RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 WDR62O43379 1518 aa6.39□□□□□ -1.39
UBE4A-201ENST00000252108 KDM5BQ9UGL1 1544 aa6.39□□□□□ -1.39
UBE4A-201ENST00000252108 GRIN2BQ13224 1484 aa6.38□□□□□ -1.39
UBE4A-201ENST00000252108 FYCO1Q9BQS8 1478 aa6.38□□□□□ -1.39
UBE4A-201ENST00000252108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.37□□□□□ -1.39
UBE4A-201ENST00000252108 MAGI3Q5TCQ9 1506 aa6.37□□□□□ -1.39
UBE4A-201ENST00000252108 LRRC9Q6ZRR7 1453 aa6.36□□□□□ -1.39
UBE4A-201ENST00000252108 RAD54L2Q9Y4B4 1467 aa6.36□□□□□ -1.39
UBE4A-201ENST00000252108 GCC2Q8IWJ2 1684 aa6.34□□□□□ -1.39
UBE4A-201ENST00000252108 DENND4BO75064 1496 aaPredicted RBP6.34□□□□□ -1.39
UBE4A-201ENST00000252108 CASKIN1Q8WXD9 1431 aa6.34□□□□□ -1.39
UBE4A-201ENST00000252108 DHX57Q6P158 1386 aaKnown RBP6.34□□□□□ -1.4
UBE4A-201ENST00000252108 UGGT2Q9NYU1 1516 aa6.33□□□□□ -1.4
UBE4A-201ENST00000252108 CENPBP07199 599 aaPredicted RBP6.33□□□□□ -1.4
UBE4A-201ENST00000252108 ADCY10Q96PN6 1610 aa6.32□□□□□ -1.4
UBE4A-201ENST00000252108 TCOF1Q13428 1488 aaKnown RBP6.32□□□□□ -1.4
UBE4A-201ENST00000252108 CARMIL1Q5VZK9 1371 aa6.32□□□□□ -1.4
UBE4A-201ENST00000252108 KANK4Q5T7N3 995 aaPredicted RBP6.3□□□□□ -1.4
UBE4A-201ENST00000252108 CLSPNQ9HAW4 1339 aa6.3□□□□□ -1.4
UBE4A-201ENST00000252108 PHLDB1Q86UU1 1377 aa6.29□□□□□ -1.4
UBE4A-201ENST00000252108 EIF4G3O43432 1585 aaKnown RBP6.29□□□□□ -1.4
UBE4A-201ENST00000252108 DNAJC5BQ9UF47 199 aa6.29□□□□□ -1.4
UBE4A-201ENST00000252108 CROCC2H7BZ55 1655 aa6.29□□□□□ -1.4
UBE4A-201ENST00000252108 DISP1Q96F81 1524 aa6.28□□□□□ -1.4
UBE4A-201ENST00000252108 KIAA0556O60303 1618 aa6.28□□□□□ -1.4
UBE4A-201ENST00000252108 HECW1Q76N89 1606 aa6.28□□□□□ -1.4
UBE4A-201ENST00000252108 GAPVD1Q14C86 1478 aa6.27□□□□□ -1.41
UBE4A-201ENST00000252108 PTPN23Q9H3S7 1636 aa6.27□□□□□ -1.41
UBE4A-201ENST00000252108 MRC2Q9UBG0 1479 aa6.27□□□□□ -1.41
UBE4A-201ENST00000252108 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
UBE4A-201ENST00000252108 PTPRKQ15262 1439 aa6.27□□□□□ -1.41
UBE4A-201ENST00000252108 EHBP1L1Q8N3D4 1523 aa6.26□□□□□ -1.41
UBE4A-201ENST00000252108 AKNAQ7Z591 1439 aa6.26□□□□□ -1.41
UBE4A-201ENST00000252108 SUPT6HQ7KZ85 1726 aaKnown RBP6.26□□□□□ -1.41
UBE4A-201ENST00000252108 FHAD1B1AJZ9 1412 aa6.26□□□□□ -1.41
UBE4A-201ENST00000252108 SHROOM2Q13796 1616 aa6.26□□□□□ -1.41
UBE4A-201ENST00000252108 KDM6BO15054 1643 aa6.25□□□□□ -1.41
UBE4A-201ENST00000252108 CEP170Q5SW79 1584 aa6.25□□□□□ -1.41
UBE4A-201ENST00000252108 POLR1AO95602 1720 aaPredicted RBP6.25□□□□□ -1.41
UBE4A-201ENST00000252108 CCNB3Q8WWL7 1395 aa6.25□□□□□ -1.41
UBE4A-201ENST00000252108 PDS5BQ9NTI5 1447 aa6.25□□□□□ -1.41
UBE4A-201ENST00000252108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.23□□□□□ -1.41
UBE4A-201ENST00000252108 FHOD3Q2V2M9 1422 aa6.23□□□□□ -1.41
UBE4A-201ENST00000252108 IFT140Q96RY7 1462 aa6.23□□□□□ -1.41
UBE4A-201ENST00000252108 DNMT1P26358 1616 aaKnown RBP6.22□□□□□ -1.41
UBE4A-201ENST00000252108 HFM1A2PYH4 1435 aa6.22□□□□□ -1.41
UBE4A-201ENST00000252108 ZNF608Q9ULD9 1512 aaPredicted RBP6.22□□□□□ -1.41
UBE4A-201ENST00000252108 NUP160Q12769 1436 aa6.22□□□□□ -1.41
UBE4A-201ENST00000252108 CDC42BPAQ5VT25 1732 aa6.21□□□□□ -1.41
UBE4A-201ENST00000252108 FGD6Q6ZV73 1430 aa6.21□□□□□ -1.42
UBE4A-201ENST00000252108 ABCA8O94911 1581 aa6.21□□□□□ -1.42
UBE4A-201ENST00000252108 FMN1Q68DA7 1419 aa6.21□□□□□ -1.42
UBE4A-201ENST00000252108 CCDC18Q5T9S5 1454 aa6.21□□□□□ -1.42
UBE4A-201ENST00000252108 RAPGEF6Q8TEU7 1601 aa6.2□□□□□ -1.42
UBE4A-201ENST00000252108 EPRSP07814 1512 aaKnown RBP6.2□□□□□ -1.42
UBE4A-201ENST00000252108 UBTFP17480 764 aaKnown RBP6.2□□□□□ -1.42
UBE4A-201ENST00000252108 ADGBQ8N7X0 1667 aa6.2□□□□□ -1.42
UBE4A-201ENST00000252108 NUP153P49790 1475 aaKnown RBP6.2□□□□□ -1.42
UBE4A-201ENST00000252108 NCOA2Q15596 1464 aa6.19□□□□□ -1.42
UBE4A-201ENST00000252108 CCER1Q8TC90 406 aaPredicted RBP6.19□□□□□ -1.42
UBE4A-201ENST00000252108 KIAA0586Q9BVV6 1533 aa6.19□□□□□ -1.42
UBE4A-201ENST00000252108 GRIN2AQ12879 1464 aa6.19□□□□□ -1.42
UBE4A-201ENST00000252108 NAIPQ13075 1403 aa6.19□□□□□ -1.42
UBE4A-201ENST00000252108 MAGI1Q96QZ7 1491 aaPredicted RBP6.18□□□□□ -1.42
UBE4A-201ENST00000252108 MYOM3Q5VTT5 1437 aa6.18□□□□□ -1.42
UBE4A-201ENST00000252108 RAB3GAP2Q9H2M9 1393 aa6.18□□□□□ -1.42
UBE4A-201ENST00000252108 KDM5DQ9BY66 1539 aa6.17□□□□□ -1.42
UBE4A-201ENST00000252108 MBD5Q9P267 1494 aa6.17□□□□□ -1.42
UBE4A-201ENST00000252108 SCAF1Q9H7N4 1312 aaKnown RBP6.17□□□□□ -1.42
UBE4A-201ENST00000252108 ADGRL2O95490 1459 aa6.16□□□□□ -1.42
UBE4A-201ENST00000252108 SETD5Q9C0A6 1442 aa6.16□□□□□ -1.42
UBE4A-201ENST00000252108 MIA2Q96PC5 1412 aa6.16□□□□□ -1.42
UBE4A-201ENST00000252108 ABCC10Q5T3U5 1492 aa6.16□□□□□ -1.42
UBE4A-201ENST00000252108 EHMT2Q96KQ7 1210 aa6.16□□□□□ -1.42
UBE4A-201ENST00000252108 ITSN2Q9NZM3 1697 aa6.16□□□□□ -1.42
UBE4A-201ENST00000252108 KIF14Q15058 1648 aa6.15□□□□□ -1.42
UBE4A-201ENST00000252108 TDRD9Q8NDG6 1382 aaKnown RBP6.15□□□□□ -1.42
UBE4A-201ENST00000252108 CDK13Q14004 1512 aaKnown RBP6.15□□□□□ -1.43
UBE4A-201ENST00000252108 APLP2Q06481 763 aa6.14□□□□□ -1.43
UBE4A-201ENST00000252108 CDC42BPBQ9Y5S2 1711 aa6.14□□□□□ -1.43
UBE4A-201ENST00000252108 UACAQ9BZF9 1416 aa6.14□□□□□ -1.43
UBE4A-201ENST00000252108 SYNJ2O15056 1496 aa6.14□□□□□ -1.43
UBE4A-201ENST00000252108 TEX14Q8IWB6 1497 aa6.13□□□□□ -1.43
UBE4A-201ENST00000252108 MAST1Q9Y2H9 1570 aa6.13□□□□□ -1.43
UBE4A-201ENST00000252108 CHD1O14646 1710 aa6.12□□□□□ -1.43
UBE4A-201ENST00000252108 E9PCH4 1651 aa6.12□□□□□ -1.43
UBE4A-201ENST00000252108 CLASP1Q7Z460 1538 aa6.12□□□□□ -1.43
UBE4A-201ENST00000252108 ARHGEF5Q12774 1597 aa6.12□□□□□ -1.43
UBE4A-201ENST00000252108 PREX2Q70Z35 1606 aa6.12□□□□□ -1.43
UBE4A-201ENST00000252108 ZNF316A6NFI3 1004 aaPredicted RBP6.12□□□□□ -1.43
UBE4A-201ENST00000252108 ROCK1Q13464 1354 aa6.11□□□□□ -1.43
UBE4A-201ENST00000252108 SHANK2Q9UPX8 1470 aa6.11□□□□□ -1.43
UBE4A-201ENST00000252108 PTPRGP23470 1445 aa6.1□□□□□ -1.43
UBE4A-201ENST00000252108 MAGI2Q86UL8 1455 aa6.1□□□□□ -1.43
UBE4A-201ENST00000252108 ACIN1Q9UKV3 1341 aaKnown RBP6.1□□□□□ -1.43
UBE4A-201ENST00000252108 PZPP20742 1482 aa6.1□□□□□ -1.43
UBE4A-201ENST00000252108 UNC13BO14795 1591 aa6.1□□□□□ -1.43
UBE4A-201ENST00000252108 SPATA31E1Q6ZUB1 1445 aa6.09□□□□□ -1.43
UBE4A-201ENST00000252108 DIEXFQ68CQ4 756 aaKnown RBP6.08□□□□□ -1.44
UBE4A-201ENST00000252108 ABCC5O15440 1437 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms