RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
TGFB1-201ENST00000221930 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
TGFB1-201ENST00000221930 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
TGFB1-201ENST00000221930 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
TGFB1-201ENST00000221930 CTTNBP2Q8WZ74 1663 aa22.56■■□□□ 1.2
TGFB1-201ENST00000221930 ARHGAP35Q9NRY4 1499 aa22.56■■□□□ 1.2
TGFB1-201ENST00000221930 MIER1Q8N108 512 aa22.55■■□□□ 1.2
TGFB1-201ENST00000221930 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
TGFB1-201ENST00000221930 EFCAB5A4FU69 1503 aa22.53■■□□□ 1.2
TGFB1-201ENST00000221930 WDR62O43379 1518 aa22.51■■□□□ 1.19
TGFB1-201ENST00000221930 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
TGFB1-201ENST00000221930 ITGAEP38570 1179 aa22.49■■□□□ 1.19
TGFB1-201ENST00000221930 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
TGFB1-201ENST00000221930 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
TGFB1-201ENST00000221930 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
TGFB1-201ENST00000221930 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
TGFB1-201ENST00000221930 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
TGFB1-201ENST00000221930 CLSPNQ9HAW4 1339 aa22.41■■□□□ 1.18
TGFB1-201ENST00000221930 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
TGFB1-201ENST00000221930 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.18
TGFB1-201ENST00000221930 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.174e-7■■■□□ 18.9
TGFB1-201ENST00000221930 BCL11AQ9H165 835 aa22.37■■□□□ 1.17
TGFB1-201ENST00000221930 P3H3Q8IVL6 736 aa22.36■■□□□ 1.17
TGFB1-201ENST00000221930 CFAP43Q8NDM7 1665 aa22.33■■□□□ 1.17
TGFB1-201ENST00000221930 SAMD9Q5K651 1589 aa22.33■■□□□ 1.17
TGFB1-201ENST00000221930 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
TGFB1-201ENST00000221930 THOC2Q8NI27 1593 aaKnown RBP22.32■■□□□ 1.16
TGFB1-201ENST00000221930 TIAM1Q13009 1591 aa22.3■■□□□ 1.16
TGFB1-201ENST00000221930 ATP1B4Q9UN42 357 aaPredicted RBP22.3■■□□□ 1.16
TGFB1-201ENST00000221930 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
TGFB1-201ENST00000221930 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
TGFB1-201ENST00000221930 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
TGFB1-201ENST00000221930 PRKCSHP14314 528 aaPredicted RBP22.26■■□□□ 1.15
TGFB1-201ENST00000221930 RAB3GAP2Q9H2M9 1393 aa22.24■■□□□ 1.15
TGFB1-201ENST00000221930 LRRC9Q6ZRR7 1453 aa22.23■■□□□ 1.15
TGFB1-201ENST00000221930 FMN1Q68DA7 1419 aa22.22■■□□□ 1.15
TGFB1-201ENST00000221930 PHLDB1Q86UU1 1377 aa22.22■■□□□ 1.15
TGFB1-201ENST00000221930 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
TGFB1-201ENST00000221930 FAM50AQ14320 339 aaKnown RBP22.21■■□□□ 1.15
TGFB1-201ENST00000221930 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
TGFB1-201ENST00000221930 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
TGFB1-201ENST00000221930 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
TGFB1-201ENST00000221930 EIF4G3O43432 1585 aaKnown RBP22.15■■□□□ 1.14
TGFB1-201ENST00000221930 IQGAP2Q13576 1575 aa22.15■■□□□ 1.14
TGFB1-201ENST00000221930 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
TGFB1-201ENST00000221930 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
TGFB1-201ENST00000221930 SETD5Q9C0A6 1442 aa22.11■■□□□ 1.13
TGFB1-201ENST00000221930 MAPKBP1O60336 1514 aa22.1■■□□□ 1.13
TGFB1-201ENST00000221930 UGGT2Q9NYU1 1516 aa22.1■■□□□ 1.13
TGFB1-201ENST00000221930 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
TGFB1-201ENST00000221930 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
TGFB1-201ENST00000221930 KIAA0586Q9BVV6 1533 aa22.03■■□□□ 1.12
TGFB1-201ENST00000221930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.121e-6■■■■□ 19.8
TGFB1-201ENST00000221930 CCDC18Q5T9S5 1454 aa22.01■■□□□ 1.11
TGFB1-201ENST00000221930 GRIN2AQ12879 1464 aa22■■□□□ 1.11
TGFB1-201ENST00000221930 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
TGFB1-201ENST00000221930 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
TGFB1-201ENST00000221930 LRRIQ1Q96JM4 1722 aa21.96■■□□□ 1.11
TGFB1-201ENST00000221930 EHBP1L1Q8N3D4 1523 aa21.95■■□□□ 1.1
TGFB1-201ENST00000221930 ERICH6Q7L0X2 663 aa21.94■■□□□ 1.1
TGFB1-201ENST00000221930 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
TGFB1-201ENST00000221930 KCNH8Q96L42 1107 aa21.9■■□□□ 1.1
TGFB1-201ENST00000221930 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
TGFB1-201ENST00000221930 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.1
TGFB1-201ENST00000221930 NUP160Q12769 1436 aa21.87■■□□□ 1.09
TGFB1-201ENST00000221930 FGD6Q6ZV73 1430 aa21.87■■□□□ 1.09
TGFB1-201ENST00000221930 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
TGFB1-201ENST00000221930 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
TGFB1-201ENST00000221930 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
TGFB1-201ENST00000221930 CEP170Q5SW79 1584 aa21.84■■□□□ 1.09
TGFB1-201ENST00000221930 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
TGFB1-201ENST00000221930 PTPRKQ15262 1439 aa21.81■■□□□ 1.08
TGFB1-201ENST00000221930 ANP32EQ9BTT0 268 aa21.8■■□□□ 1.08
TGFB1-201ENST00000221930 PPP1R15AO75807 674 aaPredicted RBP21.79■■□□□ 1.08
TGFB1-201ENST00000221930 EPRSP07814 1512 aaKnown RBP21.78■■□□□ 1.08
TGFB1-201ENST00000221930 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.08
TGFB1-201ENST00000221930 TIMELESSQ9UNS1 1208 aa21.76■■□□□ 1.07
TGFB1-201ENST00000221930 NCOA2Q15596 1464 aa21.76■■□□□ 1.07
TGFB1-201ENST00000221930 SUPT16HQ9Y5B9 1047 aaKnown RBP21.75■■□□□ 1.07
TGFB1-201ENST00000221930 MYOM3Q5VTT5 1437 aa21.73■■□□□ 1.07
TGFB1-201ENST00000221930 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
TGFB1-201ENST00000221930 TCOF1Q13428 1488 aaKnown RBP21.71■■□□□ 1.07
TGFB1-201ENST00000221930 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
TGFB1-201ENST00000221930 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
TGFB1-201ENST00000221930 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
TGFB1-201ENST00000221930 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
TGFB1-201ENST00000221930 MAGI3Q5TCQ9 1506 aa21.68■■□□□ 1.06
TGFB1-201ENST00000221930 CHIC2Q9UKJ5 165 aa21.68■■□□□ 1.06
TGFB1-201ENST00000221930 NAIPQ13075 1403 aa21.68■■□□□ 1.06
TGFB1-201ENST00000221930 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
TGFB1-201ENST00000221930 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
TGFB1-201ENST00000221930 PTPN23Q9H3S7 1636 aa21.67■■□□□ 1.06
TGFB1-201ENST00000221930 RRP7BPQ9NSQ0 103 aa21.66■■□□□ 1.06
TGFB1-201ENST00000221930 ADCY10Q96PN6 1610 aa21.65■■□□□ 1.06
TGFB1-201ENST00000221930 NUP153P49790 1475 aaKnown RBP21.64■■□□□ 1.05
TGFB1-201ENST00000221930 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
TGFB1-201ENST00000221930 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
TGFB1-201ENST00000221930 CHD1O14646 1710 aa21.59■■□□□ 1.05
TGFB1-201ENST00000221930 ABCA8O94911 1581 aa21.59■■□□□ 1.05
TGFB1-201ENST00000221930 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms