RNA–Protein interactions for RNA: ENST00000238856.8

AFTPH-202, Transcript of aftiphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFTPH, Length 4,040 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-202ENST00000238856 FAM9BQ8IZU0 186 aa23■■□□□ 1.27
AFTPH-202ENST00000238856 FBLN2P98095 1184 aa22.99■■□□□ 1.27
AFTPH-202ENST00000238856 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
AFTPH-202ENST00000238856 SENP3-EIF4A1A0A087X0R7 540 aa22.95■■□□□ 1.26
AFTPH-202ENST00000238856 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
AFTPH-202ENST00000238856 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
AFTPH-202ENST00000238856 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
AFTPH-202ENST00000238856 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
AFTPH-202ENST00000238856 FHOD3Q2V2M9 1422 aa22.81■■□□□ 1.24
AFTPH-202ENST00000238856 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
AFTPH-202ENST00000238856 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
AFTPH-202ENST00000238856 TSHZ2Q9NRE2 1034 aa22.79■■□□□ 1.24
AFTPH-202ENST00000238856 PPP1R15AO75807 674 aaPredicted RBP22.78■■□□□ 1.24
AFTPH-202ENST00000238856 EIF4G2P78344 907 aaKnown RBP eCLIP22.77■■□□□ 1.24
AFTPH-202ENST00000238856 IGF1RP08069 1367 aa22.77■■□□□ 1.24
AFTPH-202ENST00000238856 FOXD1Q16676 465 aa22.77■■□□□ 1.24
AFTPH-202ENST00000238856 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
AFTPH-202ENST00000238856 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
AFTPH-202ENST00000238856 SALL2Q9Y467 1007 aaPredicted RBP22.73■■□□□ 1.23
AFTPH-202ENST00000238856 PRXQ9BXM0 1461 aa22.71■■□□□ 1.23
AFTPH-202ENST00000238856 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
AFTPH-202ENST00000238856 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
AFTPH-202ENST00000238856 PHLDB1Q86UU1 1377 aa22.7■■□□□ 1.22
AFTPH-202ENST00000238856 ARHGAP35Q9NRY4 1499 aa22.7■■□□□ 1.22
AFTPH-202ENST00000238856 MYT1LQ9UL68 1186 aa22.67■■□□□ 1.22
AFTPH-202ENST00000238856 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
AFTPH-202ENST00000238856 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
AFTPH-202ENST00000238856 KDM2AQ9Y2K7 1162 aa22.66■■□□□ 1.22
AFTPH-202ENST00000238856 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
AFTPH-202ENST00000238856 HSPA5P11021 654 aaKnown RBP22.63■■□□□ 1.21
AFTPH-202ENST00000238856 TIMELESSQ9UNS1 1208 aa22.62■■□□□ 1.21
AFTPH-202ENST00000238856 CUX1P39880 1505 aa22.61■■□□□ 1.21
AFTPH-202ENST00000238856 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
AFTPH-202ENST00000238856 CCER2I3L3R5 266 aa22.59■■□□□ 1.21
AFTPH-202ENST00000238856 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
AFTPH-202ENST00000238856 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.21
AFTPH-202ENST00000238856 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
AFTPH-202ENST00000238856 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
AFTPH-202ENST00000238856 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
AFTPH-202ENST00000238856 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
AFTPH-202ENST00000238856 B4GALNT3Q6L9W6 998 aa22.52■■□□□ 1.2
AFTPH-202ENST00000238856 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
AFTPH-202ENST00000238856 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
AFTPH-202ENST00000238856 CFTRP13569 1480 aa22.48■■□□□ 1.19
AFTPH-202ENST00000238856 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
AFTPH-202ENST00000238856 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
AFTPH-202ENST00000238856 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
AFTPH-202ENST00000238856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.19
AFTPH-202ENST00000238856 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
AFTPH-202ENST00000238856 FANCD2Q9BXW9 1451 aa22.46■■□□□ 1.19
AFTPH-202ENST00000238856 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
AFTPH-202ENST00000238856 RTL5Q5HYW3 569 aaPredicted RBP22.44■■□□□ 1.18
AFTPH-202ENST00000238856 NBR1Q14596 966 aa22.44■■□□□ 1.18
AFTPH-202ENST00000238856 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
AFTPH-202ENST00000238856 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
AFTPH-202ENST00000238856 RGL3Q3MIN7 710 aa22.4■■□□□ 1.18
AFTPH-202ENST00000238856 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
AFTPH-202ENST00000238856 CCDC18Q5T9S5 1454 aa22.39■■□□□ 1.17
AFTPH-202ENST00000238856 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
AFTPH-202ENST00000238856 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
AFTPH-202ENST00000238856 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
AFTPH-202ENST00000238856 ANP32AP39687 249 aaKnown RBP22.35■■□□□ 1.17
AFTPH-202ENST00000238856 PPP4R2Q9NY27 417 aa22.35■■□□□ 1.17
AFTPH-202ENST00000238856 FGD6Q6ZV73 1430 aa22.34■■□□□ 1.17
AFTPH-202ENST00000238856 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
AFTPH-202ENST00000238856 TIAM1Q13009 1591 aa22.31■■□□□ 1.16
AFTPH-202ENST00000238856 NESP48681 1621 aa22.28■■□□□ 1.16
AFTPH-202ENST00000238856 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.15
AFTPH-202ENST00000238856 PKD2Q13563 968 aa22.26■■□□□ 1.15
AFTPH-202ENST00000238856 ZNF644Q9H582 1327 aaPredicted RBP22.25■■□□□ 1.15
AFTPH-202ENST00000238856 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
AFTPH-202ENST00000238856 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
AFTPH-202ENST00000238856 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
AFTPH-202ENST00000238856 CCDC184Q52MB2 194 aa22.22■■□□□ 1.15
AFTPH-202ENST00000238856 PRKRIP1Q9H875 184 aaPredicted RBP22.22■■□□□ 1.15
AFTPH-202ENST00000238856 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
AFTPH-202ENST00000238856 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
AFTPH-202ENST00000238856 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
AFTPH-202ENST00000238856 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
AFTPH-202ENST00000238856 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
AFTPH-202ENST00000238856 ZBTB47Q9UFB7 747 aaPredicted RBP22.17■■□□□ 1.14
AFTPH-202ENST00000238856 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
AFTPH-202ENST00000238856 MAPKBP1O60336 1514 aa22.15■■□□□ 1.14
AFTPH-202ENST00000238856 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.14
AFTPH-202ENST00000238856 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
AFTPH-202ENST00000238856 PCF11O94913 1555 aaKnown RBP22.13■■□□□ 1.13
AFTPH-202ENST00000238856 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
AFTPH-202ENST00000238856 CC2D1BQ5T0F9 858 aaKnown RBP22.12■■□□□ 1.13
AFTPH-202ENST00000238856 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
AFTPH-202ENST00000238856 NBPF8Q3BBV2 869 aa22.07■■□□□ 1.12
AFTPH-202ENST00000238856 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
AFTPH-202ENST00000238856 BCL11AQ9H165 835 aa22.06■■□□□ 1.12
AFTPH-202ENST00000238856 NUP155O75694 1391 aa22.06■■□□□ 1.12
AFTPH-202ENST00000238856 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.124e-9■■■■□ 23.1
AFTPH-202ENST00000238856 KIF7Q2M1P5 1343 aa22.04■■□□□ 1.12
AFTPH-202ENST00000238856 C11orf95C9JLR9 678 aaPredicted RBP22.04■■□□□ 1.12
AFTPH-202ENST00000238856 HFM1A2PYH4 1435 aa22.04■■□□□ 1.12
AFTPH-202ENST00000238856 CHGAP10645 457 aaKnown RBP22.04■■□□□ 1.12
AFTPH-202ENST00000238856 NAIPQ13075 1403 aa22.04■■□□□ 1.12
AFTPH-202ENST00000238856 CANXP27824 592 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms