RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
PCDH12-201ENST00000231484 SALL2Q9Y467 1007 aaPredicted RBP15.47■□□□□ 0.07
PCDH12-201ENST00000231484 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
PCDH12-201ENST00000231484 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
PCDH12-201ENST00000231484 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
PCDH12-201ENST00000231484 MSNP26038 577 aaKnown RBP15.36■□□□□ 0.05
PCDH12-201ENST00000231484 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
PCDH12-201ENST00000231484 PNNQ9H307 717 aaKnown RBP15.35■□□□□ 0.05
PCDH12-201ENST00000231484 ARID4BQ4LE39 1312 aaPredicted RBP15.34■□□□□ 0.05
PCDH12-201ENST00000231484 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
PCDH12-201ENST00000231484 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
PCDH12-201ENST00000231484 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDH12-201ENST00000231484 HSP90AA2PQ14568 343 aaPredicted RBP15.3■□□□□ 0.04
PCDH12-201ENST00000231484 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
PCDH12-201ENST00000231484 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
PCDH12-201ENST00000231484 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
PCDH12-201ENST00000231484 ABCC9O60706 1549 aa15.28■□□□□ 0.04
PCDH12-201ENST00000231484 PRKCSHP14314 528 aaPredicted RBP15.26■□□□□ 0.03
PCDH12-201ENST00000231484 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
PCDH12-201ENST00000231484 HIRIP3Q9BW71 556 aaPredicted RBP15.25■□□□□ 0.03
PCDH12-201ENST00000231484 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
PCDH12-201ENST00000231484 TNNT3P45378 269 aaPredicted RBP15.21■□□□□ 0.03
PCDH12-201ENST00000231484 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
PCDH12-201ENST00000231484 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDH12-201ENST00000231484 IPO9Q96P70 1041 aaKnown RBP15.18■□□□□ 0.02
PCDH12-201ENST00000231484 ARID3AQ99856 593 aa15.18■□□□□ 0.02
PCDH12-201ENST00000231484 PLCB2Q00722 1185 aa15.17■□□□□ 0.02
PCDH12-201ENST00000231484 HSP90AB1P08238 724 aaKnown RBP15.16■□□□□ 0.02
PCDH12-201ENST00000231484 GOLGA6L6A8MZA4 724 aa15.16■□□□□ 0.02
PCDH12-201ENST00000231484 RGS3P49796 1198 aa15.16■□□□□ 0.02
PCDH12-201ENST00000231484 ZRSR1Q15695 479 aaKnown RBP15.15■□□□□ 0.02
PCDH12-201ENST00000231484 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
PCDH12-201ENST00000231484 USP35Q9P2H5 1018 aa15.14■□□□□ 0.01
PCDH12-201ENST00000231484 GOLGA6L3A6NEY3 463 aa15.12■□□□□ 0.01
PCDH12-201ENST00000231484 HSCBQ8IWL3 235 aa15.12■□□□□ 0.01
PCDH12-201ENST00000231484 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
PCDH12-201ENST00000231484 PTMSP20962 102 aa15.11■□□□□ 0.01
PCDH12-201ENST00000231484 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
PCDH12-201ENST00000231484 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
PCDH12-201ENST00000231484 NRDCO43847 1150 aa15.08■□□□□ 0.01
PCDH12-201ENST00000231484 TPRNQ4KMQ1 711 aa15.08■□□□□ 0.01
PCDH12-201ENST00000231484 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
PCDH12-201ENST00000231484 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
PCDH12-201ENST00000231484 CHIC2Q9UKJ5 165 aa15.06■□□□□ 0
PCDH12-201ENST00000231484 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
PCDH12-201ENST00000231484 TIMELESSQ9UNS1 1208 aa15.05■□□□□ -0
PCDH12-201ENST00000231484 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
PCDH12-201ENST00000231484 FANCIQ9NVI1 1328 aa15.04■□□□□ -0
PCDH12-201ENST00000231484 GZF1Q9H116 711 aaPredicted RBP15.04■□□□□ -0
PCDH12-201ENST00000231484 SENP3-EIF4A1A0A087X0R7 540 aa15.04■□□□□ -0
PCDH12-201ENST00000231484 PODXL2Q9NZ53 605 aa15.04■□□□□ -0
PCDH12-201ENST00000231484 GSE1Q14687 1217 aa15.03■□□□□ -0
PCDH12-201ENST00000231484 GBP4Q96PP9 640 aa15.03■□□□□ -0
PCDH12-201ENST00000231484 SPRYD3Q8NCJ5 442 aa15.01□□□□□ -0.01
PCDH12-201ENST00000231484 ANO8Q9HCE9 1232 aaPredicted RBP15.01□□□□□ -0.01
PCDH12-201ENST00000231484 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
PCDH12-201ENST00000231484 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
PCDH12-201ENST00000231484 ESF1Q9H501 851 aaKnown RBP15□□□□□ -0.01
PCDH12-201ENST00000231484 ZBTB7CA1YPR0 619 aa15□□□□□ -0.01
PCDH12-201ENST00000231484 FTSJ3Q8IY81 847 aaKnown RBP15□□□□□ -0.01
PCDH12-201ENST00000231484 A0A0U1RQG5 324 aaPredicted RBP14.99□□□□□ -0.01
PCDH12-201ENST00000231484 DRC7Q8IY82 874 aa14.99□□□□□ -0.01
PCDH12-201ENST00000231484 SLKQ9H2G2 1235 aaPredicted RBP14.95□□□□□ -0.02
PCDH12-201ENST00000231484 A0A0G2JS52 829 aa14.92□□□□□ -0.02
PCDH12-201ENST00000231484 CLIP1P30622 1438 aa14.9□□□□□ -0.02
PCDH12-201ENST00000231484 CEP162Q5TB80 1403 aa14.9□□□□□ -0.02
PCDH12-201ENST00000231484 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
PCDH12-201ENST00000231484 ZNF771Q7L3S4 317 aaPredicted RBP14.89□□□□□ -0.03
PCDH12-201ENST00000231484 MS4A1P11836 297 aa14.88□□□□□ -0.03
PCDH12-201ENST00000231484 FRAT1Q92837 279 aaPredicted RBP14.88□□□□□ -0.03
PCDH12-201ENST00000231484 SYAP1Q96A49 352 aaPredicted RBP14.87□□□□□ -0.03
PCDH12-201ENST00000231484 CHMP4BQ9H444 224 aaKnown RBP14.87□□□□□ -0.03
PCDH12-201ENST00000231484 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
PCDH12-201ENST00000231484 CFAP44Q96MT7 982 aa14.84□□□□□ -0.03
PCDH12-201ENST00000231484 SETQ01105 290 aaPredicted RBP14.84□□□□□ -0.03
PCDH12-201ENST00000231484 GOLGA6L1Q8N7Z2 621 aa14.83□□□□□ -0.03
PCDH12-201ENST00000231484 DDX11L8A8MPP1 907 aa14.83□□□□□ -0.03
PCDH12-201ENST00000231484 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
PCDH12-201ENST00000231484 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
PCDH12-201ENST00000231484 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
PCDH12-201ENST00000231484 CALD1Q05682 793 aaKnown RBP14.81□□□□□ -0.04
PCDH12-201ENST00000231484 MCCP23508 829 aa14.8□□□□□ -0.04
PCDH12-201ENST00000231484 SIN3AQ96ST3 1273 aa14.8□□□□□ -0.04
PCDH12-201ENST00000231484 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
PCDH12-201ENST00000231484 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.79□□□□□ -0.04
PCDH12-201ENST00000231484 C14orf37Q86TY3 774 aa14.79□□□□□ -0.04
PCDH12-201ENST00000231484 MAP7D2Q96T17 732 aa14.78□□□□□ -0.04
PCDH12-201ENST00000231484 EEA1Q15075 1411 aa14.78□□□□□ -0.04
PCDH12-201ENST00000231484 GOLGA3Q08378 1498 aa14.78□□□□□ -0.04
PCDH12-201ENST00000231484 RRP7BPQ9NSQ0 103 aa14.77□□□□□ -0.04
PCDH12-201ENST00000231484 NUDCQ9Y266 331 aa14.76□□□□□ -0.05
PCDH12-201ENST00000231484 CALRP27797 417 aaKnown RBP14.76□□□□□ -0.05
PCDH12-201ENST00000231484 TULP1O00294 542 aaPredicted RBP14.76□□□□□ -0.05
PCDH12-201ENST00000231484 MTERF4Q7Z6M4 381 aaKnown RBP14.76□□□□□ -0.05
PCDH12-201ENST00000231484 MTUS2Q5JR59 1369 aa14.76□□□□□ -0.05
PCDH12-201ENST00000231484 CSPP1Q1MSJ5 1256 aa14.76□□□□□ -0.05
PCDH12-201ENST00000231484 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
PCDH12-201ENST00000231484 APPP05067 770 aa14.75□□□□□ -0.05
PCDH12-201ENST00000231484 PDE4AP27815 886 aa14.75□□□□□ -0.05
PCDH12-201ENST00000231484 CDCA8Q53HL2 280 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms