RNA–Protein interactions for RNA: ENST00000226382.3

PHOX2B-201, Transcript of paired like homeobox 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2B, Length 3,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2B-201ENST00000226382 KIF27Q86VH2 1401 aa29.13■■■□□ 2.25
PHOX2B-201ENST00000226382 PEG3Q9GZU2 1588 aa29.12■■■□□ 2.25
PHOX2B-201ENST00000226382 ANP32CO43423 234 aa29.12■■■□□ 2.25
PHOX2B-201ENST00000226382 WDR97A6NE52 1622 aa29.12■■■□□ 2.25
PHOX2B-201ENST00000226382 MAPKBP1O60336 1514 aa29.1■■■□□ 2.25
PHOX2B-201ENST00000226382 SETD5Q9C0A6 1442 aa29.06■■■□□ 2.24
PHOX2B-201ENST00000226382 PPP1R15AO75807 674 aaPredicted RBP29.06■■■□□ 2.24
PHOX2B-201ENST00000226382 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
PHOX2B-201ENST00000226382 PHLDB1Q86UU1 1377 aa29.04■■■□□ 2.24
PHOX2B-201ENST00000226382 CUX1P39880 1505 aa29.01■■■□□ 2.23
PHOX2B-201ENST00000226382 ANO8Q9HCE9 1232 aaPredicted RBP28.98■■■□□ 2.23
PHOX2B-201ENST00000226382 CUX2O14529 1486 aa28.96■■■□□ 2.23
PHOX2B-201ENST00000226382 HNRNPUQ00839 825 aaKnown RBP eCLIP28.95■■■□□ 2.22
PHOX2B-201ENST00000226382 MSH5O43196 834 aa28.87■■■□□ 2.21
PHOX2B-201ENST00000226382 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
PHOX2B-201ENST00000226382 CNGB1Q14028 1251 aaPredicted RBP28.86■■■□□ 2.21
PHOX2B-201ENST00000226382 TONSLQ96HA7 1378 aa28.84■■■□□ 2.21
PHOX2B-201ENST00000226382 IGF1RP08069 1367 aa28.84■■■□□ 2.21
PHOX2B-201ENST00000226382 CARMIL1Q5VZK9 1371 aa28.8■■■□□ 2.2
PHOX2B-201ENST00000226382 LRRC9Q6ZRR7 1453 aa28.8■■■□□ 2.2
PHOX2B-201ENST00000226382 CCER2I3L3R5 266 aa28.79■■■□□ 2.2
PHOX2B-201ENST00000226382 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
PHOX2B-201ENST00000226382 FHOD3Q2V2M9 1422 aa28.73■■■□□ 2.19
PHOX2B-201ENST00000226382 SENP3-EIF4A1A0A087X0R7 540 aa28.71■■■□□ 2.19
PHOX2B-201ENST00000226382 CDK11AQ9UQ88 783 aaPredicted RBP28.7■■■□□ 2.18
PHOX2B-201ENST00000226382 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
PHOX2B-201ENST00000226382 FAM9BQ8IZU0 186 aa28.65■■■□□ 2.18
PHOX2B-201ENST00000226382 CCDC184Q52MB2 194 aa28.64■■■□□ 2.18
PHOX2B-201ENST00000226382 RRP7BPQ9NSQ0 103 aa28.61■■■□□ 2.17
PHOX2B-201ENST00000226382 ARID3CA6NKF2 412 aa28.59■■■□□ 2.17
PHOX2B-201ENST00000226382 B4GALNT3Q6L9W6 998 aa28.59■■■□□ 2.17
PHOX2B-201ENST00000226382 TIMELESSQ9UNS1 1208 aa28.58■■■□□ 2.17
PHOX2B-201ENST00000226382 CFTRP13569 1480 aa28.55■■■□□ 2.16
PHOX2B-201ENST00000226382 HSPA5P11021 654 aaKnown RBP28.54■■■□□ 2.16
PHOX2B-201ENST00000226382 FHAD1B1AJZ9 1412 aa28.54■■■□□ 2.16
PHOX2B-201ENST00000226382 FOXD1Q16676 465 aa28.53■■■□□ 2.16
PHOX2B-201ENST00000226382 PCF11O94913 1555 aaKnown RBP28.53■■■□□ 2.16
PHOX2B-201ENST00000226382 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
PHOX2B-201ENST00000226382 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
PHOX2B-201ENST00000226382 WASHC2AQ641Q2 1341 aa28.49■■■□□ 2.15
PHOX2B-201ENST00000226382 NCAPD3P42695 1498 aa28.48■■■□□ 2.15
PHOX2B-201ENST00000226382 CCDC18Q5T9S5 1454 aa28.48■■■□□ 2.15
PHOX2B-201ENST00000226382 POLR3GLQ9BT43 218 aa28.48■■■□□ 2.15
PHOX2B-201ENST00000226382 PTPRKQ15262 1439 aa28.47■■■□□ 2.15
PHOX2B-201ENST00000226382 CCDC136Q96JN2 1154 aa28.46■■■□□ 2.15
PHOX2B-201ENST00000226382 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
PHOX2B-201ENST00000226382 SALL2Q9Y467 1007 aaPredicted RBP28.43■■■□□ 2.14
PHOX2B-201ENST00000226382 MRS2Q9HD23 443 aa28.43■■■□□ 2.14
PHOX2B-201ENST00000226382 AQRO60306 1485 aaKnown RBP eCLIP28.41■■■□□ 2.14
PHOX2B-201ENST00000226382 NBR1Q14596 966 aa28.4■■■□□ 2.14
PHOX2B-201ENST00000226382 FGD6Q6ZV73 1430 aa28.4■■■□□ 2.14
PHOX2B-201ENST00000226382 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.13
PHOX2B-201ENST00000226382 MAP3K1Q13233 1512 aa28.38■■■□□ 2.13
PHOX2B-201ENST00000226382 C11orf95C9JLR9 678 aaPredicted RBP28.38■■■□□ 2.13
PHOX2B-201ENST00000226382 UBE2Q2Q8WVN8 375 aa28.36■■■□□ 2.13
PHOX2B-201ENST00000226382 EIF4G2P78344 907 aaKnown RBP eCLIP28.35■■■□□ 2.13
PHOX2B-201ENST00000226382 FANCIQ9NVI1 1328 aa28.35■■■□□ 2.13
PHOX2B-201ENST00000226382 PPP4R2Q9NY27 417 aa28.35■■■□□ 2.13
PHOX2B-201ENST00000226382 EIF5BO60841 1220 aaKnown RBP28.34■■■□□ 2.13
PHOX2B-201ENST00000226382 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
PHOX2B-201ENST00000226382 UACAQ9BZF9 1416 aa28.31■■■□□ 2.12
PHOX2B-201ENST00000226382 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
PHOX2B-201ENST00000226382 L3MBTL2Q969R5 705 aa28.29■■■□□ 2.12
PHOX2B-201ENST00000226382 NAIPQ13075 1403 aa28.25■■■□□ 2.11
PHOX2B-201ENST00000226382 ZNF326Q5BKZ1 582 aaKnown RBP28.25■■■□□ 2.11
PHOX2B-201ENST00000226382 CASKIN1Q8WXD9 1431 aa28.24■■■□□ 2.11
PHOX2B-201ENST00000226382 PRKRIP1Q9H875 184 aaPredicted RBP28.24■■■□□ 2.11
PHOX2B-201ENST00000226382 HFM1A2PYH4 1435 aa28.23■■■□□ 2.11
PHOX2B-201ENST00000226382 CFAP43Q8NDM7 1665 aa28.21■■■□□ 2.11
PHOX2B-201ENST00000226382 DEKP35659 375 aaKnown RBP28.21■■■□□ 2.11
PHOX2B-201ENST00000226382 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
PHOX2B-201ENST00000226382 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
PHOX2B-201ENST00000226382 MPHOSPH9Q99550 1183 aa28.16■■■□□ 2.1
PHOX2B-201ENST00000226382 PTPN23Q9H3S7 1636 aa28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 FMN1Q68DA7 1419 aa28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 TDRD9Q8NDG6 1382 aaKnown RBP28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
PHOX2B-201ENST00000226382 NBPF8Q3BBV2 869 aa28.13■■■□□ 2.09
PHOX2B-201ENST00000226382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.1■■■□□ 2.09
PHOX2B-201ENST00000226382 MYOM3Q5VTT5 1437 aa28.09■■■□□ 2.09
PHOX2B-201ENST00000226382 CNTLNQ9NXG0 1405 aa28.09■■■□□ 2.09
PHOX2B-201ENST00000226382 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
PHOX2B-201ENST00000226382 AKNAQ7Z591 1439 aa28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 NOP58Q9Y2X3 529 aaKnown RBP28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 KDM5BQ9UGL1 1544 aa28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 CCDC7Q96M83 1385 aa28.07■■■□□ 2.08
PHOX2B-201ENST00000226382 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.05■■■□□ 2.08
PHOX2B-201ENST00000226382 ZBED9Q6R2W3 1325 aa28.04■■■□□ 2.08
PHOX2B-201ENST00000226382 KIF7Q2M1P5 1343 aa28.03■■■□□ 2.08
PHOX2B-201ENST00000226382 NPM2Q86SE8 214 aaKnown RBP28.02■■■□□ 2.08
PHOX2B-201ENST00000226382 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
PHOX2B-201ENST00000226382 SLC4A1APQ9BWU0 796 aaKnown RBP28■■■□□ 2.07
PHOX2B-201ENST00000226382 SNAPC4Q5SXM2 1469 aa27.99■■■□□ 2.07
PHOX2B-201ENST00000226382 NESP48681 1621 aa27.98■■■□□ 2.07
PHOX2B-201ENST00000226382 ERICH6BQ5W0A0 696 aa27.97■■■□□ 2.07
PHOX2B-201ENST00000226382 PLEKHG5O94827 1062 aa27.96■■■□□ 2.07
PHOX2B-201ENST00000226382 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
PHOX2B-201ENST00000226382 ZNF644Q9H582 1327 aaPredicted RBP27.94■■■□□ 2.06
PHOX2B-201ENST00000226382 EFCAB5A4FU69 1503 aa27.94■■■□□ 2.06
PHOX2B-201ENST00000226382 KDM6BO15054 1643 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms