RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
VPREB3-201ENST00000248948 IQGAP2Q13576 1575 aa21.69■■□□□ 1.06
VPREB3-201ENST00000248948 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
VPREB3-201ENST00000248948 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
VPREB3-201ENST00000248948 PRG4Q92954 1404 aaPredicted RBP21.65■■□□□ 1.06
VPREB3-201ENST00000248948 EEA1Q15075 1411 aa21.63■■□□□ 1.05
VPREB3-201ENST00000248948 PRXQ9BXM0 1461 aa21.62■■□□□ 1.05
VPREB3-201ENST00000248948 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
VPREB3-201ENST00000248948 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
VPREB3-201ENST00000248948 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
VPREB3-201ENST00000248948 KIAA0556O60303 1618 aa21.49■■□□□ 1.03
VPREB3-201ENST00000248948 KIF21BO75037 1637 aa21.48■■□□□ 1.03
VPREB3-201ENST00000248948 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
VPREB3-201ENST00000248948 ADCY10Q96PN6 1610 aa21.46■■□□□ 1.03
VPREB3-201ENST00000248948 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
VPREB3-201ENST00000248948 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
VPREB3-201ENST00000248948 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
VPREB3-201ENST00000248948 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
VPREB3-201ENST00000248948 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
VPREB3-201ENST00000248948 PTPRGP23470 1445 aa21.36■■□□□ 1.01
VPREB3-201ENST00000248948 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
VPREB3-201ENST00000248948 KIF13AQ9H1H9 1805 aa21.33■■□□□ 1.01
VPREB3-201ENST00000248948 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
VPREB3-201ENST00000248948 ABCC2Q92887 1545 aa21.32■■□□□ 1
VPREB3-201ENST00000248948 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
VPREB3-201ENST00000248948 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
VPREB3-201ENST00000248948 DIP2BQ9P265 1576 aa21.25■□□□□ 0.99
VPREB3-201ENST00000248948 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
VPREB3-201ENST00000248948 ABCA8O94911 1581 aa21.23■□□□□ 0.99
VPREB3-201ENST00000248948 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
VPREB3-201ENST00000248948 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
VPREB3-201ENST00000248948 KDM5BQ9UGL1 1544 aa21.2■□□□□ 0.98
VPREB3-201ENST00000248948 ABCC10Q5T3U5 1492 aa21.2■□□□□ 0.98
VPREB3-201ENST00000248948 NPM1P06748 294 aaKnown RBP eCLIP21.19■□□□□ 0.98
VPREB3-201ENST00000248948 PLB1Q6P1J6 1458 aa21.16■□□□□ 0.98
VPREB3-201ENST00000248948 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
VPREB3-201ENST00000248948 RAPGEF6Q8TEU7 1601 aa21.12■□□□□ 0.97
VPREB3-201ENST00000248948 GLI2P10070 1586 aa21.1■□□□□ 0.97
VPREB3-201ENST00000248948 ASXL2Q76L83 1435 aa21.1■□□□□ 0.97
VPREB3-201ENST00000248948 FHOD3Q2V2M9 1422 aa21.05■□□□□ 0.96
VPREB3-201ENST00000248948 WDR7Q9Y4E6 1490 aa21.04■□□□□ 0.96
VPREB3-201ENST00000248948 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
VPREB3-201ENST00000248948 TSPOAP1O95153 1857 aa21.02■□□□□ 0.96
VPREB3-201ENST00000248948 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
VPREB3-201ENST00000248948 PPRC1Q5VV67 1664 aaKnown RBP21■□□□□ 0.95
VPREB3-201ENST00000248948 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
VPREB3-201ENST00000248948 FAM69CQ0P6D2 419 aa20.99■□□□□ 0.95
VPREB3-201ENST00000248948 ARHGAP35Q9NRY4 1499 aa20.99■□□□□ 0.95
VPREB3-201ENST00000248948 CFAP43Q8NDM7 1665 aa20.99■□□□□ 0.95
VPREB3-201ENST00000248948 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
VPREB3-201ENST00000248948 NUP153P49790 1475 aaKnown RBP20.98■□□□□ 0.95
VPREB3-201ENST00000248948 HECW1Q76N89 1606 aa20.96■□□□□ 0.95
VPREB3-201ENST00000248948 ATP10BO94823 1461 aa20.94■□□□□ 0.94
VPREB3-201ENST00000248948 FMN1Q68DA7 1419 aa20.94■□□□□ 0.94
VPREB3-201ENST00000248948 RANGAP1P46060 587 aaPredicted RBP20.92■□□□□ 0.94
VPREB3-201ENST00000248948 KDM6BO15054 1643 aa20.91■□□□□ 0.94
VPREB3-201ENST00000248948 EHMT2Q96KQ7 1210 aa20.9■□□□□ 0.94
VPREB3-201ENST00000248948 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
VPREB3-201ENST00000248948 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
VPREB3-201ENST00000248948 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
VPREB3-201ENST00000248948 PCF11O94913 1555 aaKnown RBP20.84■□□□□ 0.93
VPREB3-201ENST00000248948 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.93
VPREB3-201ENST00000248948 CDK13Q14004 1512 aaKnown RBP20.81■□□□□ 0.92
VPREB3-201ENST00000248948 CLIP1P30622 1438 aa20.8■□□□□ 0.92
VPREB3-201ENST00000248948 FYCO1Q9BQS8 1478 aa20.77■□□□□ 0.92
VPREB3-201ENST00000248948 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
VPREB3-201ENST00000248948 CD109Q6YHK3 1445 aa20.77■□□□□ 0.91
VPREB3-201ENST00000248948 CASKIN1Q8WXD9 1431 aa20.75■□□□□ 0.91
VPREB3-201ENST00000248948 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
VPREB3-201ENST00000248948 CFAP74Q9C0B2 1584 aa20.73■□□□□ 0.91
VPREB3-201ENST00000248948 TTC37Q6PGP7 1564 aa20.72■□□□□ 0.91
VPREB3-201ENST00000248948 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
VPREB3-201ENST00000248948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
VPREB3-201ENST00000248948 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
VPREB3-201ENST00000248948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
VPREB3-201ENST00000248948 KIF14Q15058 1648 aa20.71■□□□□ 0.91
VPREB3-201ENST00000248948 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
VPREB3-201ENST00000248948 MYO5CQ9NQX4 1742 aa20.68■□□□□ 0.9
VPREB3-201ENST00000248948 PLEKHD1A6NEE1 506 aa20.67■□□□□ 0.9
VPREB3-201ENST00000248948 NEO1Q92859 1461 aa20.67■□□□□ 0.9
VPREB3-201ENST00000248948 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.9
VPREB3-201ENST00000248948 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
VPREB3-201ENST00000248948 TROQ12816 1431 aaPredicted RBP20.63■□□□□ 0.89
VPREB3-201ENST00000248948 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
VPREB3-201ENST00000248948 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
VPREB3-201ENST00000248948 ATP1B4Q9UN42 357 aaPredicted RBP20.58■□□□□ 0.89
VPREB3-201ENST00000248948 FANCAO15360 1455 aa20.57■□□□□ 0.88
VPREB3-201ENST00000248948 PREX2Q70Z35 1606 aa20.57■□□□□ 0.88
VPREB3-201ENST00000248948 FRMPD1Q5SYB0 1578 aa20.57■□□□□ 0.88
VPREB3-201ENST00000248948 RICTORQ6R327 1708 aa20.57■□□□□ 0.88
VPREB3-201ENST00000248948 CDC42BPAQ5VT25 1732 aa20.53■□□□□ 0.88
VPREB3-201ENST00000248948 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
VPREB3-201ENST00000248948 PLCH2O75038 1416 aa20.53■□□□□ 0.88
VPREB3-201ENST00000248948 EHBP1L1Q8N3D4 1523 aa20.51■□□□□ 0.87
VPREB3-201ENST00000248948 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
VPREB3-201ENST00000248948 ZMYM4Q5VZL5 1548 aa20.49■□□□□ 0.87
VPREB3-201ENST00000248948 AKNAQ7Z591 1439 aa20.48■□□□□ 0.87
VPREB3-201ENST00000248948 ARHGAP5Q13017 1502 aa20.48■□□□□ 0.87
VPREB3-201ENST00000248948 ARHGEF40Q8TER5 1519 aa20.47■□□□□ 0.87
VPREB3-201ENST00000248948 TIAM1Q13009 1591 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms