RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
MYOD1-201ENST00000250003 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
MYOD1-201ENST00000250003 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
MYOD1-201ENST00000250003 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
MYOD1-201ENST00000250003 GOLGA3Q08378 1498 aa26.95■■□□□ 1.9
MYOD1-201ENST00000250003 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
MYOD1-201ENST00000250003 NUP160Q12769 1436 aa26.86■■□□□ 1.89
MYOD1-201ENST00000250003 CEP170Q5SW79 1584 aa26.81■■□□□ 1.88
MYOD1-201ENST00000250003 UBTFP17480 764 aaKnown RBP26.8■■□□□ 1.88
MYOD1-201ENST00000250003 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
MYOD1-201ENST00000250003 CTTNBP2Q8WZ74 1663 aa26.69■■□□□ 1.86
MYOD1-201ENST00000250003 JPH4Q96JJ6 628 aa26.67■■□□□ 1.86
MYOD1-201ENST00000250003 ERCC6L2Q5T890 1561 aa26.64■■□□□ 1.86
MYOD1-201ENST00000250003 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
MYOD1-201ENST00000250003 CEP162Q5TB80 1403 aa26.59■■□□□ 1.85
MYOD1-201ENST00000250003 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
MYOD1-201ENST00000250003 KIAA0586Q9BVV6 1533 aa26.56■■□□□ 1.84
MYOD1-201ENST00000250003 RANGAP1P46060 587 aaPredicted RBP26.54■■□□□ 1.84
MYOD1-201ENST00000250003 IQGAP2Q13576 1575 aa26.51■■□□□ 1.83
MYOD1-201ENST00000250003 TRHP20396 242 aaPredicted RBP26.49■■□□□ 1.83
MYOD1-201ENST00000250003 CLIP1P30622 1438 aa26.49■■□□□ 1.83
MYOD1-201ENST00000250003 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
MYOD1-201ENST00000250003 SAMD9Q5K651 1589 aa26.36■■□□□ 1.81
MYOD1-201ENST00000250003 EFCAB5A4FU69 1503 aa26.35■■□□□ 1.81
MYOD1-201ENST00000250003 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
MYOD1-201ENST00000250003 CARMIL2Q6F5E8 1435 aa26.29■■□□□ 1.8
MYOD1-201ENST00000250003 P3H3Q8IVL6 736 aa26.27■■□□□ 1.8
MYOD1-201ENST00000250003 KIAA0556O60303 1618 aa26.26■■□□□ 1.79
MYOD1-201ENST00000250003 DISP1Q96F81 1524 aa26.26■■□□□ 1.79
MYOD1-201ENST00000250003 PTPRGP23470 1445 aa26.26■■□□□ 1.79
MYOD1-201ENST00000250003 FHOD3Q2V2M9 1422 aa26.26■■□□□ 1.79
MYOD1-201ENST00000250003 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
MYOD1-201ENST00000250003 NPM1P06748 294 aaKnown RBP eCLIP26.23■■□□□ 1.79
MYOD1-201ENST00000250003 VPS8Q8N3P4 1428 aa26.19■■□□□ 1.78
MYOD1-201ENST00000250003 ADCY10Q96PN6 1610 aa26.15■■□□□ 1.78
MYOD1-201ENST00000250003 FMN1Q68DA7 1419 aa26.08■■□□□ 1.77
MYOD1-201ENST00000250003 PCF11O94913 1555 aaKnown RBP26.08■■□□□ 1.77
MYOD1-201ENST00000250003 UACAQ9BZF9 1416 aa26.05■■□□□ 1.76
MYOD1-201ENST00000250003 MAPKBP1O60336 1514 aa26.03■■□□□ 1.76
MYOD1-201ENST00000250003 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
MYOD1-201ENST00000250003 UHRF1BP1LA0JNW5 1464 aa26.01■■□□□ 1.75
MYOD1-201ENST00000250003 ABCC2Q92887 1545 aa26■■□□□ 1.75
MYOD1-201ENST00000250003 ABCC10Q5T3U5 1492 aa25.99■■□□□ 1.75
MYOD1-201ENST00000250003 FYCO1Q9BQS8 1478 aa25.99■■□□□ 1.75
MYOD1-201ENST00000250003 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
MYOD1-201ENST00000250003 RAPGEF6Q8TEU7 1601 aa25.94■■□□□ 1.74
MYOD1-201ENST00000250003 PLB1Q6P1J6 1458 aa25.93■■□□□ 1.74
MYOD1-201ENST00000250003 KIF13AQ9H1H9 1805 aa25.93■■□□□ 1.74
MYOD1-201ENST00000250003 HECW1Q76N89 1606 aa25.92■■□□□ 1.74
MYOD1-201ENST00000250003 LRRIQ1Q96JM4 1722 aa25.92■■□□□ 1.74
MYOD1-201ENST00000250003 ATP1B4Q9UN42 357 aaPredicted RBP25.92■■□□□ 1.74
MYOD1-201ENST00000250003 ABCA8O94911 1581 aa25.9■■□□□ 1.74
MYOD1-201ENST00000250003 KDM5BQ9UGL1 1544 aa25.89■■□□□ 1.74
MYOD1-201ENST00000250003 ASXL2Q76L83 1435 aa25.89■■□□□ 1.73
MYOD1-201ENST00000250003 DIP2BQ9P265 1576 aa25.88■■□□□ 1.73
MYOD1-201ENST00000250003 CFAP43Q8NDM7 1665 aa25.86■■□□□ 1.73
MYOD1-201ENST00000250003 NUP153P49790 1475 aaKnown RBP25.85■■□□□ 1.73
MYOD1-201ENST00000250003 APLP2Q06481 763 aa25.84■■□□□ 1.73
MYOD1-201ENST00000250003 TIAM1Q13009 1591 aa25.84■■□□□ 1.73
MYOD1-201ENST00000250003 PPARGC1BQ86YN6 1023 aaKnown RBP25.81■■□□□ 1.72
MYOD1-201ENST00000250003 EPRSP07814 1512 aaKnown RBP25.8■■□□□ 1.72
MYOD1-201ENST00000250003 CDK13Q14004 1512 aaKnown RBP25.8■■□□□ 1.72
MYOD1-201ENST00000250003 ARID3CA6NKF2 412 aa25.79■■□□□ 1.72
MYOD1-201ENST00000250003 CCDC18Q5T9S5 1454 aa25.79■■□□□ 1.72
MYOD1-201ENST00000250003 MAP3K1Q13233 1512 aa25.79■■□□□ 1.72
MYOD1-201ENST00000250003 ZCCHC11Q5TAX3 1644 aaKnown RBP25.79■■□□□ 1.72
MYOD1-201ENST00000250003 KANK4Q5T7N3 995 aaPredicted RBP25.72■■□□□ 1.71
MYOD1-201ENST00000250003 GLI2P10070 1586 aa25.71■■□□□ 1.71
MYOD1-201ENST00000250003 LRRC9Q6ZRR7 1453 aa25.7■■□□□ 1.7
MYOD1-201ENST00000250003 WDR7Q9Y4E6 1490 aa25.69■■□□□ 1.7
MYOD1-201ENST00000250003 KCNH8Q96L42 1107 aa25.67■■□□□ 1.7
MYOD1-201ENST00000250003 ATP10BO94823 1461 aa25.67■■□□□ 1.7
MYOD1-201ENST00000250003 MAGI3Q5TCQ9 1506 aa25.67■■□□□ 1.7
MYOD1-201ENST00000250003 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
MYOD1-201ENST00000250003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
MYOD1-201ENST00000250003 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
MYOD1-201ENST00000250003 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
MYOD1-201ENST00000250003 EHBP1L1Q8N3D4 1523 aa25.62■■□□□ 1.69
MYOD1-201ENST00000250003 MAP3K4Q9Y6R4 1608 aa25.56■■□□□ 1.68
MYOD1-201ENST00000250003 PPRC1Q5VV67 1664 aaKnown RBP25.54■■□□□ 1.68
MYOD1-201ENST00000250003 CDK11AQ9UQ88 783 aaPredicted RBP25.54■■□□□ 1.68
MYOD1-201ENST00000250003 SUPT6HQ7KZ85 1726 aaKnown RBP25.54■■□□□ 1.68
MYOD1-201ENST00000250003 KDM6BO15054 1643 aa25.53■■□□□ 1.68
MYOD1-201ENST00000250003 TROQ12816 1431 aaPredicted RBP25.52■■□□□ 1.68
MYOD1-201ENST00000250003 CD109Q6YHK3 1445 aa25.52■■□□□ 1.68
MYOD1-201ENST00000250003 TEX14Q8IWB6 1497 aa25.5■■□□□ 1.67
MYOD1-201ENST00000250003 KIF14Q15058 1648 aa25.49■■□□□ 1.67
MYOD1-201ENST00000250003 PLEKHD1A6NEE1 506 aa25.49■■□□□ 1.67
MYOD1-201ENST00000250003 NCOA2Q15596 1464 aa25.48■■□□□ 1.67
MYOD1-201ENST00000250003 COL17A1Q9UMD9 1497 aaPredicted RBP25.44■■□□□ 1.66
MYOD1-201ENST00000250003 PHLDB1Q86UU1 1377 aa25.44■■□□□ 1.66
MYOD1-201ENST00000250003 ABCA9Q8IUA7 1624 aa25.36■■□□□ 1.65
MYOD1-201ENST00000250003 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
MYOD1-201ENST00000250003 TTC37Q6PGP7 1564 aa25.34■■□□□ 1.65
MYOD1-201ENST00000250003 MYOM3Q5VTT5 1437 aa25.33■■□□□ 1.65
MYOD1-201ENST00000250003 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.64
MYOD1-201ENST00000250003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.64
MYOD1-201ENST00000250003 CCNB3Q8WWL7 1395 aa25.31■■□□□ 1.64
MYOD1-201ENST00000250003 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
MYOD1-201ENST00000250003 CDC42BPAQ5VT25 1732 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms