RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 CHMP7Q8WUX9 453 aaPredicted RBP23.98■■□□□ 1.43
STX1A-201ENST00000222812 CHD1O14646 1710 aa23.95■■□□□ 1.42
STX1A-201ENST00000222812 CLIP1P30622 1438 aa23.94■■□□□ 1.42
STX1A-201ENST00000222812 CEP170Q5SW79 1584 aa23.89■■□□□ 1.42
STX1A-201ENST00000222812 ARHGAP35Q9NRY4 1499 aa23.84■■□□□ 1.41
STX1A-201ENST00000222812 IQGAP2Q13576 1575 aa23.83■■□□□ 1.4
STX1A-201ENST00000222812 NUP160Q12769 1436 aa23.81■■□□□ 1.4
STX1A-201ENST00000222812 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
STX1A-201ENST00000222812 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
STX1A-201ENST00000222812 P3H3Q8IVL6 736 aa23.77■■□□□ 1.4
STX1A-201ENST00000222812 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
STX1A-201ENST00000222812 EFCAB5A4FU69 1503 aa23.71■■□□□ 1.39
STX1A-201ENST00000222812 FHOD3Q2V2M9 1422 aa23.7■■□□□ 1.38
STX1A-201ENST00000222812 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
STX1A-201ENST00000222812 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
STX1A-201ENST00000222812 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
STX1A-201ENST00000222812 DISP1Q96F81 1524 aa23.63■■□□□ 1.37
STX1A-201ENST00000222812 KIAA0556O60303 1618 aa23.6■■□□□ 1.37
STX1A-201ENST00000222812 CLASP1Q7Z460 1538 aa23.6■■□□□ 1.37
STX1A-201ENST00000222812 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
STX1A-201ENST00000222812 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
STX1A-201ENST00000222812 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
STX1A-201ENST00000222812 PRG4Q92954 1404 aaPredicted RBP23.53■■□□□ 1.36
STX1A-201ENST00000222812 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
STX1A-201ENST00000222812 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
STX1A-201ENST00000222812 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
STX1A-201ENST00000222812 FMN1Q68DA7 1419 aa23.49■■□□□ 1.35
STX1A-201ENST00000222812 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
STX1A-201ENST00000222812 ATP1B4Q9UN42 357 aaPredicted RBP23.45■■□□□ 1.35
STX1A-201ENST00000222812 LRRIQ1Q96JM4 1722 aa23.43■■□□□ 1.34
STX1A-201ENST00000222812 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
STX1A-201ENST00000222812 FYCO1Q9BQS8 1478 aa23.41■■□□□ 1.34
STX1A-201ENST00000222812 APLP2Q06481 763 aa23.4■■□□□ 1.34
STX1A-201ENST00000222812 PLB1Q6P1J6 1458 aa23.34■■□□□ 1.33
STX1A-201ENST00000222812 KANK4Q5T7N3 995 aaPredicted RBP23.34■■□□□ 1.33
STX1A-201ENST00000222812 RAPGEF6Q8TEU7 1601 aa23.34■■□□□ 1.33
STX1A-201ENST00000222812 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
STX1A-201ENST00000222812 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.32
STX1A-201ENST00000222812 PTPRGP23470 1445 aa23.32■■□□□ 1.32
STX1A-201ENST00000222812 HECW1Q76N89 1606 aa23.32■■□□□ 1.32
STX1A-201ENST00000222812 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
STX1A-201ENST00000222812 ABCA8O94911 1581 aa23.28■■□□□ 1.32
STX1A-201ENST00000222812 MAP3K1Q13233 1512 aa23.27■■□□□ 1.32
STX1A-201ENST00000222812 NUP153P49790 1475 aaKnown RBP23.27■■□□□ 1.32
STX1A-201ENST00000222812 CDK13Q14004 1512 aaKnown RBP23.26■■□□□ 1.31
STX1A-201ENST00000222812 EPRSP07814 1512 aaKnown RBP23.25■■□□□ 1.31
STX1A-201ENST00000222812 LRRC9Q6ZRR7 1453 aa23.22■■□□□ 1.31
STX1A-201ENST00000222812 CCDC18Q5T9S5 1454 aa23.2■■□□□ 1.3
STX1A-201ENST00000222812 MAGI3Q5TCQ9 1506 aa23.18■■□□□ 1.3
STX1A-201ENST00000222812 UACAQ9BZF9 1416 aa23.18■■□□□ 1.3
STX1A-201ENST00000222812 TRIM26Q12899 539 aaPredicted RBP23.15■■□□□ 1.3
STX1A-201ENST00000222812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
STX1A-201ENST00000222812 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
STX1A-201ENST00000222812 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
STX1A-201ENST00000222812 PCGF6Q9BYE7 350 aa23.13■■□□□ 1.29
STX1A-201ENST00000222812 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
STX1A-201ENST00000222812 ATP10BO94823 1461 aa23.12■■□□□ 1.29
STX1A-201ENST00000222812 MTUS2Q5JR59 1369 aa23.12■■□□□ 1.29
STX1A-201ENST00000222812 RIMBP3CA6NJZ7 1639 aa23.09■■□□□ 1.29
STX1A-201ENST00000222812 RIMBP3BA6NNM3 1639 aa23.09■■□□□ 1.29
STX1A-201ENST00000222812 RIMBP3Q9UFD9 1639 aa23.09■■□□□ 1.29
STX1A-201ENST00000222812 ADCY10Q96PN6 1610 aa23.08■■□□□ 1.29
STX1A-201ENST00000222812 EHBP1L1Q8N3D4 1523 aa23.07■■□□□ 1.28
STX1A-201ENST00000222812 UHRF1BP1LA0JNW5 1464 aa23.05■■□□□ 1.28
STX1A-201ENST00000222812 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
STX1A-201ENST00000222812 ZCCHC11Q5TAX3 1644 aaKnown RBP23.03■■□□□ 1.28
STX1A-201ENST00000222812 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
STX1A-201ENST00000222812 NCOA2Q15596 1464 aa23■■□□□ 1.27
STX1A-201ENST00000222812 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
STX1A-201ENST00000222812 KDM5BQ9UGL1 1544 aa22.99■■□□□ 1.27
STX1A-201ENST00000222812 TROQ12816 1431 aaPredicted RBP22.98■■□□□ 1.27
STX1A-201ENST00000222812 KIF14Q15058 1648 aa22.97■■□□□ 1.27
STX1A-201ENST00000222812 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
STX1A-201ENST00000222812 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
STX1A-201ENST00000222812 HRCP23327 699 aa22.93■■□□□ 1.26
STX1A-201ENST00000222812 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
STX1A-201ENST00000222812 MYOM3Q5VTT5 1437 aa22.87■■□□□ 1.25
STX1A-201ENST00000222812 CCNB3Q8WWL7 1395 aa22.86■■□□□ 1.25
STX1A-201ENST00000222812 FGD6Q6ZV73 1430 aa22.84■■□□□ 1.25
STX1A-201ENST00000222812 KCNH8Q96L42 1107 aa22.84■■□□□ 1.25
STX1A-201ENST00000222812 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.25
STX1A-201ENST00000222812 CDC42BPAQ5VT25 1732 aa22.82■■□□□ 1.24
STX1A-201ENST00000222812 NPM1P06748 294 aaKnown RBP eCLIP22.81■■□□□ 1.24
STX1A-201ENST00000222812 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
STX1A-201ENST00000222812 TTC37Q6PGP7 1564 aa22.79■■□□□ 1.24
STX1A-201ENST00000222812 ASXL2Q76L83 1435 aa22.79■■□□□ 1.24
STX1A-201ENST00000222812 PTPN23Q9H3S7 1636 aa22.78■■□□□ 1.24
STX1A-201ENST00000222812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.78■■□□□ 1.24
STX1A-201ENST00000222812 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
STX1A-201ENST00000222812 WDR7Q9Y4E6 1490 aa22.78■■□□□ 1.24
STX1A-201ENST00000222812 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
STX1A-201ENST00000222812 ITGAEP38570 1179 aa22.77■■□□□ 1.23
STX1A-201ENST00000222812 CDC42BPBQ9Y5S2 1711 aa22.74■■□□□ 1.23
STX1A-201ENST00000222812 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
STX1A-201ENST00000222812 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
STX1A-201ENST00000222812 CFDP1Q9UEE9 299 aaPredicted RBP22.7■■□□□ 1.23
STX1A-201ENST00000222812 MYO5CQ9NQX4 1742 aa22.7■■□□□ 1.23
STX1A-201ENST00000222812 TCOF1Q13428 1488 aaKnown RBP22.7■■□□□ 1.22
STX1A-201ENST00000222812 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
STX1A-201ENST00000222812 ZNF777Q9ULD5 760 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms