RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PRG4Q92954 1404 aaPredicted RBP31.16■■■□□ 2.58
PFN1-201ENST00000225655 JPH4Q96JJ6 628 aa31.15■■■□□ 2.58
PFN1-201ENST00000225655 KIAA0586Q9BVV6 1533 aa31.05■■■□□ 2.56
PFN1-201ENST00000225655 CARMIL1Q5VZK9 1371 aa31■■■□□ 2.55
PFN1-201ENST00000225655 ADCY10Q96PN6 1610 aa30.8■■■□□ 2.52
PFN1-201ENST00000225655 IQGAP2Q13576 1575 aa30.79■■■□□ 2.52
PFN1-201ENST00000225655 KIF13AQ9H1H9 1805 aa30.78■■■□□ 2.52
PFN1-201ENST00000225655 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.51
PFN1-201ENST00000225655 MAPKBP1O60336 1514 aa30.74■■■□□ 2.51
PFN1-201ENST00000225655 NPM1P06748 294 aaKnown RBP eCLIP30.74■■■□□ 2.51
PFN1-201ENST00000225655 CARMIL2Q6F5E8 1435 aa30.73■■■□□ 2.51
PFN1-201ENST00000225655 PTPRGP23470 1445 aa30.7■■■□□ 2.5
PFN1-201ENST00000225655 TNIKQ9UKE5 1360 aa30.67■■■□□ 2.5
PFN1-201ENST00000225655 ABCC10Q5T3U5 1492 aa30.67■■■□□ 2.5
PFN1-201ENST00000225655 DISP1Q96F81 1524 aa30.63■■■□□ 2.49
PFN1-201ENST00000225655 UGGT2Q9NYU1 1516 aa30.61■■■□□ 2.49
PFN1-201ENST00000225655 DIP2BQ9P265 1576 aa30.6■■■□□ 2.49
PFN1-201ENST00000225655 FAM69CQ0P6D2 419 aa30.58■■■□□ 2.49
PFN1-201ENST00000225655 TTBK1Q5TCY1 1321 aaPredicted RBP30.55■■■□□ 2.48
PFN1-201ENST00000225655 ABCC2Q92887 1545 aa30.53■■■□□ 2.48
PFN1-201ENST00000225655 CTTNBP2Q8WZ74 1663 aa30.53■■■□□ 2.48
PFN1-201ENST00000225655 UHRF1BP1LA0JNW5 1464 aa30.52■■■□□ 2.48
PFN1-201ENST00000225655 KIAA0556O60303 1618 aa30.51■■■□□ 2.47
PFN1-201ENST00000225655 PRXQ9BXM0 1461 aa30.5■■■□□ 2.47
PFN1-201ENST00000225655 UACAQ9BZF9 1416 aa30.49■■■□□ 2.47
PFN1-201ENST00000225655 ASXL2Q76L83 1435 aa30.39■■■□□ 2.46
PFN1-201ENST00000225655 PLB1Q6P1J6 1458 aa30.39■■■□□ 2.46
PFN1-201ENST00000225655 GOLGA3Q08378 1498 aa30.38■■■□□ 2.45
PFN1-201ENST00000225655 KDM5BQ9UGL1 1544 aa30.37■■■□□ 2.45
PFN1-201ENST00000225655 TSPOAP1O95153 1857 aa30.36■■■□□ 2.45
PFN1-201ENST00000225655 GLI2P10070 1586 aa30.32■■■□□ 2.45
PFN1-201ENST00000225655 ZCCHC11Q5TAX3 1644 aaKnown RBP30.31■■■□□ 2.44
PFN1-201ENST00000225655 CSRNP3Q8WYN3 585 aa30.29■■■□□ 2.44
PFN1-201ENST00000225655 KDM6BO15054 1643 aa30.27■■■□□ 2.44
PFN1-201ENST00000225655 AEBP2Q6ZN18 517 aaPredicted RBP30.26■■■□□ 2.43
PFN1-201ENST00000225655 EEA1Q15075 1411 aa30.24■■■□□ 2.43
PFN1-201ENST00000225655 ABCA8O94911 1581 aa30.22■■■□□ 2.43
PFN1-201ENST00000225655 EPRSP07814 1512 aaKnown RBP30.22■■■□□ 2.43
PFN1-201ENST00000225655 PPRC1Q5VV67 1664 aaKnown RBP30.21■■■□□ 2.43
PFN1-201ENST00000225655 MAP3K4Q9Y6R4 1608 aa30.16■■■□□ 2.42
PFN1-201ENST00000225655 WDR7Q9Y4E6 1490 aa30.15■■■□□ 2.42
PFN1-201ENST00000225655 SAMD9Q5K651 1589 aa30.1■■■□□ 2.41
PFN1-201ENST00000225655 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
PFN1-201ENST00000225655 TEX14Q8IWB6 1497 aa30.06■■■□□ 2.4
PFN1-201ENST00000225655 P3H3Q8IVL6 736 aa30.04■■■□□ 2.4
PFN1-201ENST00000225655 KIF21BO75037 1637 aa30■■■□□ 2.39
PFN1-201ENST00000225655 CFAP43Q8NDM7 1665 aa29.98■■■□□ 2.39
PFN1-201ENST00000225655 COL17A1Q9UMD9 1497 aaPredicted RBP29.95■■■□□ 2.39
PFN1-201ENST00000225655 ATP10BO94823 1461 aa29.94■■■□□ 2.38
PFN1-201ENST00000225655 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
PFN1-201ENST00000225655 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
PFN1-201ENST00000225655 MAGI3Q5TCQ9 1506 aa29.92■■■□□ 2.38
PFN1-201ENST00000225655 CD109Q6YHK3 1445 aa29.92■■■□□ 2.38
PFN1-201ENST00000225655 CHIC1Q5VXU3 224 aa29.89■■■□□ 2.38
PFN1-201ENST00000225655 ARID3CA6NKF2 412 aa29.88■■■□□ 2.37
PFN1-201ENST00000225655 RANGAP1P46060 587 aaPredicted RBP29.85■■■□□ 2.37
PFN1-201ENST00000225655 FHOD3Q2V2M9 1422 aa29.85■■■□□ 2.37
PFN1-201ENST00000225655 EFCAB5A4FU69 1503 aa29.85■■■□□ 2.37
PFN1-201ENST00000225655 KDM4FA0A1W2PPD8 638 aa29.84■■■□□ 2.37
PFN1-201ENST00000225655 NUP153P49790 1475 aaKnown RBP29.81■■■□□ 2.36
PFN1-201ENST00000225655 ABCA9Q8IUA7 1624 aa29.78■■■□□ 2.36
PFN1-201ENST00000225655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.72■■■□□ 2.35
PFN1-201ENST00000225655 HNRNPUL2Q1KMD3 747 aaKnown RBP29.72■■■□□ 2.35
PFN1-201ENST00000225655 UBTFP17480 764 aaKnown RBP29.69■■■□□ 2.34
PFN1-201ENST00000225655 ARAP3Q8WWN8 1544 aa29.69■■■□□ 2.34
PFN1-201ENST00000225655 ADGRL1O94910 1474 aa29.68■■■□□ 2.34
PFN1-201ENST00000225655 PHLDB1Q86UU1 1377 aa29.65■■■□□ 2.34
PFN1-201ENST00000225655 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
PFN1-201ENST00000225655 PLEKHD1A6NEE1 506 aa29.61■■■□□ 2.33
PFN1-201ENST00000225655 NEO1Q92859 1461 aa29.6■■■□□ 2.33
PFN1-201ENST00000225655 ARHGAP35Q9NRY4 1499 aa29.57■■■□□ 2.32
PFN1-201ENST00000225655 FMN1Q68DA7 1419 aa29.56■■■□□ 2.32
PFN1-201ENST00000225655 CDK13Q14004 1512 aaKnown RBP29.53■■■□□ 2.32
PFN1-201ENST00000225655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.5■■■□□ 2.317e-7■■□□□ 13.4
PFN1-201ENST00000225655 HECW1Q76N89 1606 aa29.5■■■□□ 2.31
PFN1-201ENST00000225655 TTC37Q6PGP7 1564 aa29.47■■■□□ 2.31
PFN1-201ENST00000225655 FRMPD1Q5SYB0 1578 aa29.45■■■□□ 2.31
PFN1-201ENST00000225655 RAPGEF3O95398 923 aa29.45■■■□□ 2.31
PFN1-201ENST00000225655 CFAP74Q9C0B2 1584 aa29.44■■■□□ 2.3
PFN1-201ENST00000225655 FANCAO15360 1455 aa29.42■■■□□ 2.3
PFN1-201ENST00000225655 ATP1B4Q9UN42 357 aaPredicted RBP29.4■■■□□ 2.3
PFN1-201ENST00000225655 AKNAQ7Z591 1439 aa29.39■■■□□ 2.3
PFN1-201ENST00000225655 RICTORQ6R327 1708 aa29.37■■■□□ 2.29
PFN1-201ENST00000225655 DENND4BO75064 1496 aaPredicted RBP29.36■■■□□ 2.29
PFN1-201ENST00000225655 CDK11AQ9UQ88 783 aaPredicted RBP29.36■■■□□ 2.29
PFN1-201ENST00000225655 LRRIQ1Q96JM4 1722 aa29.32■■■□□ 2.28
PFN1-201ENST00000225655 PLCH2O75038 1416 aa29.32■■■□□ 2.28
PFN1-201ENST00000225655 ARHGEF40Q8TER5 1519 aa29.29■■■□□ 2.28
PFN1-201ENST00000225655 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
PFN1-201ENST00000225655 MYO5CQ9NQX4 1742 aa29.28■■■□□ 2.28
PFN1-201ENST00000225655 KIF14Q15058 1648 aa29.27■■■□□ 2.28
PFN1-201ENST00000225655 ZMYM4Q5VZL5 1548 aa29.27■■■□□ 2.28
PFN1-201ENST00000225655 ADAMTSL3P82987 1691 aa29.26■■■□□ 2.27
PFN1-201ENST00000225655 CASKIN1Q8WXD9 1431 aa29.26■■■□□ 2.27
PFN1-201ENST00000225655 PCF11O94913 1555 aaKnown RBP29.26■■■□□ 2.27
PFN1-201ENST00000225655 CLIP1P30622 1438 aa29.24■■■□□ 2.27
PFN1-201ENST00000225655 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
PFN1-201ENST00000225655 CCDC18Q5T9S5 1454 aa29.22■■■□□ 2.27
PFN1-201ENST00000225655 HECW2Q9P2P5 1572 aa29.22■■■□□ 2.27
PFN1-201ENST00000225655 MAGI2Q86UL8 1455 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms