RNA–Protein interactions for RNA: ENST00000023897.10

GABRA1-201, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 2,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-201ENST00000023897 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
GABRA1-201ENST00000023897 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
GABRA1-201ENST00000023897 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
GABRA1-201ENST00000023897 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
GABRA1-201ENST00000023897 LRRC9Q6ZRR7 1453 aa21.61■■□□□ 1.05
GABRA1-201ENST00000023897 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
GABRA1-201ENST00000023897 PELP1Q8IZL8 1130 aaKnown RBP21.56■■□□□ 1.04
GABRA1-201ENST00000023897 NESP48681 1621 aa21.56■■□□□ 1.04
GABRA1-201ENST00000023897 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
GABRA1-201ENST00000023897 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.04
GABRA1-201ENST00000023897 ABCA5Q8WWZ7 1642 aa21.51■■□□□ 1.03
GABRA1-201ENST00000023897 MIER1Q8N108 512 aa21.49■■□□□ 1.03
GABRA1-201ENST00000023897 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
GABRA1-201ENST00000023897 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
GABRA1-201ENST00000023897 GTF3C3Q9Y5Q9 886 aa21.46■■□□□ 1.03
GABRA1-201ENST00000023897 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.02
GABRA1-201ENST00000023897 FHOD3Q2V2M9 1422 aa21.45■■□□□ 1.02
GABRA1-201ENST00000023897 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
GABRA1-201ENST00000023897 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
GABRA1-201ENST00000023897 SETD5Q9C0A6 1442 aa21.42■■□□□ 1.02
GABRA1-201ENST00000023897 SAMD9Q5K651 1589 aa21.42■■□□□ 1.02
GABRA1-201ENST00000023897 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
GABRA1-201ENST00000023897 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
GABRA1-201ENST00000023897 ITGAEP38570 1179 aa21.39■■□□□ 1.01
GABRA1-201ENST00000023897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.38■■□□□ 1.01
GABRA1-201ENST00000023897 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
GABRA1-201ENST00000023897 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
GABRA1-201ENST00000023897 LRRIQ1Q96JM4 1722 aa21.35■■□□□ 1.01
GABRA1-201ENST00000023897 THOC2Q8NI27 1593 aaKnown RBP21.34■■□□□ 1.01
GABRA1-201ENST00000023897 GAPVD1Q14C86 1478 aa21.34■■□□□ 1.01
GABRA1-201ENST00000023897 P3H3Q8IVL6 736 aa21.34■■□□□ 1.01
GABRA1-201ENST00000023897 YTHDC1Q96MU7 727 aaKnown RBP21.34■■□□□ 1.01
GABRA1-201ENST00000023897 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
GABRA1-201ENST00000023897 PBRM1Q86U86 1689 aa21.3■■□□□ 1
GABRA1-201ENST00000023897 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
GABRA1-201ENST00000023897 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
GABRA1-201ENST00000023897 SUPT6HQ7KZ85 1726 aaKnown RBP21.25■□□□□ 0.99
GABRA1-201ENST00000023897 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
GABRA1-201ENST00000023897 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
GABRA1-201ENST00000023897 FGD6Q6ZV73 1430 aa21.24■□□□□ 0.99
GABRA1-201ENST00000023897 EHBP1L1Q8N3D4 1523 aa21.22■□□□□ 0.99
GABRA1-201ENST00000023897 MTUS2Q5JR59 1369 aa21.18■□□□□ 0.98
GABRA1-201ENST00000023897 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
GABRA1-201ENST00000023897 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
GABRA1-201ENST00000023897 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
GABRA1-201ENST00000023897 CCDC18Q5T9S5 1454 aa21.15■□□□□ 0.98
GABRA1-201ENST00000023897 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
GABRA1-201ENST00000023897 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
GABRA1-201ENST00000023897 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
GABRA1-201ENST00000023897 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
GABRA1-201ENST00000023897 ARHGEF11O15085 1522 aa21.12■□□□□ 0.97
GABRA1-201ENST00000023897 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
GABRA1-201ENST00000023897 UGGT2Q9NYU1 1516 aa21.11■□□□□ 0.97
GABRA1-201ENST00000023897 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.97
GABRA1-201ENST00000023897 GCC2Q8IWJ2 1684 aa21.07■□□□□ 0.96
GABRA1-201ENST00000023897 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
GABRA1-201ENST00000023897 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
GABRA1-201ENST00000023897 MAGI3Q5TCQ9 1506 aa21.05■□□□□ 0.96
GABRA1-201ENST00000023897 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
GABRA1-201ENST00000023897 TCOF1Q13428 1488 aaKnown RBP21.03■□□□□ 0.96
GABRA1-201ENST00000023897 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
GABRA1-201ENST00000023897 NAIPQ13075 1403 aa21.01■□□□□ 0.95
GABRA1-201ENST00000023897 WDR62O43379 1518 aa21■□□□□ 0.95
GABRA1-201ENST00000023897 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
GABRA1-201ENST00000023897 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
GABRA1-201ENST00000023897 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
GABRA1-201ENST00000023897 AKNAQ7Z591 1439 aa20.95■□□□□ 0.94
GABRA1-201ENST00000023897 TONSLQ96HA7 1378 aa20.93■□□□□ 0.94
GABRA1-201ENST00000023897 MIA2Q96PC5 1412 aa20.92■□□□□ 0.94
GABRA1-201ENST00000023897 KIAA0556O60303 1618 aa20.91■□□□□ 0.94
GABRA1-201ENST00000023897 CDK13Q14004 1512 aaKnown RBP20.9■□□□□ 0.94
GABRA1-201ENST00000023897 KIAA0586Q9BVV6 1533 aa20.86■□□□□ 0.93
GABRA1-201ENST00000023897 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
GABRA1-201ENST00000023897 KDM5BQ9UGL1 1544 aa20.85■□□□□ 0.93
GABRA1-201ENST00000023897 ZNF608Q9ULD9 1512 aaPredicted RBP20.85■□□□□ 0.93
GABRA1-201ENST00000023897 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
GABRA1-201ENST00000023897 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
GABRA1-201ENST00000023897 DISP1Q96F81 1524 aa20.82■□□□□ 0.92
GABRA1-201ENST00000023897 KDM6BO15054 1643 aa20.81■□□□□ 0.92
GABRA1-201ENST00000023897 DNMT1P26358 1616 aaKnown RBP20.81■□□□□ 0.92
GABRA1-201ENST00000023897 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
GABRA1-201ENST00000023897 DENND4BO75064 1496 aaPredicted RBP20.77■□□□□ 0.92
GABRA1-201ENST00000023897 CCER2I3L3R5 266 aa20.76■□□□□ 0.91
GABRA1-201ENST00000023897 SUPT16HQ9Y5B9 1047 aaKnown RBP20.76■□□□□ 0.91
GABRA1-201ENST00000023897 ITSN2Q9NZM3 1697 aa20.75■□□□□ 0.91
GABRA1-201ENST00000023897 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
GABRA1-201ENST00000023897 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
GABRA1-201ENST00000023897 RRP7BPQ9NSQ0 103 aa20.74■□□□□ 0.91
GABRA1-201ENST00000023897 ROCK1Q13464 1354 aa20.74■□□□□ 0.91
GABRA1-201ENST00000023897 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
GABRA1-201ENST00000023897 DAPK1P53355 1430 aa20.73■□□□□ 0.91
GABRA1-201ENST00000023897 ADCY10Q96PN6 1610 aa20.72■□□□□ 0.91
GABRA1-201ENST00000023897 ADGBQ8N7X0 1667 aa20.72■□□□□ 0.91
GABRA1-201ENST00000023897 ANP32CO43423 234 aa20.71■□□□□ 0.91
GABRA1-201ENST00000023897 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
GABRA1-201ENST00000023897 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
GABRA1-201ENST00000023897 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
GABRA1-201ENST00000023897 CROCC2H7BZ55 1655 aa20.66■□□□□ 0.9
GABRA1-201ENST00000023897 TRIM52Q96A61 297 aa20.66■□□□□ 0.9
GABRA1-201ENST00000023897 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms