RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
PCDHB12-201ENST00000239450 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
PCDHB12-201ENST00000239450 NEUROD1Q13562 356 aa17.2■□□□□ 0.34
PCDHB12-201ENST00000239450 ARHGAP35Q9NRY4 1499 aa17.19■□□□□ 0.34
PCDHB12-201ENST00000239450 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
PCDHB12-201ENST00000239450 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
PCDHB12-201ENST00000239450 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
PCDHB12-201ENST00000239450 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
PCDHB12-201ENST00000239450 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
PCDHB12-201ENST00000239450 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
PCDHB12-201ENST00000239450 CCNB3Q8WWL7 1395 aa17.06■□□□□ 0.32
PCDHB12-201ENST00000239450 RRP7BPQ9NSQ0 103 aa17.06■□□□□ 0.32
PCDHB12-201ENST00000239450 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
PCDHB12-201ENST00000239450 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
PCDHB12-201ENST00000239450 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
PCDHB12-201ENST00000239450 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
PCDHB12-201ENST00000239450 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
PCDHB12-201ENST00000239450 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
PCDHB12-201ENST00000239450 YTHDC1Q96MU7 727 aaKnown RBP17.03■□□□□ 0.32
PCDHB12-201ENST00000239450 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
PCDHB12-201ENST00000239450 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
PCDHB12-201ENST00000239450 IFT140Q96RY7 1462 aa17.01■□□□□ 0.31
PCDHB12-201ENST00000239450 FMN1Q68DA7 1419 aa17■□□□□ 0.31
PCDHB12-201ENST00000239450 PHLDB1Q86UU1 1377 aa16.95■□□□□ 0.3
PCDHB12-201ENST00000239450 PLEKHD1A6NEE1 506 aa16.93■□□□□ 0.3
PCDHB12-201ENST00000239450 SIN3AQ96ST3 1273 aa16.91■□□□□ 0.3
PCDHB12-201ENST00000239450 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
PCDHB12-201ENST00000239450 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
PCDHB12-201ENST00000239450 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
PCDHB12-201ENST00000239450 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
PCDHB12-201ENST00000239450 CUL7Q14999 1698 aa16.87■□□□□ 0.29
PCDHB12-201ENST00000239450 HIRIP3Q9BW71 556 aaPredicted RBP16.86■□□□□ 0.29
PCDHB12-201ENST00000239450 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
PCDHB12-201ENST00000239450 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
PCDHB12-201ENST00000239450 RAB3GAP2Q9H2M9 1393 aa16.84■□□□□ 0.29
PCDHB12-201ENST00000239450 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
PCDHB12-201ENST00000239450 CASKIN1Q8WXD9 1431 aa16.84■□□□□ 0.29
PCDHB12-201ENST00000239450 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
PCDHB12-201ENST00000239450 ZNF644Q9H582 1327 aaPredicted RBP16.83■□□□□ 0.28
PCDHB12-201ENST00000239450 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
PCDHB12-201ENST00000239450 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
PCDHB12-201ENST00000239450 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
PCDHB12-201ENST00000239450 TIAM1Q13009 1591 aa16.8■□□□□ 0.28
PCDHB12-201ENST00000239450 POLR3GLQ9BT43 218 aa16.79■□□□□ 0.28
PCDHB12-201ENST00000239450 FOXD1Q16676 465 aa16.79■□□□□ 0.28
PCDHB12-201ENST00000239450 WDR62O43379 1518 aa16.79■□□□□ 0.28
PCDHB12-201ENST00000239450 CENPBP07199 599 aaPredicted RBP16.79■□□□□ 0.28
PCDHB12-201ENST00000239450 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
PCDHB12-201ENST00000239450 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
PCDHB12-201ENST00000239450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
PCDHB12-201ENST00000239450 EFCAB5A4FU69 1503 aa16.77■□□□□ 0.28
PCDHB12-201ENST00000239450 FYCO1Q9BQS8 1478 aa16.77■□□□□ 0.27
PCDHB12-201ENST00000239450 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
PCDHB12-201ENST00000239450 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
PCDHB12-201ENST00000239450 PTPRGP23470 1445 aa16.75■□□□□ 0.27
PCDHB12-201ENST00000239450 KIAA0586Q9BVV6 1533 aa16.74■□□□□ 0.27
PCDHB12-201ENST00000239450 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
PCDHB12-201ENST00000239450 PRG4Q92954 1404 aaPredicted RBP16.74■□□□□ 0.27
PCDHB12-201ENST00000239450 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
PCDHB12-201ENST00000239450 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
PCDHB12-201ENST00000239450 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
PCDHB12-201ENST00000239450 NCOA2Q15596 1464 aa16.72■□□□□ 0.27
PCDHB12-201ENST00000239450 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
PCDHB12-201ENST00000239450 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
PCDHB12-201ENST00000239450 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDHB12-201ENST00000239450 PBRM1Q86U86 1689 aa16.71■□□□□ 0.26
PCDHB12-201ENST00000239450 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
PCDHB12-201ENST00000239450 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
PCDHB12-201ENST00000239450 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
PCDHB12-201ENST00000239450 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDHB12-201ENST00000239450 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
PCDHB12-201ENST00000239450 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
PCDHB12-201ENST00000239450 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
PCDHB12-201ENST00000239450 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
PCDHB12-201ENST00000239450 EPRSP07814 1512 aaKnown RBP16.65■□□□□ 0.26
PCDHB12-201ENST00000239450 MYOM3Q5VTT5 1437 aa16.65■□□□□ 0.26
PCDHB12-201ENST00000239450 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
PCDHB12-201ENST00000239450 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
PCDHB12-201ENST00000239450 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
PCDHB12-201ENST00000239450 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
PCDHB12-201ENST00000239450 MIER1Q8N108 512 aa16.59■□□□□ 0.25
PCDHB12-201ENST00000239450 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
PCDHB12-201ENST00000239450 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
PCDHB12-201ENST00000239450 DISP1Q96F81 1524 aa16.55■□□□□ 0.24
PCDHB12-201ENST00000239450 CYB5RLQ6IPT4 315 aa16.55■□□□□ 0.24
PCDHB12-201ENST00000239450 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
PCDHB12-201ENST00000239450 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
PCDHB12-201ENST00000239450 CEP170Q5SW79 1584 aa16.54■□□□□ 0.24
PCDHB12-201ENST00000239450 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
PCDHB12-201ENST00000239450 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
PCDHB12-201ENST00000239450 EHBP1L1Q8N3D4 1523 aa16.52■□□□□ 0.24
PCDHB12-201ENST00000239450 NUP153P49790 1475 aaKnown RBP16.51■□□□□ 0.23
PCDHB12-201ENST00000239450 PTPRKQ15262 1439 aa16.5■□□□□ 0.23
PCDHB12-201ENST00000239450 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
PCDHB12-201ENST00000239450 KIAA0556O60303 1618 aa16.5■□□□□ 0.23
PCDHB12-201ENST00000239450 SAMD9Q5K651 1589 aa16.5■□□□□ 0.23
PCDHB12-201ENST00000239450 UGGT2Q9NYU1 1516 aa16.49■□□□□ 0.23
PCDHB12-201ENST00000239450 PKD2Q13563 968 aa16.49■□□□□ 0.23
PCDHB12-201ENST00000239450 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
PCDHB12-201ENST00000239450 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms