RNA–Protein interactions for RNA: ENST00000235878.5

GBP3-201, Transcript of guanylate binding protein 3, humanhuman

TSL 2

Gene GBP3, Length 2,062 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-201ENST00000235878 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
GBP3-201ENST00000235878 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
GBP3-201ENST00000235878 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
GBP3-201ENST00000235878 CC2D2AQ9P2K1 1620 aa11.38□□□□□ -0.59
GBP3-201ENST00000235878 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
GBP3-201ENST00000235878 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
GBP3-201ENST00000235878 MAP3K1Q13233 1512 aa11.36□□□□□ -0.59
GBP3-201ENST00000235878 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
GBP3-201ENST00000235878 NEUROD1Q13562 356 aa11.35□□□□□ -0.59
GBP3-201ENST00000235878 DNAJC5Q9H3Z4 198 aa11.34□□□□□ -0.59
GBP3-201ENST00000235878 FANCD2Q9BXW9 1451 aa11.33□□□□□ -0.59
GBP3-201ENST00000235878 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
GBP3-201ENST00000235878 ABCA10Q8WWZ4 1543 aa11.29□□□□□ -0.6
GBP3-201ENST00000235878 DNMBPQ6XZF7 1577 aa11.29□□□□□ -0.6
GBP3-201ENST00000235878 CENPBP07199 599 aaPredicted RBP11.29□□□□□ -0.6
GBP3-201ENST00000235878 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
GBP3-201ENST00000235878 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
GBP3-201ENST00000235878 ZBTB22O15209 634 aa11.27□□□□□ -0.61
GBP3-201ENST00000235878 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
GBP3-201ENST00000235878 MIER1Q8N108 512 aa11.26□□□□□ -0.61
GBP3-201ENST00000235878 LRRC9Q6ZRR7 1453 aa11.25□□□□□ -0.61
GBP3-201ENST00000235878 RAD54L2Q9Y4B4 1467 aa11.25□□□□□ -0.61
GBP3-201ENST00000235878 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
GBP3-201ENST00000235878 NESP48681 1621 aa11.23□□□□□ -0.61
GBP3-201ENST00000235878 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.62
GBP3-201ENST00000235878 PHLDB1Q86UU1 1377 aa11.21□□□□□ -0.62
GBP3-201ENST00000235878 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.62
GBP3-201ENST00000235878 LAMC3Q9Y6N6 1575 aa11.2□□□□□ -0.62
GBP3-201ENST00000235878 EFCAB5A4FU69 1503 aa11.2□□□□□ -0.62
GBP3-201ENST00000235878 CUL7Q14999 1698 aa11.2□□□□□ -0.62
GBP3-201ENST00000235878 MYT1Q01538 1121 aa11.19□□□□□ -0.62
GBP3-201ENST00000235878 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
GBP3-201ENST00000235878 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
GBP3-201ENST00000235878 URB2Q14146 1524 aaKnown RBP11.18□□□□□ -0.62
GBP3-201ENST00000235878 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
GBP3-201ENST00000235878 SETD5Q9C0A6 1442 aa11.18□□□□□ -0.62
GBP3-201ENST00000235878 PCF11O94913 1555 aaKnown RBP11.17□□□□□ -0.62
GBP3-201ENST00000235878 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
GBP3-201ENST00000235878 FYCO1Q9BQS8 1478 aa11.17□□□□□ -0.62
GBP3-201ENST00000235878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.17□□□□□ -0.62
GBP3-201ENST00000235878 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
GBP3-201ENST00000235878 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
GBP3-201ENST00000235878 P3H3Q8IVL6 736 aa11.16□□□□□ -0.62
GBP3-201ENST00000235878 MAPKBP1O60336 1514 aa11.16□□□□□ -0.62
GBP3-201ENST00000235878 ITGAEP38570 1179 aa11.15□□□□□ -0.63
GBP3-201ENST00000235878 ABCA5Q8WWZ7 1642 aa11.14□□□□□ -0.63
GBP3-201ENST00000235878 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
GBP3-201ENST00000235878 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
GBP3-201ENST00000235878 FMN1Q68DA7 1419 aa11.12□□□□□ -0.63
GBP3-201ENST00000235878 PDS5BQ9NTI5 1447 aa11.12□□□□□ -0.63
GBP3-201ENST00000235878 SNAPC4Q5SXM2 1469 aa11.11□□□□□ -0.63
GBP3-201ENST00000235878 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
GBP3-201ENST00000235878 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
GBP3-201ENST00000235878 SAMD9Q5K651 1589 aa11.1□□□□□ -0.63
GBP3-201ENST00000235878 YTHDC1Q96MU7 727 aaKnown RBP11.1□□□□□ -0.63
GBP3-201ENST00000235878 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
GBP3-201ENST00000235878 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
GBP3-201ENST00000235878 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.63
GBP3-201ENST00000235878 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
GBP3-201ENST00000235878 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
GBP3-201ENST00000235878 FGD6Q6ZV73 1430 aa11.06□□□□□ -0.64
GBP3-201ENST00000235878 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
GBP3-201ENST00000235878 SIN3AQ96ST3 1273 aa11.04□□□□□ -0.64
GBP3-201ENST00000235878 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
GBP3-201ENST00000235878 KIF21AQ7Z4S6 1674 aa11.02□□□□□ -0.64
GBP3-201ENST00000235878 PTPRKQ15262 1439 aa11.02□□□□□ -0.64
GBP3-201ENST00000235878 LRRIQ1Q96JM4 1722 aa11.02□□□□□ -0.64
GBP3-201ENST00000235878 MTUS2Q5JR59 1369 aa11.01□□□□□ -0.65
GBP3-201ENST00000235878 PPP1R15AO75807 674 aaPredicted RBP11.01□□□□□ -0.65
GBP3-201ENST00000235878 NCOA2Q15596 1464 aa11.01□□□□□ -0.65
GBP3-201ENST00000235878 ARHGEF11O15085 1522 aa11□□□□□ -0.65
GBP3-201ENST00000235878 HFM1A2PYH4 1435 aa11□□□□□ -0.65
GBP3-201ENST00000235878 MYOM3Q5VTT5 1437 aa11□□□□□ -0.65
GBP3-201ENST00000235878 EHBP1L1Q8N3D4 1523 aa10.98□□□□□ -0.65
GBP3-201ENST00000235878 UGGT2Q9NYU1 1516 aa10.97□□□□□ -0.65
GBP3-201ENST00000235878 NAIPQ13075 1403 aa10.97□□□□□ -0.65
GBP3-201ENST00000235878 UACAQ9BZF9 1416 aa10.97□□□□□ -0.65
GBP3-201ENST00000235878 MAGI3Q5TCQ9 1506 aa10.96□□□□□ -0.65
GBP3-201ENST00000235878 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.66
GBP3-201ENST00000235878 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.66
GBP3-201ENST00000235878 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.66
GBP3-201ENST00000235878 TCOF1Q13428 1488 aaKnown RBP10.95□□□□□ -0.66
GBP3-201ENST00000235878 MRC2Q9UBG0 1479 aa10.95□□□□□ -0.66
GBP3-201ENST00000235878 PBRM1Q86U86 1689 aa10.94□□□□□ -0.66
GBP3-201ENST00000235878 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
GBP3-201ENST00000235878 IQGAP2Q13576 1575 aa10.93□□□□□ -0.66
GBP3-201ENST00000235878 EPRSP07814 1512 aaKnown RBP10.92□□□□□ -0.66
GBP3-201ENST00000235878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
GBP3-201ENST00000235878 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
GBP3-201ENST00000235878 AKNAQ7Z591 1439 aa10.9□□□□□ -0.66
GBP3-201ENST00000235878 MIA2Q96PC5 1412 aa10.9□□□□□ -0.66
GBP3-201ENST00000235878 DDX10Q13206 875 aaKnown RBP10.9□□□□□ -0.66
GBP3-201ENST00000235878 MYCNP04198 464 aaPredicted RBP10.89□□□□□ -0.67
GBP3-201ENST00000235878 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
GBP3-201ENST00000235878 IFT140Q96RY7 1462 aa10.89□□□□□ -0.67
GBP3-201ENST00000235878 WDR62O43379 1518 aa10.89□□□□□ -0.67
GBP3-201ENST00000235878 KDM5BQ9UGL1 1544 aa10.89□□□□□ -0.67
GBP3-201ENST00000235878 TONSLQ96HA7 1378 aa10.88□□□□□ -0.67
GBP3-201ENST00000235878 KIAA0586Q9BVV6 1533 aa10.88□□□□□ -0.67
GBP3-201ENST00000235878 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms