RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ERICH3Q5RHP9 1530 aa17.71■□□□□ 0.43
TNFAIP1-201ENST00000226225 WDR62O43379 1518 aa17.7■□□□□ 0.42
TNFAIP1-201ENST00000226225 ITGAEP38570 1179 aa17.67■□□□□ 0.42
TNFAIP1-201ENST00000226225 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
TNFAIP1-201ENST00000226225 VPS8Q8N3P4 1428 aa17.66■□□□□ 0.42
TNFAIP1-201ENST00000226225 SNAPC4Q5SXM2 1469 aa17.65■□□□□ 0.42
TNFAIP1-201ENST00000226225 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
TNFAIP1-201ENST00000226225 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
TNFAIP1-201ENST00000226225 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
TNFAIP1-201ENST00000226225 KANK4Q5T7N3 995 aaPredicted RBP17.6■□□□□ 0.41
TNFAIP1-201ENST00000226225 ARAP1Q96P48 1450 aa17.6■□□□□ 0.41
TNFAIP1-201ENST00000226225 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
TNFAIP1-201ENST00000226225 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
TNFAIP1-201ENST00000226225 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.4
TNFAIP1-201ENST00000226225 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
TNFAIP1-201ENST00000226225 JPH4Q96JJ6 628 aa17.56■□□□□ 0.4
TNFAIP1-201ENST00000226225 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
TNFAIP1-201ENST00000226225 ACIN1Q9UKV3 1341 aaKnown RBP17.54■□□□□ 0.4
TNFAIP1-201ENST00000226225 CUL7Q14999 1698 aa17.53■□□□□ 0.4
TNFAIP1-201ENST00000226225 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
TNFAIP1-201ENST00000226225 EIF4G3O43432 1585 aaKnown RBP17.51■□□□□ 0.39
TNFAIP1-201ENST00000226225 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
TNFAIP1-201ENST00000226225 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
TNFAIP1-201ENST00000226225 WDR97A6NE52 1622 aa17.46■□□□□ 0.38
TNFAIP1-201ENST00000226225 SYNJ2O15056 1496 aa17.45■□□□□ 0.38
TNFAIP1-201ENST00000226225 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
TNFAIP1-201ENST00000226225 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
TNFAIP1-201ENST00000226225 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
TNFAIP1-201ENST00000226225 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
TNFAIP1-201ENST00000226225 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
TNFAIP1-201ENST00000226225 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
TNFAIP1-201ENST00000226225 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
TNFAIP1-201ENST00000226225 KIAA0586Q9BVV6 1533 aa17.39■□□□□ 0.37
TNFAIP1-201ENST00000226225 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
TNFAIP1-201ENST00000226225 IQGAP2Q13576 1575 aa17.36■□□□□ 0.37
TNFAIP1-201ENST00000226225 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
TNFAIP1-201ENST00000226225 ZNF777Q9ULD5 760 aaPredicted RBP17.32■□□□□ 0.36
TNFAIP1-201ENST00000226225 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
TNFAIP1-201ENST00000226225 EFCAB5A4FU69 1503 aa17.31■□□□□ 0.36
TNFAIP1-201ENST00000226225 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
TNFAIP1-201ENST00000226225 CASKIN1Q8WXD9 1431 aa17.28■□□□□ 0.36
TNFAIP1-201ENST00000226225 KCNH8Q96L42 1107 aa17.28■□□□□ 0.36
TNFAIP1-201ENST00000226225 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
TNFAIP1-201ENST00000226225 CTTNBP2Q8WZ74 1663 aa17.28■□□□□ 0.36
TNFAIP1-201ENST00000226225 PTPRGP23470 1445 aa17.27■□□□□ 0.36
TNFAIP1-201ENST00000226225 PCF11O94913 1555 aaKnown RBP17.24■□□□□ 0.35
TNFAIP1-201ENST00000226225 CHIC2Q9UKJ5 165 aa17.23■□□□□ 0.35
TNFAIP1-201ENST00000226225 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
TNFAIP1-201ENST00000226225 CCNB3Q8WWL7 1395 aa17.23■□□□□ 0.35
TNFAIP1-201ENST00000226225 NUP160Q12769 1436 aa17.23■□□□□ 0.35
TNFAIP1-201ENST00000226225 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
TNFAIP1-201ENST00000226225 LRRC9Q6ZRR7 1453 aa17.21■□□□□ 0.35
TNFAIP1-201ENST00000226225 PLB1Q6P1J6 1458 aa17.2■□□□□ 0.34
TNFAIP1-201ENST00000226225 PHLDB1Q86UU1 1377 aa17.19■□□□□ 0.34
TNFAIP1-201ENST00000226225 DISP1Q96F81 1524 aa17.18■□□□□ 0.34
TNFAIP1-201ENST00000226225 UGGT2Q9NYU1 1516 aa17.16■□□□□ 0.34
TNFAIP1-201ENST00000226225 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
TNFAIP1-201ENST00000226225 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
TNFAIP1-201ENST00000226225 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNFAIP1-201ENST00000226225 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
TNFAIP1-201ENST00000226225 SAMD9Q5K651 1589 aa17.12■□□□□ 0.33
TNFAIP1-201ENST00000226225 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
TNFAIP1-201ENST00000226225 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
TNFAIP1-201ENST00000226225 KIAA0556O60303 1618 aa17.11■□□□□ 0.33
TNFAIP1-201ENST00000226225 MYT1LQ9UL68 1186 aa17.1■□□□□ 0.33
TNFAIP1-201ENST00000226225 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
TNFAIP1-201ENST00000226225 CHD1O14646 1710 aa17.08■□□□□ 0.33
TNFAIP1-201ENST00000226225 MYT1Q01538 1121 aa17.08■□□□□ 0.32
TNFAIP1-201ENST00000226225 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
TNFAIP1-201ENST00000226225 CCDC18Q5T9S5 1454 aa17.07■□□□□ 0.32
TNFAIP1-201ENST00000226225 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
TNFAIP1-201ENST00000226225 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
TNFAIP1-201ENST00000226225 NUP153P49790 1475 aaKnown RBP17.04■□□□□ 0.32
TNFAIP1-201ENST00000226225 HECW1Q76N89 1606 aa17.04■□□□□ 0.32
TNFAIP1-201ENST00000226225 MIER1Q8N108 512 aa17.02■□□□□ 0.32
TNFAIP1-201ENST00000226225 UACAQ9BZF9 1416 aa17.02■□□□□ 0.31
TNFAIP1-201ENST00000226225 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
TNFAIP1-201ENST00000226225 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
TNFAIP1-201ENST00000226225 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
TNFAIP1-201ENST00000226225 RRBP1Q9P2E9 1410 aaKnown RBP17■□□□□ 0.31
TNFAIP1-201ENST00000226225 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
TNFAIP1-201ENST00000226225 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
TNFAIP1-201ENST00000226225 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
TNFAIP1-201ENST00000226225 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
TNFAIP1-201ENST00000226225 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
TNFAIP1-201ENST00000226225 ATP10BO94823 1461 aa16.96■□□□□ 0.31
TNFAIP1-201ENST00000226225 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
TNFAIP1-201ENST00000226225 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.3
TNFAIP1-201ENST00000226225 EHBP1L1Q8N3D4 1523 aa16.95■□□□□ 0.3
TNFAIP1-201ENST00000226225 RAB3GAP2Q9H2M9 1393 aa16.93■□□□□ 0.3
TNFAIP1-201ENST00000226225 MAGI3Q5TCQ9 1506 aa16.92■□□□□ 0.3
TNFAIP1-201ENST00000226225 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
TNFAIP1-201ENST00000226225 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
TNFAIP1-201ENST00000226225 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
TNFAIP1-201ENST00000226225 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
TNFAIP1-201ENST00000226225 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
TNFAIP1-201ENST00000226225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNFAIP1-201ENST00000226225 SIN3AQ96ST3 1273 aa16.83■□□□□ 0.28
TNFAIP1-201ENST00000226225 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
TNFAIP1-201ENST00000226225 ABCA8O94911 1581 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms