RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
RIPK3-201ENST00000216274 IGF1RP08069 1367 aa20.11■□□□□ 0.81
RIPK3-201ENST00000216274 NUP160Q12769 1436 aa20.07■□□□□ 0.8
RIPK3-201ENST00000216274 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
RIPK3-201ENST00000216274 CEP170Q5SW79 1584 aa20.02■□□□□ 0.8
RIPK3-201ENST00000216274 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
RIPK3-201ENST00000216274 RIMBP3CA6NJZ7 1639 aa20.01■□□□□ 0.79
RIPK3-201ENST00000216274 RIMBP3BA6NNM3 1639 aa20.01■□□□□ 0.79
RIPK3-201ENST00000216274 RIMBP3Q9UFD9 1639 aa20.01■□□□□ 0.79
RIPK3-201ENST00000216274 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
RIPK3-201ENST00000216274 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
RIPK3-201ENST00000216274 RAPGEF2Q9Y4G8 1499 aa19.91■□□□□ 0.78
RIPK3-201ENST00000216274 KIAA0586Q9BVV6 1533 aa19.89■□□□□ 0.77
RIPK3-201ENST00000216274 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
RIPK3-201ENST00000216274 CLIP1P30622 1438 aa19.86■□□□□ 0.77
RIPK3-201ENST00000216274 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
RIPK3-201ENST00000216274 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
RIPK3-201ENST00000216274 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
RIPK3-201ENST00000216274 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
RIPK3-201ENST00000216274 IQGAP2Q13576 1575 aa19.77■□□□□ 0.76
RIPK3-201ENST00000216274 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
RIPK3-201ENST00000216274 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
RIPK3-201ENST00000216274 VPS8Q8N3P4 1428 aa19.76■□□□□ 0.75
RIPK3-201ENST00000216274 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
RIPK3-201ENST00000216274 CTTNBP2Q8WZ74 1663 aa19.74■□□□□ 0.75
RIPK3-201ENST00000216274 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
RIPK3-201ENST00000216274 CARMIL2Q6F5E8 1435 aa19.66■□□□□ 0.74
RIPK3-201ENST00000216274 DISP1Q96F81 1524 aa19.61■□□□□ 0.73
RIPK3-201ENST00000216274 APLP2Q06481 763 aa19.61■□□□□ 0.73
RIPK3-201ENST00000216274 KIAA0556O60303 1618 aa19.59■□□□□ 0.73
RIPK3-201ENST00000216274 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.72
RIPK3-201ENST00000216274 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
RIPK3-201ENST00000216274 PTPRGP23470 1445 aa19.55■□□□□ 0.72
RIPK3-201ENST00000216274 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
RIPK3-201ENST00000216274 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
RIPK3-201ENST00000216274 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
RIPK3-201ENST00000216274 UHRF1BP1LA0JNW5 1464 aa19.46■□□□□ 0.71
RIPK3-201ENST00000216274 CCER1Q8TC90 406 aaPredicted RBP19.44■□□□□ 0.7
RIPK3-201ENST00000216274 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
RIPK3-201ENST00000216274 EFCAB5A4FU69 1503 aa19.43■□□□□ 0.7
RIPK3-201ENST00000216274 ABCC2Q92887 1545 aa19.42■□□□□ 0.7
RIPK3-201ENST00000216274 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
RIPK3-201ENST00000216274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
RIPK3-201ENST00000216274 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
RIPK3-201ENST00000216274 ABCA8O94911 1581 aa19.37■□□□□ 0.69
RIPK3-201ENST00000216274 KDM5BQ9UGL1 1544 aa19.35■□□□□ 0.69
RIPK3-201ENST00000216274 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
RIPK3-201ENST00000216274 PLB1Q6P1J6 1458 aa19.34■□□□□ 0.69
RIPK3-201ENST00000216274 TRHP20396 242 aaPredicted RBP19.32■□□□□ 0.68
RIPK3-201ENST00000216274 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
RIPK3-201ENST00000216274 FHOD3Q2V2M9 1422 aa19.3■□□□□ 0.68
RIPK3-201ENST00000216274 ZCCHC11Q5TAX3 1644 aaKnown RBP19.29■□□□□ 0.68
RIPK3-201ENST00000216274 ABCC10Q5T3U5 1492 aa19.28■□□□□ 0.68
RIPK3-201ENST00000216274 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.68
RIPK3-201ENST00000216274 RAPGEF6Q8TEU7 1601 aa19.27■□□□□ 0.68
RIPK3-201ENST00000216274 KIF13AQ9H1H9 1805 aa19.27■□□□□ 0.68
RIPK3-201ENST00000216274 TIAM1Q13009 1591 aa19.26■□□□□ 0.67
RIPK3-201ENST00000216274 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
RIPK3-201ENST00000216274 DIP2BQ9P265 1576 aa19.25■□□□□ 0.67
RIPK3-201ENST00000216274 ASXL2Q76L83 1435 aa19.24■□□□□ 0.67
RIPK3-201ENST00000216274 RRBP1Q9P2E9 1410 aaKnown RBP19.24■□□□□ 0.67
RIPK3-201ENST00000216274 FMN1Q68DA7 1419 aa19.22■□□□□ 0.67
RIPK3-201ENST00000216274 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
RIPK3-201ENST00000216274 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
RIPK3-201ENST00000216274 FYCO1Q9BQS8 1478 aa19.2■□□□□ 0.66
RIPK3-201ENST00000216274 GLI2P10070 1586 aa19.19■□□□□ 0.66
RIPK3-201ENST00000216274 NUP153P49790 1475 aaKnown RBP19.19■□□□□ 0.66
RIPK3-201ENST00000216274 WDR7Q9Y4E6 1490 aa19.18■□□□□ 0.66
RIPK3-201ENST00000216274 ATP10BO94823 1461 aa19.17■□□□□ 0.66
RIPK3-201ENST00000216274 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
RIPK3-201ENST00000216274 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
RIPK3-201ENST00000216274 FAM69CQ0P6D2 419 aa19.17■□□□□ 0.66
RIPK3-201ENST00000216274 CCNB3Q8WWL7 1395 aa19.15■□□□□ 0.66
RIPK3-201ENST00000216274 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.66
RIPK3-201ENST00000216274 HECW1Q76N89 1606 aa19.13■□□□□ 0.65
RIPK3-201ENST00000216274 MAP3K4Q9Y6R4 1608 aa19.08■□□□□ 0.65
RIPK3-201ENST00000216274 ARID3CA6NKF2 412 aa19.04■□□□□ 0.64
RIPK3-201ENST00000216274 ATP1B4Q9UN42 357 aaPredicted RBP19.04■□□□□ 0.64
RIPK3-201ENST00000216274 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
RIPK3-201ENST00000216274 CLSPNQ9HAW4 1339 aa19.03■□□□□ 0.64
RIPK3-201ENST00000216274 PPRC1Q5VV67 1664 aaKnown RBP19.03■□□□□ 0.64
RIPK3-201ENST00000216274 CDK13Q14004 1512 aaKnown RBP19.02■□□□□ 0.63
RIPK3-201ENST00000216274 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
RIPK3-201ENST00000216274 PLEKHD1A6NEE1 506 aa19.01■□□□□ 0.63
RIPK3-201ENST00000216274 ABCA9Q8IUA7 1624 aa19■□□□□ 0.63
RIPK3-201ENST00000216274 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
RIPK3-201ENST00000216274 PHLDB1Q86UU1 1377 aa19■□□□□ 0.63
RIPK3-201ENST00000216274 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
RIPK3-201ENST00000216274 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
RIPK3-201ENST00000216274 KCNH8Q96L42 1107 aa18.98■□□□□ 0.63
RIPK3-201ENST00000216274 CDK11AQ9UQ88 783 aaPredicted RBP18.98■□□□□ 0.63
RIPK3-201ENST00000216274 CD109Q6YHK3 1445 aa18.98■□□□□ 0.63
RIPK3-201ENST00000216274 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
RIPK3-201ENST00000216274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
RIPK3-201ENST00000216274 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
RIPK3-201ENST00000216274 TROQ12816 1431 aaPredicted RBP18.92■□□□□ 0.62
RIPK3-201ENST00000216274 KDM6BO15054 1643 aa18.92■□□□□ 0.62
RIPK3-201ENST00000216274 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
RIPK3-201ENST00000216274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.62
RIPK3-201ENST00000216274 ITGAEP38570 1179 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms