RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CUX2O14529 1486 aa18.93■□□□□ 0.62
NCLN-201ENST00000246117 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
NCLN-201ENST00000246117 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
NCLN-201ENST00000246117 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
NCLN-201ENST00000246117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.613e-6■□□□□ 11.3
NCLN-201ENST00000246117 RAB3GAP2Q9H2M9 1393 aa18.87■□□□□ 0.61
NCLN-201ENST00000246117 SMARCA4P51532 1647 aa18.86■□□□□ 0.61
NCLN-201ENST00000246117 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
NCLN-201ENST00000246117 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
NCLN-201ENST00000246117 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
NCLN-201ENST00000246117 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.6
NCLN-201ENST00000246117 ATAD2BQ9ULI0 1458 aa18.79■□□□□ 0.6
NCLN-201ENST00000246117 DAXXQ9UER7 740 aaPredicted RBP18.79■□□□□ 0.6
NCLN-201ENST00000246117 CLSPNQ9HAW4 1339 aa18.79■□□□□ 0.6
NCLN-201ENST00000246117 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
NCLN-201ENST00000246117 TDRD9Q8NDG6 1382 aaKnown RBP18.77■□□□□ 0.6
NCLN-201ENST00000246117 RGL3Q3MIN7 710 aa18.77■□□□□ 0.6
NCLN-201ENST00000246117 NBR1Q14596 966 aa18.74■□□□□ 0.59
NCLN-201ENST00000246117 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
NCLN-201ENST00000246117 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
NCLN-201ENST00000246117 FHOD3Q2V2M9 1422 aa18.71■□□□□ 0.59
NCLN-201ENST00000246117 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
NCLN-201ENST00000246117 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
NCLN-201ENST00000246117 B4GALNT3Q6L9W6 998 aa18.68■□□□□ 0.58
NCLN-201ENST00000246117 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
NCLN-201ENST00000246117 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
NCLN-201ENST00000246117 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
NCLN-201ENST00000246117 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
NCLN-201ENST00000246117 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
NCLN-201ENST00000246117 CHGAP10645 457 aaKnown RBP18.62■□□□□ 0.57
NCLN-201ENST00000246117 TSPY4P0CV99 314 aa18.61■□□□□ 0.57
NCLN-201ENST00000246117 TSPY10P0CW01 314 aa18.61■□□□□ 0.57
NCLN-201ENST00000246117 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
NCLN-201ENST00000246117 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
NCLN-201ENST00000246117 KIF21BO75037 1637 aa18.56■□□□□ 0.56
NCLN-201ENST00000246117 FHAD1B1AJZ9 1412 aa18.56■□□□□ 0.56
NCLN-201ENST00000246117 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
NCLN-201ENST00000246117 ANP32AP39687 249 aaKnown RBP18.54■□□□□ 0.56
NCLN-201ENST00000246117 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
NCLN-201ENST00000246117 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
NCLN-201ENST00000246117 L3MBTL2Q969R5 705 aa18.52■□□□□ 0.56
NCLN-201ENST00000246117 CARD11Q9BXL7 1154 aa18.52■□□□□ 0.56
NCLN-201ENST00000246117 IGF1RP08069 1367 aa18.51■□□□□ 0.55
NCLN-201ENST00000246117 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
NCLN-201ENST00000246117 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
NCLN-201ENST00000246117 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
NCLN-201ENST00000246117 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
NCLN-201ENST00000246117 MPHOSPH9Q99550 1183 aa18.48■□□□□ 0.55
NCLN-201ENST00000246117 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
NCLN-201ENST00000246117 DCAF11Q8TEB1 546 aa18.45■□□□□ 0.54
NCLN-201ENST00000246117 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
NCLN-201ENST00000246117 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
NCLN-201ENST00000246117 PKD2Q13563 968 aa18.43■□□□□ 0.54
NCLN-201ENST00000246117 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
NCLN-201ENST00000246117 ZNF644Q9H582 1327 aaPredicted RBP18.38■□□□□ 0.53
NCLN-201ENST00000246117 ZBTB47Q9UFB7 747 aaPredicted RBP18.37■□□□□ 0.53
NCLN-201ENST00000246117 ARXQ96QS3 562 aa18.35■□□□□ 0.53
NCLN-201ENST00000246117 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
NCLN-201ENST00000246117 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
NCLN-201ENST00000246117 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
NCLN-201ENST00000246117 DNAJC5BQ9UF47 199 aa18.34■□□□□ 0.53
NCLN-201ENST00000246117 NEUROD2Q15784 382 aa18.33■□□□□ 0.53
NCLN-201ENST00000246117 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
NCLN-201ENST00000246117 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
NCLN-201ENST00000246117 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.526e-7■■■■□ 23.5
NCLN-201ENST00000246117 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
NCLN-201ENST00000246117 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
NCLN-201ENST00000246117 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
NCLN-201ENST00000246117 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.527e-10■■■□□ 18.3
NCLN-201ENST00000246117 CCDC184Q52MB2 194 aa18.27■□□□□ 0.52
NCLN-201ENST00000246117 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
NCLN-201ENST00000246117 SLC24A1O60721 1099 aa18.24■□□□□ 0.51
NCLN-201ENST00000246117 CCDC18Q5T9S5 1454 aa18.23■□□□□ 0.51
NCLN-201ENST00000246117 CUX1P39880 1505 aa18.23■□□□□ 0.51
NCLN-201ENST00000246117 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
NCLN-201ENST00000246117 RGS3P49796 1198 aa18.22■□□□□ 0.51
NCLN-201ENST00000246117 NUP155O75694 1391 aa18.22■□□□□ 0.51
NCLN-201ENST00000246117 NESP48681 1621 aa18.22■□□□□ 0.51
NCLN-201ENST00000246117 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
NCLN-201ENST00000246117 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
NCLN-201ENST00000246117 WASHC2AQ641Q2 1341 aa18.2■□□□□ 0.5
NCLN-201ENST00000246117 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
NCLN-201ENST00000246117 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
NCLN-201ENST00000246117 KNSTRNQ9Y448 316 aa18.17■□□□□ 0.5
NCLN-201ENST00000246117 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
NCLN-201ENST00000246117 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
NCLN-201ENST00000246117 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
NCLN-201ENST00000246117 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
NCLN-201ENST00000246117 ERCC6Q03468 1493 aa18.15■□□□□ 0.5
NCLN-201ENST00000246117 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
NCLN-201ENST00000246117 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.49
NCLN-201ENST00000246117 PLIN1O60240 522 aa18.13■□□□□ 0.49
NCLN-201ENST00000246117 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
NCLN-201ENST00000246117 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
NCLN-201ENST00000246117 AQRO60306 1485 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■■□ 22.5
NCLN-201ENST00000246117 NBPF8Q3BBV2 869 aa18.11■□□□□ 0.49
NCLN-201ENST00000246117 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
NCLN-201ENST00000246117 CFTRP13569 1480 aa18.11■□□□□ 0.49
NCLN-201ENST00000246117 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
NCLN-201ENST00000246117 JPH4Q96JJ6 628 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms