF11O94913 1555 aaKnown RBP34.71■■■■□ 3.15
NXT1-201ENST00000254998 TSPOAP1O95153 1857 aa34.71■■■■□ 3.15
NXT1-201ENST00000254998 PLEKHD1A6NEE1 506 aa34.69■■■■□ 3.14
NXT1-201ENST00000254998 PPRC1Q5VV67 1664 aaKnown RBP34.68■■■■□ 3.14
NXT1-201ENST00000254998 FYCO1Q9BQS8 1478 aa34.68■■■■□ 3.14
NXT1-201ENST00000254998 ATP1B4Q9UN42 357 aaPredicted RBP34.68■■■■□ 3.14
NXT1-201ENST00000254998 CFAP43Q8NDM7 1665 aa34.67■■■■□ 3.14
NXT1-201ENST00000254998 CD109Q6YHK3 1445 aa34.62■■■■□ 3.13
NXT1-201ENST00000254998 ABCA9Q8IUA7 1624 aa34.62■■■■□ 3.13
NXT1-201ENST00000254998 LRRIQ1Q96JM4 1722 aa34.61■■■■□ 3.13
NXT1-201ENST00000254998 CCDC18Q5T9S5 1454 aa34.61■■■■□ 3.13
NXT1-201ENST00000254998 TEX14Q8IWB6 1497 aa34.6■■■■□ 3.13
NXT1-201ENST00000254998 MAGI3Q5TCQ9 1506 aa34.6■■■■□ 3.13
NXT1-201ENST00000254998 CDK11AQ9UQ88 783 aaPredicted RBP34.59■■■■□ 3.13
NXT1-201ENST00000254998 TROQ12816 1431 aaPredicted RBP34.49■■■■□ 3.11
NXT1-201ENST00000254998 KDM6BO15054 1643 aa34.48■■■■□ 3.11
NXT1-201ENST00000254998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.46■■■■□ 3.11
NXT1-201ENST00000254998 VPS8Q8N3P4 1428 aa34.42■■■■□ 3.1
NXT1-201ENST00000254998 TTC37Q6PGP7 1564 aa34.41■■■■□ 3.1
NXT1-201ENST00000254998 KIF14Q15058 1648 aa34.39■■■■□ 3.1
NXT1-201ENST00000254998 PHLDB1Q86UU1 1377 aa34.37■■■■□ 3.09
NXT1-201ENST00000254998 COL17A1Q9UMD9 1497 aaPredicted RBP34.36■■■■□ 3.09
NXT1-201ENST00000254998 NEO1Q92859 1461 aa34.35■■■■□ 3.09
NXT1-201ENST00000254998 ARAP3Q8WWN8 1544 aa34.3■■■■□ 3.08
NXT1-201ENST00000254998 PLCH2O75038 1416 aa34.3■■■■□ 3.08
NXT1-201ENST00000254998 CFAP74Q9C0B2 1584 aa34.25■■■■□ 3.07
NXT1-201ENST00000254998 FANCAO15360 1455 aa34.24■■■■□ 3.07
NXT1-201ENST00000254998 MYO5CQ9NQX4 1742 aa34.24■■■■□ 3.07
NXT1-201ENST00000254998 MTUS2Q5JR59 1369 aa34.23■■■■□ 3.07
NXT1-201ENST00000254998 AKNAQ7Z591 1439 aa34.19■■■■□ 3.06
NXT1-201ENST00000254998 EHBP1L1Q8N3D4 1523 aa34.19■■■■□ 3.06
NXT1-201ENST00000254998 TIAM1Q13009 1591 aa34.19■■■■□ 3.06
NXT1-201ENST00000254998 MAP3K1Q13233 1512 aa34.18■■■■□ 3.06
NXT1-201ENST00000254998 EFCAB2Q5VUJ9 269 aa34.14■■■■□ 3.06
NXT1-201ENST00000254998 PREX2Q70Z35 1606 aa34.12■■■■□ 3.05
NXT1-201ENST00000254998 ARHGAP5Q13017 1502 aa34.09■■■■□ 3.05
NXT1-201ENST00000254998 CDC42BPBQ9Y5S2 1711 aa34.09■■■■□ 3.05
NXT1-201ENST00000254998 DENND4BO75064 1496 aaPredicted RBP34.07■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms