RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 AQRO60306 1485 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC113-201ENST00000219299 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
CCDC113-201ENST00000219299 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
CCDC113-201ENST00000219299 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
CCDC113-201ENST00000219299 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
CCDC113-201ENST00000219299 IGF1RP08069 1367 aa13.41□□□□□ -0.26
CCDC113-201ENST00000219299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC113-201ENST00000219299 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
CCDC113-201ENST00000219299 CARMIL2Q6F5E8 1435 aa13.41□□□□□ -0.26
CCDC113-201ENST00000219299 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
CCDC113-201ENST00000219299 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
CCDC113-201ENST00000219299 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
CCDC113-201ENST00000219299 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
CCDC113-201ENST00000219299 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
CCDC113-201ENST00000219299 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
CCDC113-201ENST00000219299 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
CCDC113-201ENST00000219299 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
CCDC113-201ENST00000219299 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
CCDC113-201ENST00000219299 BCANQ96GW7 911 aa13.33□□□□□ -0.28
CCDC113-201ENST00000219299 FHOD3Q2V2M9 1422 aa13.32□□□□□ -0.28
CCDC113-201ENST00000219299 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
CCDC113-201ENST00000219299 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
CCDC113-201ENST00000219299 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
CCDC113-201ENST00000219299 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
CCDC113-201ENST00000219299 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
CCDC113-201ENST00000219299 CUX1P39880 1505 aa13.29□□□□□ -0.28
CCDC113-201ENST00000219299 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
CCDC113-201ENST00000219299 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
CCDC113-201ENST00000219299 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
CCDC113-201ENST00000219299 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
CCDC113-201ENST00000219299 GRIN2BQ13224 1484 aa13.25□□□□□ -0.29
CCDC113-201ENST00000219299 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
CCDC113-201ENST00000219299 PTPRGP23470 1445 aa13.24□□□□□ -0.29
CCDC113-201ENST00000219299 ARID4BQ4LE39 1312 aaPredicted RBP13.23□□□□□ -0.29
CCDC113-201ENST00000219299 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
CCDC113-201ENST00000219299 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
CCDC113-201ENST00000219299 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
CCDC113-201ENST00000219299 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
CCDC113-201ENST00000219299 KDM2AQ9Y2K7 1162 aa13.16□□□□□ -0.3
CCDC113-201ENST00000219299 EFCAB2Q5VUJ9 269 aa13.16□□□□□ -0.3
CCDC113-201ENST00000219299 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
CCDC113-201ENST00000219299 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
CCDC113-201ENST00000219299 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
CCDC113-201ENST00000219299 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
CCDC113-201ENST00000219299 MLECQ14165 292 aa13.12□□□□□ -0.31
CCDC113-201ENST00000219299 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
CCDC113-201ENST00000219299 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
CCDC113-201ENST00000219299 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
CCDC113-201ENST00000219299 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
CCDC113-201ENST00000219299 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC113-201ENST00000219299 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
CCDC113-201ENST00000219299 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.31
CCDC113-201ENST00000219299 PRG4Q92954 1404 aaPredicted RBP13.08□□□□□ -0.32
CCDC113-201ENST00000219299 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
CCDC113-201ENST00000219299 GGT6Q6P531 493 aa13.08□□□□□ -0.32
CCDC113-201ENST00000219299 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
CCDC113-201ENST00000219299 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
CCDC113-201ENST00000219299 PPP1R15AO75807 674 aaPredicted RBP13.02□□□□□ -0.33
CCDC113-201ENST00000219299 SIN3AQ96ST3 1273 aa13.02□□□□□ -0.33
CCDC113-201ENST00000219299 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
CCDC113-201ENST00000219299 FAM69CQ0P6D2 419 aa13.01□□□□□ -0.33
CCDC113-201ENST00000219299 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
CCDC113-201ENST00000219299 ACIN1Q9UKV3 1341 aaKnown RBP13□□□□□ -0.33
CCDC113-201ENST00000219299 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
CCDC113-201ENST00000219299 ANP32CO43423 234 aa13□□□□□ -0.33
CCDC113-201ENST00000219299 KIF21BO75037 1637 aa12.99□□□□□ -0.33
CCDC113-201ENST00000219299 ARAP1Q96P48 1450 aa12.99□□□□□ -0.33
CCDC113-201ENST00000219299 KIF3BO15066 747 aa12.98□□□□□ -0.33
CCDC113-201ENST00000219299 FOXD1Q16676 465 aa12.97□□□□□ -0.33
CCDC113-201ENST00000219299 SYNJ2O15056 1496 aa12.97□□□□□ -0.33
CCDC113-201ENST00000219299 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
CCDC113-201ENST00000219299 KIAA0586Q9BVV6 1533 aa12.96□□□□□ -0.33
CCDC113-201ENST00000219299 ANKRD30AQ9BXX3 1397 aa12.95□□□□□ -0.34
CCDC113-201ENST00000219299 PKD2Q13563 968 aa12.95□□□□□ -0.34
CCDC113-201ENST00000219299 SETD5Q9C0A6 1442 aa12.95□□□□□ -0.34
CCDC113-201ENST00000219299 ZNF644Q9H582 1327 aaPredicted RBP12.95□□□□□ -0.34
CCDC113-201ENST00000219299 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
CCDC113-201ENST00000219299 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
CCDC113-201ENST00000219299 KANK1Q14678 1352 aa12.94□□□□□ -0.34
CCDC113-201ENST00000219299 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
CCDC113-201ENST00000219299 NUP155O75694 1391 aa12.93□□□□□ -0.34
CCDC113-201ENST00000219299 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
CCDC113-201ENST00000219299 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
CCDC113-201ENST00000219299 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
CCDC113-201ENST00000219299 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC113-201ENST00000219299 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
CCDC113-201ENST00000219299 MPHOSPH9Q99550 1183 aa12.89□□□□□ -0.35
CCDC113-201ENST00000219299 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
CCDC113-201ENST00000219299 WASHC2CQ9Y4E1 1318 aa12.87□□□□□ -0.35
CCDC113-201ENST00000219299 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
CCDC113-201ENST00000219299 PHLDB1Q86UU1 1377 aa12.86□□□□□ -0.35
CCDC113-201ENST00000219299 AFAP1Q8N556 730 aa12.86□□□□□ -0.35
CCDC113-201ENST00000219299 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
CCDC113-201ENST00000219299 CARD11Q9BXL7 1154 aa12.85□□□□□ -0.35
CCDC113-201ENST00000219299 IQGAP2Q13576 1575 aa12.85□□□□□ -0.35
CCDC113-201ENST00000219299 LRRC9Q6ZRR7 1453 aa12.85□□□□□ -0.35
CCDC113-201ENST00000219299 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
CCDC113-201ENST00000219299 CUL7Q14999 1698 aa12.83□□□□□ -0.36
CCDC113-201ENST00000219299 CLSPNQ9HAW4 1339 aa12.83□□□□□ -0.36
CCDC113-201ENST00000219299 UACAQ9BZF9 1416 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms