RNA–Protein interactions for RNA: ENST00000252440.11

ECSIT-201, Transcript of ECSIT signalling integrator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECSIT, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECSIT-201ENST00000252440 SYNJ2O15056 1496 aa23.76■■□□□ 1.39
ECSIT-201ENST00000252440 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
ECSIT-201ENST00000252440 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
ECSIT-201ENST00000252440 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
ECSIT-201ENST00000252440 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.37
ECSIT-201ENST00000252440 RANGAP1P46060 587 aaPredicted RBP23.64■■□□□ 1.37
ECSIT-201ENST00000252440 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
ECSIT-201ENST00000252440 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
ECSIT-201ENST00000252440 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
ECSIT-201ENST00000252440 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
ECSIT-201ENST00000252440 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
ECSIT-201ENST00000252440 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
ECSIT-201ENST00000252440 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
ECSIT-201ENST00000252440 EFCAB5A4FU69 1503 aa23.58■■□□□ 1.37
ECSIT-201ENST00000252440 NUP160Q12769 1436 aa23.5■■□□□ 1.35
ECSIT-201ENST00000252440 IQGAP2Q13576 1575 aa23.5■■□□□ 1.35
ECSIT-201ENST00000252440 SAMD9Q5K651 1589 aa23.49■■□□□ 1.35
ECSIT-201ENST00000252440 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
ECSIT-201ENST00000252440 KIAA0586Q9BVV6 1533 aa23.47■■□□□ 1.35
ECSIT-201ENST00000252440 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
ECSIT-201ENST00000252440 UGGT2Q9NYU1 1516 aa23.41■■□□□ 1.34
ECSIT-201ENST00000252440 APLP2Q06481 763 aa23.39■■□□□ 1.34
ECSIT-201ENST00000252440 FHOD3Q2V2M9 1422 aa23.39■■□□□ 1.34
ECSIT-201ENST00000252440 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
ECSIT-201ENST00000252440 FMN1Q68DA7 1419 aa23.35■■□□□ 1.33
ECSIT-201ENST00000252440 SHROOM2Q13796 1616 aa23.35■■□□□ 1.33
ECSIT-201ENST00000252440 CYB5RLQ6IPT4 315 aa23.35■■□□□ 1.33
ECSIT-201ENST00000252440 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
ECSIT-201ENST00000252440 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
ECSIT-201ENST00000252440 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
ECSIT-201ENST00000252440 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
ECSIT-201ENST00000252440 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
ECSIT-201ENST00000252440 CASKIN1Q8WXD9 1431 aa23.29■■□□□ 1.32
ECSIT-201ENST00000252440 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
ECSIT-201ENST00000252440 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
ECSIT-201ENST00000252440 KIAA0556O60303 1618 aa23.26■■□□□ 1.31
ECSIT-201ENST00000252440 JPH4Q96JJ6 628 aa23.23■■□□□ 1.31
ECSIT-201ENST00000252440 TIAM1Q13009 1591 aa23.23■■□□□ 1.31
ECSIT-201ENST00000252440 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.31
ECSIT-201ENST00000252440 CFAP43Q8NDM7 1665 aa23.2■■□□□ 1.3
ECSIT-201ENST00000252440 CARMIL2Q6F5E8 1435 aa23.17■■□□□ 1.3
ECSIT-201ENST00000252440 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
ECSIT-201ENST00000252440 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
ECSIT-201ENST00000252440 LRRC9Q6ZRR7 1453 aa23.12■■□□□ 1.29
ECSIT-201ENST00000252440 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
ECSIT-201ENST00000252440 ATP1B4Q9UN42 357 aaPredicted RBP23.09■■□□□ 1.29
ECSIT-201ENST00000252440 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
ECSIT-201ENST00000252440 LRRIQ1Q96JM4 1722 aa23.07■■□□□ 1.28
ECSIT-201ENST00000252440 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
ECSIT-201ENST00000252440 EPRSP07814 1512 aaKnown RBP23■■□□□ 1.27
ECSIT-201ENST00000252440 NUP153P49790 1475 aaKnown RBP22.96■■□□□ 1.27
ECSIT-201ENST00000252440 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
ECSIT-201ENST00000252440 EHBP1L1Q8N3D4 1523 aa22.95■■□□□ 1.26
ECSIT-201ENST00000252440 MTUS2Q5JR59 1369 aa22.95■■□□□ 1.26
ECSIT-201ENST00000252440 ABCA8O94911 1581 aa22.94■■□□□ 1.26
ECSIT-201ENST00000252440 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
ECSIT-201ENST00000252440 PTPRGP23470 1445 aa22.92■■□□□ 1.26
ECSIT-201ENST00000252440 CDK13Q14004 1512 aaKnown RBP22.91■■□□□ 1.26
ECSIT-201ENST00000252440 TRHP20396 242 aaPredicted RBP22.89■■□□□ 1.26
ECSIT-201ENST00000252440 SUPT6HQ7KZ85 1726 aaKnown RBP22.88■■□□□ 1.25
ECSIT-201ENST00000252440 ADCY10Q96PN6 1610 aa22.88■■□□□ 1.25
ECSIT-201ENST00000252440 MAGI3Q5TCQ9 1506 aa22.88■■□□□ 1.25
ECSIT-201ENST00000252440 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
ECSIT-201ENST00000252440 CCNB3Q8WWL7 1395 aa22.86■■□□□ 1.25
ECSIT-201ENST00000252440 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
ECSIT-201ENST00000252440 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
ECSIT-201ENST00000252440 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
ECSIT-201ENST00000252440 NPM1P06748 294 aaKnown RBP eCLIP22.79■■□□□ 1.24
ECSIT-201ENST00000252440 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
ECSIT-201ENST00000252440 ARID3CA6NKF2 412 aa22.77■■□□□ 1.24
ECSIT-201ENST00000252440 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
ECSIT-201ENST00000252440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
ECSIT-201ENST00000252440 ATP10BO94823 1461 aa22.77■■□□□ 1.23
ECSIT-201ENST00000252440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
ECSIT-201ENST00000252440 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
ECSIT-201ENST00000252440 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
ECSIT-201ENST00000252440 MYOM3Q5VTT5 1437 aa22.75■■□□□ 1.23
ECSIT-201ENST00000252440 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
ECSIT-201ENST00000252440 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
ECSIT-201ENST00000252440 KIF13AQ9H1H9 1805 aa22.69■■□□□ 1.22
ECSIT-201ENST00000252440 HRCP23327 699 aa22.69■■□□□ 1.22
ECSIT-201ENST00000252440 PLEKHD1A6NEE1 506 aa22.67■■□□□ 1.22
ECSIT-201ENST00000252440 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
ECSIT-201ENST00000252440 KDM5BQ9UGL1 1544 aa22.66■■□□□ 1.22
ECSIT-201ENST00000252440 MIA2Q96PC5 1412 aa22.66■■□□□ 1.22
ECSIT-201ENST00000252440 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
ECSIT-201ENST00000252440 DIP2BQ9P265 1576 aa22.63■■□□□ 1.21
ECSIT-201ENST00000252440 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
ECSIT-201ENST00000252440 TCOF1Q13428 1488 aaKnown RBP22.63■■□□□ 1.21
ECSIT-201ENST00000252440 KIF14Q15058 1648 aa22.61■■□□□ 1.21
ECSIT-201ENST00000252440 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
ECSIT-201ENST00000252440 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
ECSIT-201ENST00000252440 ITSN2Q9NZM3 1697 aa22.59■■□□□ 1.21
ECSIT-201ENST00000252440 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
ECSIT-201ENST00000252440 ITGAEP38570 1179 aa22.54■■□□□ 1.2
ECSIT-201ENST00000252440 GPATCH8Q9UKJ3 1502 aaKnown RBP22.54■■□□□ 1.2
ECSIT-201ENST00000252440 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
ECSIT-201ENST00000252440 GLI2P10070 1586 aa22.5■■□□□ 1.19
ECSIT-201ENST00000252440 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
ECSIT-201ENST00000252440 CDC42BPAQ5VT25 1732 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms