RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 CSRNP3Q8WYN3 585 aa24.5■■□□□ 1.51
PCOLCE-201ENST00000223061 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
PCOLCE-201ENST00000223061 KIAA0586Q9BVV6 1533 aa24.43■■□□□ 1.5
PCOLCE-201ENST00000223061 JPH4Q96JJ6 628 aa24.41■■□□□ 1.5
PCOLCE-201ENST00000223061 SHROOM2Q13796 1616 aa24.39■■□□□ 1.49
PCOLCE-201ENST00000223061 CYB5RLQ6IPT4 315 aa24.38■■□□□ 1.49
PCOLCE-201ENST00000223061 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
PCOLCE-201ENST00000223061 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
PCOLCE-201ENST00000223061 PRG4Q92954 1404 aaPredicted RBP24.36■■□□□ 1.49
PCOLCE-201ENST00000223061 IQGAP2Q13576 1575 aa24.3■■□□□ 1.48
PCOLCE-201ENST00000223061 EHMT2Q96KQ7 1210 aa24.25■■□□□ 1.47
PCOLCE-201ENST00000223061 KIF21BO75037 1637 aa24.23■■□□□ 1.47
PCOLCE-201ENST00000223061 CTTNBP2Q8WZ74 1663 aa24.21■■□□□ 1.47
PCOLCE-201ENST00000223061 CARMIL2Q6F5E8 1435 aa24.18■■□□□ 1.46
PCOLCE-201ENST00000223061 UGGT2Q9NYU1 1516 aa24.17■■□□□ 1.46
PCOLCE-201ENST00000223061 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
PCOLCE-201ENST00000223061 GOLGA3Q08378 1498 aa24.14■■□□□ 1.45
PCOLCE-201ENST00000223061 DISP1Q96F81 1524 aa24.14■■□□□ 1.45
PCOLCE-201ENST00000223061 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
PCOLCE-201ENST00000223061 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
PCOLCE-201ENST00000223061 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
PCOLCE-201ENST00000223061 PTPRGP23470 1445 aa24.09■■□□□ 1.45
PCOLCE-201ENST00000223061 KIAA0556O60303 1618 aa24.07■■□□□ 1.44
PCOLCE-201ENST00000223061 P3H3Q8IVL6 736 aa24.02■■□□□ 1.44
PCOLCE-201ENST00000223061 SAMD9Q5K651 1589 aa23.94■■□□□ 1.42
PCOLCE-201ENST00000223061 ADCY10Q96PN6 1610 aa23.93■■□□□ 1.42
PCOLCE-201ENST00000223061 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
PCOLCE-201ENST00000223061 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
PCOLCE-201ENST00000223061 FHOD3Q2V2M9 1422 aa23.88■■□□□ 1.41
PCOLCE-201ENST00000223061 EFCAB5A4FU69 1503 aa23.87■■□□□ 1.41
PCOLCE-201ENST00000223061 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
PCOLCE-201ENST00000223061 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
PCOLCE-201ENST00000223061 ABCC2Q92887 1545 aa23.85■■□□□ 1.41
PCOLCE-201ENST00000223061 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
PCOLCE-201ENST00000223061 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
PCOLCE-201ENST00000223061 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
PCOLCE-201ENST00000223061 ABCA8O94911 1581 aa23.8■■□□□ 1.4
PCOLCE-201ENST00000223061 MAPKBP1O60336 1514 aa23.74■■□□□ 1.39
PCOLCE-201ENST00000223061 KDM5BQ9UGL1 1544 aa23.74■■□□□ 1.39
PCOLCE-201ENST00000223061 ARID3CA6NKF2 412 aa23.74■■□□□ 1.39
PCOLCE-201ENST00000223061 CLIP1P30622 1438 aa23.73■■□□□ 1.39
PCOLCE-201ENST00000223061 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.38
PCOLCE-201ENST00000223061 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
PCOLCE-201ENST00000223061 ASXL2Q76L83 1435 aa23.68■■□□□ 1.38
PCOLCE-201ENST00000223061 FMN1Q68DA7 1419 aa23.67■■□□□ 1.38
PCOLCE-201ENST00000223061 CEP162Q5TB80 1403 aa23.66■■□□□ 1.38
PCOLCE-201ENST00000223061 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.38
PCOLCE-201ENST00000223061 NUP153P49790 1475 aaKnown RBP23.64■■□□□ 1.37
PCOLCE-201ENST00000223061 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.37
PCOLCE-201ENST00000223061 ATP10BO94823 1461 aa23.63■■□□□ 1.37
PCOLCE-201ENST00000223061 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
PCOLCE-201ENST00000223061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.62■■□□□ 1.37
PCOLCE-201ENST00000223061 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
PCOLCE-201ENST00000223061 DIP2BQ9P265 1576 aa23.59■■□□□ 1.37
PCOLCE-201ENST00000223061 WDR7Q9Y4E6 1490 aa23.58■■□□□ 1.36
PCOLCE-201ENST00000223061 KIF13AQ9H1H9 1805 aa23.55■■□□□ 1.36
PCOLCE-201ENST00000223061 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
PCOLCE-201ENST00000223061 EPRSP07814 1512 aaKnown RBP23.53■■□□□ 1.36
PCOLCE-201ENST00000223061 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
PCOLCE-201ENST00000223061 CDK13Q14004 1512 aaKnown RBP23.51■■□□□ 1.35
PCOLCE-201ENST00000223061 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
PCOLCE-201ENST00000223061 PCF11O94913 1555 aaKnown RBP23.5■■□□□ 1.35
PCOLCE-201ENST00000223061 GLI2P10070 1586 aa23.47■■□□□ 1.35
PCOLCE-201ENST00000223061 PLEKHD1A6NEE1 506 aa23.46■■□□□ 1.35
PCOLCE-201ENST00000223061 FYCO1Q9BQS8 1478 aa23.45■■□□□ 1.34
PCOLCE-201ENST00000223061 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.33
PCOLCE-201ENST00000223061 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
PCOLCE-201ENST00000223061 TSPOAP1O95153 1857 aa23.38■■□□□ 1.33
PCOLCE-201ENST00000223061 LRRIQ1Q96JM4 1722 aa23.37■■□□□ 1.33
PCOLCE-201ENST00000223061 MAP3K4Q9Y6R4 1608 aa23.37■■□□□ 1.33
PCOLCE-201ENST00000223061 CD109Q6YHK3 1445 aa23.36■■□□□ 1.33
PCOLCE-201ENST00000223061 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
PCOLCE-201ENST00000223061 TROQ12816 1431 aaPredicted RBP23.31■■□□□ 1.32
PCOLCE-201ENST00000223061 CFAP43Q8NDM7 1665 aa23.3■■□□□ 1.32
PCOLCE-201ENST00000223061 ABCA9Q8IUA7 1624 aa23.3■■□□□ 1.32
PCOLCE-201ENST00000223061 PPRC1Q5VV67 1664 aaKnown RBP23.3■■□□□ 1.32
PCOLCE-201ENST00000223061 TEX14Q8IWB6 1497 aa23.28■■□□□ 1.32
PCOLCE-201ENST00000223061 MAGI3Q5TCQ9 1506 aa23.27■■□□□ 1.32
PCOLCE-201ENST00000223061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.27■■□□□ 1.321e-9■■■■■ 62
PCOLCE-201ENST00000223061 TTC37Q6PGP7 1564 aa23.23■■□□□ 1.31
PCOLCE-201ENST00000223061 KIF14Q15058 1648 aa23.23■■□□□ 1.31
PCOLCE-201ENST00000223061 MTUS2Q5JR59 1369 aa23.2■■□□□ 1.3
PCOLCE-201ENST00000223061 KDM6BO15054 1643 aa23.19■■□□□ 1.3
PCOLCE-201ENST00000223061 TIAM1Q13009 1591 aa23.14■■□□□ 1.3
PCOLCE-201ENST00000223061 COL17A1Q9UMD9 1497 aaPredicted RBP23.14■■□□□ 1.3
PCOLCE-201ENST00000223061 PLCH2O75038 1416 aa23.13■■□□□ 1.29
PCOLCE-201ENST00000223061 FANCAO15360 1455 aa23.12■■□□□ 1.29
PCOLCE-201ENST00000223061 EHBP1L1Q8N3D4 1523 aa23.12■■□□□ 1.29
PCOLCE-201ENST00000223061 NEO1Q92859 1461 aa23.12■■□□□ 1.29
PCOLCE-201ENST00000223061 APLP2Q06481 763 aa23.11■■□□□ 1.29
PCOLCE-201ENST00000223061 PHLDB1Q86UU1 1377 aa23.09■■□□□ 1.29
PCOLCE-201ENST00000223061 MYO5CQ9NQX4 1742 aa23.08■■□□□ 1.29
PCOLCE-201ENST00000223061 AKNAQ7Z591 1439 aa23.07■■□□□ 1.28
PCOLCE-201ENST00000223061 ARHGAP5Q13017 1502 aa23.07■■□□□ 1.28
PCOLCE-201ENST00000223061 MAP3K1Q13233 1512 aa23.07■■□□□ 1.28
PCOLCE-201ENST00000223061 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
PCOLCE-201ENST00000223061 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
PCOLCE-201ENST00000223061 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
PCOLCE-201ENST00000223061 ARAP3Q8WWN8 1544 aa23.06■■□□□ 1.28
PCOLCE-201ENST00000223061 CFAP74Q9C0B2 1584 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms