RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 FBLN2P98095 1184 aa25.41■■□□□ 1.66
SNRPD3-201ENST00000215829 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
SNRPD3-201ENST00000215829 NUP160Q12769 1436 aa25.3■■□□□ 1.64
SNRPD3-201ENST00000215829 KIAA0586Q9BVV6 1533 aa25.3■■□□□ 1.64
SNRPD3-201ENST00000215829 CHD1O14646 1710 aa25.29■■□□□ 1.64
SNRPD3-201ENST00000215829 CEP170Q5SW79 1584 aa25.29■■□□□ 1.64
SNRPD3-201ENST00000215829 IQGAP2Q13576 1575 aa25.28■■□□□ 1.64
SNRPD3-201ENST00000215829 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
SNRPD3-201ENST00000215829 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
SNRPD3-201ENST00000215829 ARAP1Q96P48 1450 aa25.22■■□□□ 1.63
SNRPD3-201ENST00000215829 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
SNRPD3-201ENST00000215829 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
SNRPD3-201ENST00000215829 SAMD9Q5K651 1589 aa25.17■■□□□ 1.62
SNRPD3-201ENST00000215829 P3H3Q8IVL6 736 aa25.14■■□□□ 1.62
SNRPD3-201ENST00000215829 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
SNRPD3-201ENST00000215829 FHOD3Q2V2M9 1422 aa25.1■■□□□ 1.61
SNRPD3-201ENST00000215829 DISP1Q96F81 1524 aa25.06■■□□□ 1.6
SNRPD3-201ENST00000215829 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
SNRPD3-201ENST00000215829 KIAA0556O60303 1618 aa25.02■■□□□ 1.6
SNRPD3-201ENST00000215829 FMN1Q68DA7 1419 aa25■■□□□ 1.59
SNRPD3-201ENST00000215829 CARMIL2Q6F5E8 1435 aa24.99■■□□□ 1.59
SNRPD3-201ENST00000215829 SHROOM2Q13796 1616 aa24.98■■□□□ 1.59
SNRPD3-201ENST00000215829 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
SNRPD3-201ENST00000215829 PRG4Q92954 1404 aaPredicted RBP24.95■■□□□ 1.58
SNRPD3-201ENST00000215829 APLP2Q06481 763 aa24.92■■□□□ 1.58
SNRPD3-201ENST00000215829 CASKIN1Q8WXD9 1431 aa24.91■■□□□ 1.58
SNRPD3-201ENST00000215829 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
SNRPD3-201ENST00000215829 FYCO1Q9BQS8 1478 aa24.89■■□□□ 1.57
SNRPD3-201ENST00000215829 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
SNRPD3-201ENST00000215829 ATP1B4Q9UN42 357 aaPredicted RBP24.83■■□□□ 1.57
SNRPD3-201ENST00000215829 TTBK1Q5TCY1 1321 aaPredicted RBP24.83■■□□□ 1.57
SNRPD3-201ENST00000215829 MAP3K1Q13233 1512 aa24.81■■□□□ 1.56
SNRPD3-201ENST00000215829 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
SNRPD3-201ENST00000215829 PTPRGP23470 1445 aa24.78■■□□□ 1.56
SNRPD3-201ENST00000215829 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
SNRPD3-201ENST00000215829 HECW1Q76N89 1606 aa24.75■■□□□ 1.55
SNRPD3-201ENST00000215829 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
SNRPD3-201ENST00000215829 PLB1Q6P1J6 1458 aa24.72■■□□□ 1.55
SNRPD3-201ENST00000215829 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
SNRPD3-201ENST00000215829 LRRIQ1Q96JM4 1722 aa24.71■■□□□ 1.55
SNRPD3-201ENST00000215829 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
SNRPD3-201ENST00000215829 ABCA8O94911 1581 aa24.7■■□□□ 1.54
SNRPD3-201ENST00000215829 CCDC18Q5T9S5 1454 aa24.69■■□□□ 1.54
SNRPD3-201ENST00000215829 NUP153P49790 1475 aaKnown RBP24.68■■□□□ 1.54
SNRPD3-201ENST00000215829 EPRSP07814 1512 aaKnown RBP24.68■■□□□ 1.54
SNRPD3-201ENST00000215829 LRRC9Q6ZRR7 1453 aa24.66■■□□□ 1.54
SNRPD3-201ENST00000215829 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
SNRPD3-201ENST00000215829 UACAQ9BZF9 1416 aa24.63■■□□□ 1.53
SNRPD3-201ENST00000215829 CDK13Q14004 1512 aaKnown RBP24.6■■□□□ 1.53
SNRPD3-201ENST00000215829 ARID3CA6NKF2 412 aa24.59■■□□□ 1.53
SNRPD3-201ENST00000215829 MTUS2Q5JR59 1369 aa24.56■■□□□ 1.52
SNRPD3-201ENST00000215829 ABCC2Q92887 1545 aa24.55■■□□□ 1.52
SNRPD3-201ENST00000215829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
SNRPD3-201ENST00000215829 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
SNRPD3-201ENST00000215829 UHRF1BP1LA0JNW5 1464 aa24.53■■□□□ 1.52
SNRPD3-201ENST00000215829 ATP10BO94823 1461 aa24.53■■□□□ 1.52
SNRPD3-201ENST00000215829 CDK11AQ9UQ88 783 aaPredicted RBP24.52■■□□□ 1.52
SNRPD3-201ENST00000215829 MAGI3Q5TCQ9 1506 aa24.52■■□□□ 1.52
SNRPD3-201ENST00000215829 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
SNRPD3-201ENST00000215829 ARHGEF11O15085 1522 aa24.51■■□□□ 1.51
SNRPD3-201ENST00000215829 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
SNRPD3-201ENST00000215829 SUPT6HQ7KZ85 1726 aaKnown RBP24.44■■□□□ 1.5
SNRPD3-201ENST00000215829 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
SNRPD3-201ENST00000215829 ADCY10Q96PN6 1610 aa24.43■■□□□ 1.5
SNRPD3-201ENST00000215829 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
SNRPD3-201ENST00000215829 KDM5BQ9UGL1 1544 aa24.42■■□□□ 1.5
SNRPD3-201ENST00000215829 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
SNRPD3-201ENST00000215829 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
SNRPD3-201ENST00000215829 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
SNRPD3-201ENST00000215829 PHLDB1Q86UU1 1377 aa24.41■■□□□ 1.5
SNRPD3-201ENST00000215829 NCOA2Q15596 1464 aa24.41■■□□□ 1.5
SNRPD3-201ENST00000215829 ZCCHC11Q5TAX3 1644 aaKnown RBP24.38■■□□□ 1.49
SNRPD3-201ENST00000215829 RRBP1Q9P2E9 1410 aaKnown RBP24.36■■□□□ 1.49
SNRPD3-201ENST00000215829 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
SNRPD3-201ENST00000215829 CYB5RLQ6IPT4 315 aa24.31■■□□□ 1.48
SNRPD3-201ENST00000215829 MYOM3Q5VTT5 1437 aa24.3■■□□□ 1.48
SNRPD3-201ENST00000215829 KIF14Q15058 1648 aa24.29■■□□□ 1.48
SNRPD3-201ENST00000215829 NPM1P06748 294 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNRPD3-201ENST00000215829 FGD6Q6ZV73 1430 aa24.26■■□□□ 1.47
SNRPD3-201ENST00000215829 ABCC10Q5T3U5 1492 aa24.22■■□□□ 1.47
SNRPD3-201ENST00000215829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.21■■□□□ 1.47
SNRPD3-201ENST00000215829 MIA2Q96PC5 1412 aa24.21■■□□□ 1.47
SNRPD3-201ENST00000215829 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
SNRPD3-201ENST00000215829 GPATCH8Q9UKJ3 1502 aaKnown RBP24.19■■□□□ 1.46
SNRPD3-201ENST00000215829 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
SNRPD3-201ENST00000215829 KCNH8Q96L42 1107 aa24.19■■□□□ 1.46
SNRPD3-201ENST00000215829 ASXL2Q76L83 1435 aa24.18■■□□□ 1.46
SNRPD3-201ENST00000215829 PTPN23Q9H3S7 1636 aa24.16■■□□□ 1.46
SNRPD3-201ENST00000215829 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
SNRPD3-201ENST00000215829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.463e-6■■■■□ 23.4
SNRPD3-201ENST00000215829 TCOF1Q13428 1488 aaKnown RBP24.14■■□□□ 1.46
SNRPD3-201ENST00000215829 CDC42BPAQ5VT25 1732 aa24.13■■□□□ 1.45
SNRPD3-201ENST00000215829 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
SNRPD3-201ENST00000215829 TTC37Q6PGP7 1564 aa24.11■■□□□ 1.45
SNRPD3-201ENST00000215829 ITGAEP38570 1179 aa24.08■■□□□ 1.44
SNRPD3-201ENST00000215829 MAPKBP1O60336 1514 aa24.08■■□□□ 1.44
SNRPD3-201ENST00000215829 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
SNRPD3-201ENST00000215829 ZNF644Q9H582 1327 aaPredicted RBP24.05■■□□□ 1.44
SNRPD3-201ENST00000215829 MYO5CQ9NQX4 1742 aa24.05■■□□□ 1.44
SNRPD3-201ENST00000215829 CDC42BPBQ9Y5S2 1711 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms