RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
USP5-201ENST00000229268 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
USP5-201ENST00000229268 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
USP5-201ENST00000229268 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
USP5-201ENST00000229268 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
USP5-201ENST00000229268 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
USP5-201ENST00000229268 ABCA5Q8WWZ7 1642 aa20.08■□□□□ 0.81
USP5-201ENST00000229268 CUL7Q14999 1698 aa20.05■□□□□ 0.8
USP5-201ENST00000229268 WDR97A6NE52 1622 aa20.04■□□□□ 0.8
USP5-201ENST00000229268 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
USP5-201ENST00000229268 GRIN2BQ13224 1484 aa20.03■□□□□ 0.8
USP5-201ENST00000229268 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
USP5-201ENST00000229268 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
USP5-201ENST00000229268 WDR62O43379 1518 aa19.99■□□□□ 0.79
USP5-201ENST00000229268 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
USP5-201ENST00000229268 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
USP5-201ENST00000229268 MTUS2Q5JR59 1369 aa19.93■□□□□ 0.78
USP5-201ENST00000229268 PHLDB1Q86UU1 1377 aa19.93■□□□□ 0.78
USP5-201ENST00000229268 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
USP5-201ENST00000229268 FMN1Q68DA7 1419 aa19.91■□□□□ 0.78
USP5-201ENST00000229268 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
USP5-201ENST00000229268 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
USP5-201ENST00000229268 TIAM1Q13009 1591 aa19.89■□□□□ 0.77
USP5-201ENST00000229268 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
USP5-201ENST00000229268 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
USP5-201ENST00000229268 ADAMTS12P58397 1594 aa19.87■□□□□ 0.77
USP5-201ENST00000229268 CASKIN1Q8WXD9 1431 aa19.86■□□□□ 0.77
USP5-201ENST00000229268 EFCAB5A4FU69 1503 aa19.85■□□□□ 0.77
USP5-201ENST00000229268 JPH4Q96JJ6 628 aa19.83■□□□□ 0.77
USP5-201ENST00000229268 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
USP5-201ENST00000229268 IQGAP2Q13576 1575 aa19.81■□□□□ 0.76
USP5-201ENST00000229268 FYCO1Q9BQS8 1478 aa19.8■□□□□ 0.76
USP5-201ENST00000229268 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
USP5-201ENST00000229268 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
USP5-201ENST00000229268 KIAA0586Q9BVV6 1533 aa19.74■□□□□ 0.75
USP5-201ENST00000229268 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
USP5-201ENST00000229268 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
USP5-201ENST00000229268 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
USP5-201ENST00000229268 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
USP5-201ENST00000229268 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
USP5-201ENST00000229268 RAB3GAP2Q9H2M9 1393 aa19.69■□□□□ 0.74
USP5-201ENST00000229268 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
USP5-201ENST00000229268 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
USP5-201ENST00000229268 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
USP5-201ENST00000229268 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
USP5-201ENST00000229268 DISP1Q96F81 1524 aa19.65■□□□□ 0.74
USP5-201ENST00000229268 NCOA2Q15596 1464 aa19.65■□□□□ 0.74
USP5-201ENST00000229268 CEP170Q5SW79 1584 aa19.65■□□□□ 0.74
USP5-201ENST00000229268 PLB1Q6P1J6 1458 aa19.64■□□□□ 0.73
USP5-201ENST00000229268 FGD6Q6ZV73 1430 aa19.63■□□□□ 0.73
USP5-201ENST00000229268 EPRSP07814 1512 aaKnown RBP19.62■□□□□ 0.73
USP5-201ENST00000229268 CFAP43Q8NDM7 1665 aa19.62■□□□□ 0.73
USP5-201ENST00000229268 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
USP5-201ENST00000229268 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
USP5-201ENST00000229268 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
USP5-201ENST00000229268 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
USP5-201ENST00000229268 UGGT2Q9NYU1 1516 aa19.6■□□□□ 0.73
USP5-201ENST00000229268 CARMIL2Q6F5E8 1435 aa19.6■□□□□ 0.73
USP5-201ENST00000229268 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
USP5-201ENST00000229268 LRRIQ1Q96JM4 1722 aa19.58■□□□□ 0.73
USP5-201ENST00000229268 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.72
USP5-201ENST00000229268 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
USP5-201ENST00000229268 KIAA0556O60303 1618 aa19.56■□□□□ 0.72
USP5-201ENST00000229268 TRIM52Q96A61 297 aa19.56■□□□□ 0.72
USP5-201ENST00000229268 MYOM3Q5VTT5 1437 aa19.55■□□□□ 0.72
USP5-201ENST00000229268 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
USP5-201ENST00000229268 NUP160Q12769 1436 aa19.54■□□□□ 0.72
USP5-201ENST00000229268 PTPRKQ15262 1439 aa19.54■□□□□ 0.72
USP5-201ENST00000229268 PLEKHD1A6NEE1 506 aa19.53■□□□□ 0.72
USP5-201ENST00000229268 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
USP5-201ENST00000229268 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
USP5-201ENST00000229268 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.72
USP5-201ENST00000229268 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.71
USP5-201ENST00000229268 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
USP5-201ENST00000229268 KCNH8Q96L42 1107 aa19.51■□□□□ 0.71
USP5-201ENST00000229268 PTPRGP23470 1445 aa19.5■□□□□ 0.71
USP5-201ENST00000229268 EHBP1L1Q8N3D4 1523 aa19.48■□□□□ 0.71
USP5-201ENST00000229268 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
USP5-201ENST00000229268 SCAF1Q9H7N4 1312 aaKnown RBP19.44■□□□□ 0.7
USP5-201ENST00000229268 FOXD1Q16676 465 aa19.44■□□□□ 0.7
USP5-201ENST00000229268 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
USP5-201ENST00000229268 HIRIP3Q9BW71 556 aaPredicted RBP19.41■□□□□ 0.7
USP5-201ENST00000229268 CHD1O14646 1710 aa19.39■□□□□ 0.69
USP5-201ENST00000229268 PTPN23Q9H3S7 1636 aa19.38■□□□□ 0.69
USP5-201ENST00000229268 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
USP5-201ENST00000229268 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
USP5-201ENST00000229268 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
USP5-201ENST00000229268 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.69
USP5-201ENST00000229268 ATP10BO94823 1461 aa19.35■□□□□ 0.69
USP5-201ENST00000229268 NAIPQ13075 1403 aa19.34■□□□□ 0.69
USP5-201ENST00000229268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.34■□□□□ 0.69
USP5-201ENST00000229268 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
USP5-201ENST00000229268 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
USP5-201ENST00000229268 HFM1A2PYH4 1435 aa19.3■□□□□ 0.68
USP5-201ENST00000229268 ARHGEF11O15085 1522 aa19.29■□□□□ 0.68
USP5-201ENST00000229268 KIF14Q15058 1648 aa19.28■□□□□ 0.68
USP5-201ENST00000229268 MIER1Q8N108 512 aa19.27■□□□□ 0.67
USP5-201ENST00000229268 MIA2Q96PC5 1412 aa19.27■□□□□ 0.67
USP5-201ENST00000229268 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
USP5-201ENST00000229268 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms