RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 CUL7Q14999 1698 aa34.63■■■■□ 3.13
SYNGR1-201ENST00000216155 IGF1RP08069 1367 aa34.62■■■■□ 3.13
SYNGR1-201ENST00000216155 KIF13AQ9H1H9 1805 aa34.58■■■■□ 3.13
SYNGR1-201ENST00000216155 KIAA0586Q9BVV6 1533 aa34.55■■■■□ 3.12
SYNGR1-201ENST00000216155 ADCY10Q96PN6 1610 aa34.48■■■■□ 3.11
SYNGR1-201ENST00000216155 MAPKBP1O60336 1514 aa34.43■■■■□ 3.1
SYNGR1-201ENST00000216155 ABCC10Q5T3U5 1492 aa34.39■■■■□ 3.1
SYNGR1-201ENST00000216155 CARMIL1Q5VZK9 1371 aa34.38■■■■□ 3.09
SYNGR1-201ENST00000216155 DIP2BQ9P265 1576 aa34.35■■■■□ 3.09
SYNGR1-201ENST00000216155 NPM1P06748 294 aaKnown RBP eCLIP34.33■■■■□ 3.09
SYNGR1-201ENST00000216155 AEBP2Q6ZN18 517 aaPredicted RBP34.32■■■■□ 3.08
SYNGR1-201ENST00000216155 FAM69CQ0P6D2 419 aa34.29■■■■□ 3.08
SYNGR1-201ENST00000216155 IQGAP2Q13576 1575 aa34.25■■■■□ 3.07
SYNGR1-201ENST00000216155 PTPRGP23470 1445 aa34.21■■■■□ 3.07
SYNGR1-201ENST00000216155 CARMIL2Q6F5E8 1435 aa34.18■■■■□ 3.06
SYNGR1-201ENST00000216155 TNIKQ9UKE5 1360 aa34.17■■■■□ 3.06
SYNGR1-201ENST00000216155 ABCC2Q92887 1545 aa34.1■■■■□ 3.05
SYNGR1-201ENST00000216155 TTBK1Q5TCY1 1321 aaPredicted RBP34.1■■■■□ 3.05
SYNGR1-201ENST00000216155 DISP1Q96F81 1524 aa34.09■■■■□ 3.05
SYNGR1-201ENST00000216155 RAPGEF2Q9Y4G8 1499 aa34.09■■■■□ 3.05
SYNGR1-201ENST00000216155 TSPOAP1O95153 1857 aa34.06■■■■□ 3.04
SYNGR1-201ENST00000216155 KDM6BO15054 1643 aa34.04■■■■□ 3.04
SYNGR1-201ENST00000216155 UGGT2Q9NYU1 1516 aa34.03■■■■□ 3.04
SYNGR1-201ENST00000216155 UHRF1BP1LA0JNW5 1464 aa34.02■■■■□ 3.04
SYNGR1-201ENST00000216155 ASXL2Q76L83 1435 aa33.98■■■■□ 3.03
SYNGR1-201ENST00000216155 UACAQ9BZF9 1416 aa33.98■■■■□ 3.03
SYNGR1-201ENST00000216155 KIAA0556O60303 1618 aa33.96■■■■□ 3.03
SYNGR1-201ENST00000216155 PLB1Q6P1J6 1458 aa33.95■■■■□ 3.02
SYNGR1-201ENST00000216155 GLI2P10070 1586 aa33.92■■■■□ 3.02
SYNGR1-201ENST00000216155 PPRC1Q5VV67 1664 aaKnown RBP33.89■■■■□ 3.02
SYNGR1-201ENST00000216155 KDM5BQ9UGL1 1544 aa33.89■■■■□ 3.02
SYNGR1-201ENST00000216155 CTTNBP2Q8WZ74 1663 aa33.88■■■■□ 3.01
SYNGR1-201ENST00000216155 ZCCHC11Q5TAX3 1644 aaKnown RBP33.84■■■■□ 3.01
SYNGR1-201ENST00000216155 EPRSP07814 1512 aaKnown RBP33.79■■■■□ 3
SYNGR1-201ENST00000216155 MAP3K4Q9Y6R4 1608 aa33.75■■■□□ 2.99
SYNGR1-201ENST00000216155 PRXQ9BXM0 1461 aa33.75■■■□□ 2.99
SYNGR1-201ENST00000216155 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
SYNGR1-201ENST00000216155 KDM4FA0A1W2PPD8 638 aa33.68■■■□□ 2.98
SYNGR1-201ENST00000216155 ABCA8O94911 1581 aa33.65■■■□□ 2.98
SYNGR1-201ENST00000216155 WDR7Q9Y4E6 1490 aa33.65■■■□□ 2.98
SYNGR1-201ENST00000216155 COL17A1Q9UMD9 1497 aaPredicted RBP33.62■■■□□ 2.97
SYNGR1-201ENST00000216155 TEX14Q8IWB6 1497 aa33.61■■■□□ 2.97
SYNGR1-201ENST00000216155 CFAP43Q8NDM7 1665 aa33.48■■■□□ 2.95
SYNGR1-201ENST00000216155 ADGRL1O94910 1474 aa33.44■■■□□ 2.94
SYNGR1-201ENST00000216155 MAGI3Q5TCQ9 1506 aa33.43■■■□□ 2.94
SYNGR1-201ENST00000216155 CD109Q6YHK3 1445 aa33.41■■■□□ 2.94
SYNGR1-201ENST00000216155 SAMD9Q5K651 1589 aa33.39■■■□□ 2.94
SYNGR1-201ENST00000216155 CSRNP3Q8WYN3 585 aa33.37■■■□□ 2.93
SYNGR1-201ENST00000216155 KCNH8Q96L42 1107 aa33.37■■■□□ 2.93
SYNGR1-201ENST00000216155 P3H3Q8IVL6 736 aa33.34■■■□□ 2.93
SYNGR1-201ENST00000216155 ATP10BO94823 1461 aa33.32■■■□□ 2.92
SYNGR1-201ENST00000216155 ARID3CA6NKF2 412 aa33.29■■■□□ 2.92
SYNGR1-201ENST00000216155 EEA1Q15075 1411 aa33.27■■■□□ 2.92
SYNGR1-201ENST00000216155 RAPGEF6Q8TEU7 1601 aa33.26■■■□□ 2.91
SYNGR1-201ENST00000216155 FAM9AQ8IZU1 332 aaPredicted RBP33.23■■■□□ 2.91
SYNGR1-201ENST00000216155 ABCA9Q8IUA7 1624 aa33.21■■■□□ 2.91
SYNGR1-201ENST00000216155 ARAP3Q8WWN8 1544 aa33.16■■■□□ 2.9
SYNGR1-201ENST00000216155 NUP153P49790 1475 aaKnown RBP33.14■■■□□ 2.9
SYNGR1-201ENST00000216155 FHOD3Q2V2M9 1422 aa33.13■■■□□ 2.89
SYNGR1-201ENST00000216155 KIF21BO75037 1637 aa33.12■■■□□ 2.89
SYNGR1-201ENST00000216155 RANGAP1P46060 587 aaPredicted RBP33.07■■■□□ 2.88
SYNGR1-201ENST00000216155 HECW2Q9P2P5 1572 aa33.04■■■□□ 2.88
SYNGR1-201ENST00000216155 PHLDB1Q86UU1 1377 aa33.03■■■□□ 2.88
SYNGR1-201ENST00000216155 EFCAB5A4FU69 1503 aa33.02■■■□□ 2.88
SYNGR1-201ENST00000216155 NEO1Q92859 1461 aa33.01■■■□□ 2.88
SYNGR1-201ENST00000216155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.01■■■□□ 2.87
SYNGR1-201ENST00000216155 HNRNPUL2Q1KMD3 747 aaKnown RBP33.01■■■□□ 2.87
SYNGR1-201ENST00000216155 FRMPD1Q5SYB0 1578 aa32.96■■■□□ 2.87
SYNGR1-201ENST00000216155 RAPGEF3O95398 923 aa32.92■■■□□ 2.86
SYNGR1-201ENST00000216155 PLEKHD1A6NEE1 506 aa32.85■■■□□ 2.85
SYNGR1-201ENST00000216155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.85■■■□□ 2.85
SYNGR1-201ENST00000216155 ADAMTSL3P82987 1691 aa32.84■■■□□ 2.85
SYNGR1-201ENST00000216155 TTC37Q6PGP7 1564 aa32.83■■■□□ 2.85
SYNGR1-201ENST00000216155 CDK13Q14004 1512 aaKnown RBP32.82■■■□□ 2.84
SYNGR1-201ENST00000216155 CFAP74Q9C0B2 1584 aa32.81■■■□□ 2.84
SYNGR1-201ENST00000216155 RICTORQ6R327 1708 aa32.8■■■□□ 2.84
SYNGR1-201ENST00000216155 ARHGEF40Q8TER5 1519 aa32.79■■■□□ 2.84
SYNGR1-201ENST00000216155 FANCAO15360 1455 aa32.79■■■□□ 2.84
SYNGR1-201ENST00000216155 BCORL1Q5H9F3 1711 aa32.77■■■□□ 2.84
SYNGR1-201ENST00000216155 AKNAQ7Z591 1439 aa32.77■■■□□ 2.84
SYNGR1-201ENST00000216155 DENND4BO75064 1496 aaPredicted RBP32.76■■■□□ 2.84
SYNGR1-201ENST00000216155 PTPRMP28827 1452 aa32.74■■■□□ 2.83
SYNGR1-201ENST00000216155 EHMT2Q96KQ7 1210 aa32.72■■■□□ 2.83
SYNGR1-201ENST00000216155 ILDR1Q86SU0 546 aaPredicted RBP32.71■■■□□ 2.83
SYNGR1-201ENST00000216155 ARHGAP35Q9NRY4 1499 aa32.71■■■□□ 2.83
SYNGR1-201ENST00000216155 HECW1Q76N89 1606 aa32.7■■■□□ 2.83
SYNGR1-201ENST00000216155 UBTFP17480 764 aaKnown RBP32.7■■■□□ 2.83
SYNGR1-201ENST00000216155 MADDQ8WXG6 1647 aa32.69■■■□□ 2.82
SYNGR1-201ENST00000216155 FMN1Q68DA7 1419 aa32.68■■■□□ 2.82
SYNGR1-201ENST00000216155 ZMYM4Q5VZL5 1548 aa32.68■■■□□ 2.82
SYNGR1-201ENST00000216155 CHIC1Q5VXU3 224 aa32.68■■■□□ 2.82
SYNGR1-201ENST00000216155 ARID4BQ4LE39 1312 aaPredicted RBP32.64■■■□□ 2.82
SYNGR1-201ENST00000216155 ZFYVE16Q7Z3T8 1539 aa32.6■■■□□ 2.81
SYNGR1-201ENST00000216155 PLCH2O75038 1416 aa32.6■■■□□ 2.81
SYNGR1-201ENST00000216155 SIGLEC1Q9BZZ2 1709 aa32.58■■■□□ 2.81
SYNGR1-201ENST00000216155 YEATS2Q9ULM3 1422 aa32.58■■■□□ 2.81
SYNGR1-201ENST00000216155 RIMS1Q86UR5 1692 aaKnown RBP32.56■■■□□ 2.8
SYNGR1-201ENST00000216155 POGZQ7Z3K3 1410 aa32.56■■■□□ 2.8
SYNGR1-201ENST00000216155 MYO5CQ9NQX4 1742 aa32.56■■■□□ 2.8
SYNGR1-201ENST00000216155 KIF14Q15058 1648 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms