RNA–Protein interactions for RNA: ENST00000223609.10

PRUNE2-201, Transcript of prune homolog 2, humanhuman

TSL 2 BASIC

Gene PRUNE2, Length 2,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-201ENST00000223609 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
PRUNE2-201ENST00000223609 RIMBP3CA6NJZ7 1639 aa9.04□□□□□ -0.96
PRUNE2-201ENST00000223609 RIMBP3BA6NNM3 1639 aa9.04□□□□□ -0.96
PRUNE2-201ENST00000223609 RIMBP3Q9UFD9 1639 aa9.04□□□□□ -0.96
PRUNE2-201ENST00000223609 CLASP1Q7Z460 1538 aa9.04□□□□□ -0.96
PRUNE2-201ENST00000223609 ARHGEF11O15085 1522 aa9.03□□□□□ -0.96
PRUNE2-201ENST00000223609 CHMP7Q8WUX9 453 aaPredicted RBP9.02□□□□□ -0.97
PRUNE2-201ENST00000223609 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
PRUNE2-201ENST00000223609 FHAD1B1AJZ9 1412 aa9.01□□□□□ -0.97
PRUNE2-201ENST00000223609 CEP170Q5SW79 1584 aa8.99□□□□□ -0.97
PRUNE2-201ENST00000223609 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
PRUNE2-201ENST00000223609 NUP160Q12769 1436 aa8.98□□□□□ -0.97
PRUNE2-201ENST00000223609 CUL7Q14999 1698 aa8.97□□□□□ -0.97
PRUNE2-201ENST00000223609 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
PRUNE2-201ENST00000223609 ARAP1Q96P48 1450 aa8.95□□□□□ -0.98
PRUNE2-201ENST00000223609 RUSC2Q8N2Y8 1516 aa8.94□□□□□ -0.98
PRUNE2-201ENST00000223609 SHROOM2Q13796 1616 aa8.94□□□□□ -0.98
PRUNE2-201ENST00000223609 IGF1RP08069 1367 aa8.94□□□□□ -0.98
PRUNE2-201ENST00000223609 ERCC6L2Q5T890 1561 aa8.91□□□□□ -0.98
PRUNE2-201ENST00000223609 CYB5RLQ6IPT4 315 aa8.88□□□□□ -0.99
PRUNE2-201ENST00000223609 CARMIL1Q5VZK9 1371 aa8.88□□□□□ -0.99
PRUNE2-201ENST00000223609 DCAF8L1A6NGE4 600 aa8.87□□□□□ -0.99
PRUNE2-201ENST00000223609 KIAA0586Q9BVV6 1533 aa8.86□□□□□ -0.99
PRUNE2-201ENST00000223609 SLC4A1APQ9BWU0 796 aaKnown RBP8.85□□□□□ -0.99
PRUNE2-201ENST00000223609 PRG4Q92954 1404 aaPredicted RBP8.85□□□□□ -0.99
PRUNE2-201ENST00000223609 RAPGEF2Q9Y4G8 1499 aa8.85□□□□□ -0.99
PRUNE2-201ENST00000223609 IQGAP2Q13576 1575 aa8.84□□□□□ -0.99
PRUNE2-201ENST00000223609 JPH4Q96JJ6 628 aa8.82□□□□□ -1
PRUNE2-201ENST00000223609 PRXQ9BXM0 1461 aa8.81□□□□□ -1
PRUNE2-201ENST00000223609 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
PRUNE2-201ENST00000223609 EEA1Q15075 1411 aa8.79□□□□□ -1
PRUNE2-201ENST00000223609 UGGT2Q9NYU1 1516 aa8.78□□□□□ -1
PRUNE2-201ENST00000223609 DISP1Q96F81 1524 aa8.77□□□□□ -1.01
PRUNE2-201ENST00000223609 KIAA0556O60303 1618 aa8.76□□□□□ -1.01
PRUNE2-201ENST00000223609 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
PRUNE2-201ENST00000223609 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
PRUNE2-201ENST00000223609 CSRNP3Q8WYN3 585 aa8.74□□□□□ -1.01
PRUNE2-201ENST00000223609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.74□□□□□ -1.01
PRUNE2-201ENST00000223609 KIF21BO75037 1637 aa8.74□□□□□ -1.01
PRUNE2-201ENST00000223609 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
PRUNE2-201ENST00000223609 PTPRGP23470 1445 aa8.72□□□□□ -1.01
PRUNE2-201ENST00000223609 TRHP20396 242 aaPredicted RBP8.71□□□□□ -1.01
PRUNE2-201ENST00000223609 MAPKBP1O60336 1514 aa8.71□□□□□ -1.01
PRUNE2-201ENST00000223609 GOLGA3Q08378 1498 aa8.71□□□□□ -1.02
PRUNE2-201ENST00000223609 FAM9AQ8IZU1 332 aaPredicted RBP8.7□□□□□ -1.02
PRUNE2-201ENST00000223609 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
PRUNE2-201ENST00000223609 KIF13AQ9H1H9 1805 aa8.69□□□□□ -1.02
PRUNE2-201ENST00000223609 UHRF1BP1LA0JNW5 1464 aa8.69□□□□□ -1.02
PRUNE2-201ENST00000223609 SAMD9Q5K651 1589 aa8.69□□□□□ -1.02
PRUNE2-201ENST00000223609 UACAQ9BZF9 1416 aa8.68□□□□□ -1.02
PRUNE2-201ENST00000223609 TTBK1Q5TCY1 1321 aaPredicted RBP8.68□□□□□ -1.02
PRUNE2-201ENST00000223609 DIP2BQ9P265 1576 aa8.67□□□□□ -1.02
PRUNE2-201ENST00000223609 APLP2Q06481 763 aa8.67□□□□□ -1.02
PRUNE2-201ENST00000223609 ABCC10Q5T3U5 1492 aa8.66□□□□□ -1.02
PRUNE2-201ENST00000223609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.66□□□□□ -1.02
PRUNE2-201ENST00000223609 HNRNPUL2Q1KMD3 747 aaKnown RBP8.66□□□□□ -1.02
PRUNE2-201ENST00000223609 RNF39Q9H2S5 420 aa8.66□□□□□ -1.02
PRUNE2-201ENST00000223609 ABCA8O94911 1581 aa8.65□□□□□ -1.02
PRUNE2-201ENST00000223609 ZCCHC11Q5TAX3 1644 aaKnown RBP8.65□□□□□ -1.02
PRUNE2-201ENST00000223609 KDM5BQ9UGL1 1544 aa8.65□□□□□ -1.02
PRUNE2-201ENST00000223609 NPM1P06748 294 aaKnown RBP eCLIP8.65□□□□□ -1.02
PRUNE2-201ENST00000223609 C1QBPQ07021 282 aaKnown RBP8.65□□□□□ -1.02
PRUNE2-201ENST00000223609 PLB1Q6P1J6 1458 aa8.65□□□□□ -1.03
PRUNE2-201ENST00000223609 FOXD4L1Q9NU39 408 aa8.64□□□□□ -1.03
PRUNE2-201ENST00000223609 EFCAB5A4FU69 1503 aa8.63□□□□□ -1.03
PRUNE2-201ENST00000223609 ASXL2Q76L83 1435 aa8.62□□□□□ -1.03
PRUNE2-201ENST00000223609 SLC4A2P04920 1241 aa8.61□□□□□ -1.03
PRUNE2-201ENST00000223609 FHOD3Q2V2M9 1422 aa8.61□□□□□ -1.03
PRUNE2-201ENST00000223609 RAPGEF6Q8TEU7 1601 aa8.61□□□□□ -1.03
PRUNE2-201ENST00000223609 GLI2P10070 1586 aa8.6□□□□□ -1.03
PRUNE2-201ENST00000223609 P3H3Q8IVL6 736 aa8.6□□□□□ -1.03
PRUNE2-201ENST00000223609 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
PRUNE2-201ENST00000223609 MYCNP04198 464 aaPredicted RBP8.59□□□□□ -1.03
PRUNE2-201ENST00000223609 WDR7Q9Y4E6 1490 aa8.59□□□□□ -1.03
PRUNE2-201ENST00000223609 EHMT2Q96KQ7 1210 aa8.58□□□□□ -1.04
PRUNE2-201ENST00000223609 EPRSP07814 1512 aaKnown RBP8.58□□□□□ -1.04
PRUNE2-201ENST00000223609 RANGAP1P46060 587 aaPredicted RBP8.58□□□□□ -1.04
PRUNE2-201ENST00000223609 TSPOAP1O95153 1857 aa8.58□□□□□ -1.04
PRUNE2-201ENST00000223609 MAP3K4Q9Y6R4 1608 aa8.58□□□□□ -1.04
PRUNE2-201ENST00000223609 UBTFP17480 764 aaKnown RBP8.57□□□□□ -1.04
PRUNE2-201ENST00000223609 PPRC1Q5VV67 1664 aaKnown RBP8.57□□□□□ -1.04
PRUNE2-201ENST00000223609 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
PRUNE2-201ENST00000223609 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
PRUNE2-201ENST00000223609 ARHGAP35Q9NRY4 1499 aa8.57□□□□□ -1.04
PRUNE2-201ENST00000223609 SAMD1Q6SPF0 538 aaPredicted RBP8.56□□□□□ -1.04
PRUNE2-201ENST00000223609 ATP10BO94823 1461 aa8.55□□□□□ -1.04
PRUNE2-201ENST00000223609 CFAP43Q8NDM7 1665 aa8.54□□□□□ -1.04
PRUNE2-201ENST00000223609 U3KPZ7 1027 aaPredicted RBP8.54□□□□□ -1.04
PRUNE2-201ENST00000223609 KDM6BO15054 1643 aa8.53□□□□□ -1.04
PRUNE2-201ENST00000223609 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
PRUNE2-201ENST00000223609 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
PRUNE2-201ENST00000223609 HECW1Q76N89 1606 aa8.52□□□□□ -1.05
PRUNE2-201ENST00000223609 TEX14Q8IWB6 1497 aa8.51□□□□□ -1.05
PRUNE2-201ENST00000223609 ABCA9Q8IUA7 1624 aa8.5□□□□□ -1.05
PRUNE2-201ENST00000223609 CDK13Q14004 1512 aaKnown RBP8.5□□□□□ -1.05
PRUNE2-201ENST00000223609 LRRIQ1Q96JM4 1722 aa8.49□□□□□ -1.05
PRUNE2-201ENST00000223609 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
PRUNE2-201ENST00000223609 MAGI3Q5TCQ9 1506 aa8.49□□□□□ -1.05
PRUNE2-201ENST00000223609 CLIP1P30622 1438 aa8.49□□□□□ -1.05
PRUNE2-201ENST00000223609 CD109Q6YHK3 1445 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms