RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 PLEKHD1A6NEE1 506 aa15.74■□□□□ 0.11
TTC17-201ENST00000039989 CUX1P39880 1505 aa15.73■□□□□ 0.11
TTC17-201ENST00000039989 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
TTC17-201ENST00000039989 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
TTC17-201ENST00000039989 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
TTC17-201ENST00000039989 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
TTC17-201ENST00000039989 CFDP1Q9UEE9 299 aaPredicted RBP15.66■□□□□ 0.1
TTC17-201ENST00000039989 POLA1P09884 1462 aaPredicted RBP15.65■□□□□ 0.1
TTC17-201ENST00000039989 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
TTC17-201ENST00000039989 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
TTC17-201ENST00000039989 TSPY4P0CV99 314 aa15.62■□□□□ 0.09
TTC17-201ENST00000039989 TSPY10P0CW01 314 aa15.62■□□□□ 0.09
TTC17-201ENST00000039989 HIRIP3Q9BW71 556 aaPredicted RBP15.59■□□□□ 0.09
TTC17-201ENST00000039989 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
TTC17-201ENST00000039989 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
TTC17-201ENST00000039989 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
TTC17-201ENST00000039989 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
TTC17-201ENST00000039989 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
TTC17-201ENST00000039989 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
TTC17-201ENST00000039989 TOP2BQ02880 1626 aa15.54■□□□□ 0.08
TTC17-201ENST00000039989 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
TTC17-201ENST00000039989 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
TTC17-201ENST00000039989 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
TTC17-201ENST00000039989 CARMIL2Q6F5E8 1435 aa15.5■□□□□ 0.07
TTC17-201ENST00000039989 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
TTC17-201ENST00000039989 SIN3AQ96ST3 1273 aa15.5■□□□□ 0.07
TTC17-201ENST00000039989 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
TTC17-201ENST00000039989 CCNB3Q8WWL7 1395 aa15.48■□□□□ 0.07
TTC17-201ENST00000039989 FOXD1Q16676 465 aa15.47■□□□□ 0.07
TTC17-201ENST00000039989 BCANQ96GW7 911 aa15.47■□□□□ 0.07
TTC17-201ENST00000039989 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
TTC17-201ENST00000039989 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
TTC17-201ENST00000039989 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
TTC17-201ENST00000039989 GRIN2BQ13224 1484 aa15.44■□□□□ 0.06
TTC17-201ENST00000039989 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
TTC17-201ENST00000039989 SNAPC4Q5SXM2 1469 aa15.43■□□□□ 0.06
TTC17-201ENST00000039989 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
TTC17-201ENST00000039989 ARAP1Q96P48 1450 aa15.42■□□□□ 0.06
TTC17-201ENST00000039989 ESF1Q9H501 851 aaKnown RBP15.42■□□□□ 0.06
TTC17-201ENST00000039989 PRXQ9BXM0 1461 aa15.41■□□□□ 0.06
TTC17-201ENST00000039989 TONSLQ96HA7 1378 aa15.41■□□□□ 0.06
TTC17-201ENST00000039989 PTPRGP23470 1445 aa15.41■□□□□ 0.06
TTC17-201ENST00000039989 MLECQ14165 292 aa15.4■□□□□ 0.06
TTC17-201ENST00000039989 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
TTC17-201ENST00000039989 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
TTC17-201ENST00000039989 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
TTC17-201ENST00000039989 KIF21BO75037 1637 aa15.37■□□□□ 0.05
TTC17-201ENST00000039989 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
TTC17-201ENST00000039989 ARID4BQ4LE39 1312 aaPredicted RBP15.36■□□□□ 0.05
TTC17-201ENST00000039989 ARHGAP35Q9NRY4 1499 aa15.36■□□□□ 0.05
TTC17-201ENST00000039989 CENPBP07199 599 aaPredicted RBP15.35■□□□□ 0.05
TTC17-201ENST00000039989 ABCA10Q8WWZ4 1543 aa15.34■□□□□ 0.05
TTC17-201ENST00000039989 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
TTC17-201ENST00000039989 PRG4Q92954 1404 aaPredicted RBP15.31■□□□□ 0.04
TTC17-201ENST00000039989 GGT6Q6P531 493 aa15.31■□□□□ 0.04
TTC17-201ENST00000039989 PHLDB1Q86UU1 1377 aa15.26■□□□□ 0.03
TTC17-201ENST00000039989 RAB3GAP2Q9H2M9 1393 aa15.26■□□□□ 0.03
TTC17-201ENST00000039989 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
TTC17-201ENST00000039989 EFCAB2Q5VUJ9 269 aa15.25■□□□□ 0.03
TTC17-201ENST00000039989 KIF21AQ7Z4S6 1674 aa15.24■□□□□ 0.03
TTC17-201ENST00000039989 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
TTC17-201ENST00000039989 SENP3-EIF4A1A0A087X0R7 540 aa15.21■□□□□ 0.03
TTC17-201ENST00000039989 PKD2Q13563 968 aa15.2■□□□□ 0.02
TTC17-201ENST00000039989 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
TTC17-201ENST00000039989 SETD5Q9C0A6 1442 aa15.19■□□□□ 0.02
TTC17-201ENST00000039989 KIF3BO15066 747 aa15.18■□□□□ 0.02
TTC17-201ENST00000039989 CCDC18Q5T9S5 1454 aa15.17■□□□□ 0.02
TTC17-201ENST00000039989 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
TTC17-201ENST00000039989 FAM69CQ0P6D2 419 aa15.16■□□□□ 0.02
TTC17-201ENST00000039989 ANP32CO43423 234 aa15.16■□□□□ 0.02
TTC17-201ENST00000039989 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
TTC17-201ENST00000039989 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
TTC17-201ENST00000039989 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
TTC17-201ENST00000039989 PLB1Q6P1J6 1458 aa15.14■□□□□ 0.01
TTC17-201ENST00000039989 NUP155O75694 1391 aa15.14■□□□□ 0.01
TTC17-201ENST00000039989 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
TTC17-201ENST00000039989 CDK13Q14004 1512 aaKnown RBP15.13■□□□□ 0.01
TTC17-201ENST00000039989 LRRC9Q6ZRR7 1453 aa15.13■□□□□ 0.01
TTC17-201ENST00000039989 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
TTC17-201ENST00000039989 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
TTC17-201ENST00000039989 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
TTC17-201ENST00000039989 CASKIN1Q8WXD9 1431 aa15.12■□□□□ 0.01
TTC17-201ENST00000039989 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
TTC17-201ENST00000039989 MIER1Q8N108 512 aa15.1■□□□□ 0.01
TTC17-201ENST00000039989 PPP1R15AO75807 674 aaPredicted RBP15.08■□□□□ 0.01
TTC17-201ENST00000039989 NCOA2Q15596 1464 aa15.08■□□□□ 0
TTC17-201ENST00000039989 SALL2Q9Y467 1007 aaPredicted RBP15.07■□□□□ 0
TTC17-201ENST00000039989 IQGAP2Q13576 1575 aa15.06■□□□□ 0
TTC17-201ENST00000039989 FGD6Q6ZV73 1430 aa15.06■□□□□ 0
TTC17-201ENST00000039989 ANKRD30AQ9BXX3 1397 aa15.06■□□□□ 0
TTC17-201ENST00000039989 EIF4G2P78344 907 aaKnown RBP eCLIP15.06■□□□□ 0
TTC17-201ENST00000039989 SAFB2Q14151 953 aaKnown RBP eCLIP15.05■□□□□ 01e-6■■■■□ 20.9
TTC17-201ENST00000039989 CARD11Q9BXL7 1154 aa15.05■□□□□ -0
TTC17-201ENST00000039989 NEFLP07196 543 aa15.04■□□□□ -0
TTC17-201ENST00000039989 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
TTC17-201ENST00000039989 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
TTC17-201ENST00000039989 RAPGEF3O95398 923 aa15.02■□□□□ -0
TTC17-201ENST00000039989 FAM9BQ8IZU0 186 aa15.02□□□□□ -0.01
TTC17-201ENST00000039989 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
TTC17-201ENST00000039989 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms