RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
UPK3A-201ENST00000216211 IGF1RP08069 1367 aa26.17■■□□□ 1.78
UPK3A-201ENST00000216211 KIAA0586Q9BVV6 1533 aa26.06■■□□□ 1.76
UPK3A-201ENST00000216211 KIF13AQ9H1H9 1805 aa26.03■■□□□ 1.76
UPK3A-201ENST00000216211 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
UPK3A-201ENST00000216211 ADCY10Q96PN6 1610 aa25.96■■□□□ 1.75
UPK3A-201ENST00000216211 NPM1P06748 294 aaKnown RBP eCLIP25.88■■□□□ 1.73
UPK3A-201ENST00000216211 MAPKBP1O60336 1514 aa25.87■■□□□ 1.73
UPK3A-201ENST00000216211 IQGAP2Q13576 1575 aa25.86■■□□□ 1.73
UPK3A-201ENST00000216211 ABCC10Q5T3U5 1492 aa25.81■■□□□ 1.72
UPK3A-201ENST00000216211 DIP2BQ9P265 1576 aa25.81■■□□□ 1.72
UPK3A-201ENST00000216211 TTBK1Q5TCY1 1321 aaPredicted RBP25.8■■□□□ 1.72
UPK3A-201ENST00000216211 PTPRGP23470 1445 aa25.8■■□□□ 1.72
UPK3A-201ENST00000216211 CARMIL2Q6F5E8 1435 aa25.8■■□□□ 1.72
UPK3A-201ENST00000216211 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
UPK3A-201ENST00000216211 FAM69CQ0P6D2 419 aa25.78■■□□□ 1.72
UPK3A-201ENST00000216211 TNIKQ9UKE5 1360 aa25.76■■□□□ 1.71
UPK3A-201ENST00000216211 DISP1Q96F81 1524 aa25.72■■□□□ 1.71
UPK3A-201ENST00000216211 TSPOAP1O95153 1857 aa25.71■■□□□ 1.71
UPK3A-201ENST00000216211 CTTNBP2Q8WZ74 1663 aa25.69■■□□□ 1.7
UPK3A-201ENST00000216211 UGGT2Q9NYU1 1516 aa25.68■■□□□ 1.7
UPK3A-201ENST00000216211 ABCC2Q92887 1545 aa25.67■■□□□ 1.7
UPK3A-201ENST00000216211 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
UPK3A-201ENST00000216211 KIAA0556O60303 1618 aa25.65■■□□□ 1.7
UPK3A-201ENST00000216211 UHRF1BP1LA0JNW5 1464 aa25.62■■□□□ 1.69
UPK3A-201ENST00000216211 UACAQ9BZF9 1416 aa25.62■■□□□ 1.69
UPK3A-201ENST00000216211 ASXL2Q76L83 1435 aa25.57■■□□□ 1.68
UPK3A-201ENST00000216211 KDM6BO15054 1643 aa25.57■■□□□ 1.68
UPK3A-201ENST00000216211 PLB1Q6P1J6 1458 aa25.54■■□□□ 1.68
UPK3A-201ENST00000216211 ZCCHC11Q5TAX3 1644 aaKnown RBP25.54■■□□□ 1.68
UPK3A-201ENST00000216211 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
UPK3A-201ENST00000216211 KDM5BQ9UGL1 1544 aa25.51■■□□□ 1.67
UPK3A-201ENST00000216211 GLI2P10070 1586 aa25.51■■□□□ 1.67
UPK3A-201ENST00000216211 PPRC1Q5VV67 1664 aaKnown RBP25.51■■□□□ 1.67
UPK3A-201ENST00000216211 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
UPK3A-201ENST00000216211 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
UPK3A-201ENST00000216211 MAP3K4Q9Y6R4 1608 aa25.41■■□□□ 1.66
UPK3A-201ENST00000216211 ABCA8O94911 1581 aa25.39■■□□□ 1.65
UPK3A-201ENST00000216211 CSRNP3Q8WYN3 585 aa25.34■■□□□ 1.65
UPK3A-201ENST00000216211 WDR7Q9Y4E6 1490 aa25.34■■□□□ 1.65
UPK3A-201ENST00000216211 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
UPK3A-201ENST00000216211 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
UPK3A-201ENST00000216211 SAMD9Q5K651 1589 aa25.27■■□□□ 1.64
UPK3A-201ENST00000216211 EEA1Q15075 1411 aa25.25■■□□□ 1.63
UPK3A-201ENST00000216211 COL17A1Q9UMD9 1497 aaPredicted RBP25.25■■□□□ 1.63
UPK3A-201ENST00000216211 CFAP43Q8NDM7 1665 aa25.25■■□□□ 1.63
UPK3A-201ENST00000216211 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
UPK3A-201ENST00000216211 KCNH8Q96L42 1107 aa25.21■■□□□ 1.63
UPK3A-201ENST00000216211 ARID3CA6NKF2 412 aa25.18■■□□□ 1.62
UPK3A-201ENST00000216211 FAM9AQ8IZU1 332 aaPredicted RBP25.18■■□□□ 1.62
UPK3A-201ENST00000216211 RAPGEF6Q8TEU7 1601 aa25.17■■□□□ 1.62
UPK3A-201ENST00000216211 CD109Q6YHK3 1445 aa25.17■■□□□ 1.62
UPK3A-201ENST00000216211 ATP10BO94823 1461 aa25.15■■□□□ 1.62
UPK3A-201ENST00000216211 MAGI3Q5TCQ9 1506 aa25.15■■□□□ 1.62
UPK3A-201ENST00000216211 RANGAP1P46060 587 aaPredicted RBP25.13■■□□□ 1.61
UPK3A-201ENST00000216211 KIF21BO75037 1637 aa25.12■■□□□ 1.61
UPK3A-201ENST00000216211 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
UPK3A-201ENST00000216211 ADGRL1O94910 1474 aa25.07■■□□□ 1.6
UPK3A-201ENST00000216211 ABCA9Q8IUA7 1624 aa25.04■■□□□ 1.6
UPK3A-201ENST00000216211 NUP153P49790 1475 aaKnown RBP25.02■■□□□ 1.6
UPK3A-201ENST00000216211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.01■■□□□ 1.59
UPK3A-201ENST00000216211 HNRNPUL2Q1KMD3 747 aaKnown RBP25.01■■□□□ 1.59
UPK3A-201ENST00000216211 EFCAB5A4FU69 1503 aa24.99■■□□□ 1.59
UPK3A-201ENST00000216211 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
UPK3A-201ENST00000216211 EHMT2Q96KQ7 1210 aa24.96■■□□□ 1.59
UPK3A-201ENST00000216211 ARAP3Q8WWN8 1544 aa24.95■■□□□ 1.58
UPK3A-201ENST00000216211 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
UPK3A-201ENST00000216211 NEO1Q92859 1461 aa24.85■■□□□ 1.57
UPK3A-201ENST00000216211 PHLDB1Q86UU1 1377 aa24.85■■□□□ 1.57
UPK3A-201ENST00000216211 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
UPK3A-201ENST00000216211 CDK13Q14004 1512 aaKnown RBP24.82■■□□□ 1.56
UPK3A-201ENST00000216211 FRMPD1Q5SYB0 1578 aa24.81■■□□□ 1.56
UPK3A-201ENST00000216211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.56
UPK3A-201ENST00000216211 RAPGEF3O95398 923 aa24.8■■□□□ 1.56
UPK3A-201ENST00000216211 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
UPK3A-201ENST00000216211 ARHGAP35Q9NRY4 1499 aa24.79■■□□□ 1.56
UPK3A-201ENST00000216211 CFAP74Q9C0B2 1584 aa24.76■■□□□ 1.55
UPK3A-201ENST00000216211 HECW1Q76N89 1606 aa24.76■■□□□ 1.55
UPK3A-201ENST00000216211 FMN1Q68DA7 1419 aa24.75■■□□□ 1.55
UPK3A-201ENST00000216211 RICTORQ6R327 1708 aa24.75■■□□□ 1.55
UPK3A-201ENST00000216211 HECW2Q9P2P5 1572 aa24.72■■□□□ 1.55
UPK3A-201ENST00000216211 FANCAO15360 1455 aa24.72■■□□□ 1.55
UPK3A-201ENST00000216211 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
UPK3A-201ENST00000216211 AKNAQ7Z591 1439 aa24.71■■□□□ 1.55
UPK3A-201ENST00000216211 LRRIQ1Q96JM4 1722 aa24.7■■□□□ 1.54
UPK3A-201ENST00000216211 DENND4BO75064 1496 aaPredicted RBP24.69■■□□□ 1.54
UPK3A-201ENST00000216211 ADAMTSL3P82987 1691 aa24.68■■□□□ 1.54
UPK3A-201ENST00000216211 BCORL1Q5H9F3 1711 aa24.66■■□□□ 1.54
UPK3A-201ENST00000216211 ARHGEF40Q8TER5 1519 aa24.66■■□□□ 1.54
UPK3A-201ENST00000216211 MYO5CQ9NQX4 1742 aa24.65■■□□□ 1.54
UPK3A-201ENST00000216211 KIF14Q15058 1648 aa24.63■■□□□ 1.53
UPK3A-201ENST00000216211 PLCH2O75038 1416 aa24.61■■□□□ 1.53
UPK3A-201ENST00000216211 MADDQ8WXG6 1647 aa24.59■■□□□ 1.53
UPK3A-201ENST00000216211 ZMYM4Q5VZL5 1548 aa24.59■■□□□ 1.53
UPK3A-201ENST00000216211 ARID4BQ4LE39 1312 aaPredicted RBP24.59■■□□□ 1.53
UPK3A-201ENST00000216211 CDK11AQ9UQ88 783 aaPredicted RBP24.58■■□□□ 1.53
UPK3A-201ENST00000216211 PTPRMP28827 1452 aa24.58■■□□□ 1.52
UPK3A-201ENST00000216211 PCF11O94913 1555 aaKnown RBP24.56■■□□□ 1.52
UPK3A-201ENST00000216211 ZFYVE16Q7Z3T8 1539 aa24.56■■□□□ 1.52
UPK3A-201ENST00000216211 SIGLEC1Q9BZZ2 1709 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms