RNA–Protein interactions for RNA: ENSMUST00000209085.1

Smarca2-246, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 1,841 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-246ENSMUST00000209085 Tmem132aQ922P8 1018 aa9.91□□□□□ -0.82
Smarca2-246ENSMUST00000209085 Gm38655A0A286YDK6 273 aa9.88□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Mier1Q5UAK0 511 aa9.88□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Cers3Q1A3B0 383 aa9.86□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Ifnlr1Q8CGK5 535 aa9.85□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Dnajc5bQ9CQ94 199 aa9.85□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Hs6st3Q9QYK4 470 aa9.84□□□□□ -0.83
Smarca2-246ENSMUST00000209085 NclP09405 707 aaKnown RBP9.84□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Skap1Q3UUV5 355 aa9.84□□□□□ -0.83
Smarca2-246ENSMUST00000209085 Wdr66E9Q743 1299 aa9.82□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Anp32aO35381 247 aa9.82□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Znf316Q6PGE4 1016 aa9.82□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Kiaa1211Q5PR69 1207 aa9.8□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Zbtb38Q3LR78 1197 aa9.79□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Aebp2Q9Z248 504 aaKnown RBP9.79□□□□□ -0.84
Smarca2-246ENSMUST00000209085 NrdcQ8BHG1 1161 aa9.78□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Styxl1Q9DAR2 321 aa9.78□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Dnajc5P60904 198 aa9.77□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Scaf1Q5U4C3 1256 aaKnown RBP9.77□□□□□ -0.84
Smarca2-246ENSMUST00000209085 Hdac5Q9Z2V6 1113 aa9.77□□□□□ -0.85
Smarca2-246ENSMUST00000209085 MyclP10166 368 aa9.76□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Fgd1P52734 960 aa9.76□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Rangap1P46061 589 aaKnown RBP9.75□□□□□ -0.85
Smarca2-246ENSMUST00000209085 HomezQ80W88 542 aa9.75□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Irx6Q9ER75 438 aa9.75□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Arid4bA2CG63 1314 aaKnown RBP9.74□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Skida1Q80YR3 822 aa9.73□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Spryd3E9Q9B3 442 aa9.72□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Ccdc9Q8VC31 543 aaKnown RBP9.72□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Ciz1Q8VEH2 845 aa9.72□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Pknox2Q8BG99 474 aa9.71□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Rb1cc1Q9ESK9 1588 aa9.71□□□□□ -0.85
Smarca2-246ENSMUST00000209085 Hsp90b1P08113 802 aaKnown RBP9.7□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Hnrnpul2Q00PI9 745 aaKnown RBP9.7□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Mkrn3Q60764 544 aa9.7□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Chrna2Q91X60 512 aa9.7□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Slc34a2Q9DBP0 697 aa9.7□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Kdm2aP59997 1161 aa9.68□□□□□ -0.86
Smarca2-246ENSMUST00000209085 SafbD3YXK2 937 aaKnown RBP9.68□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Plcd3Q8K2J0 785 aa9.68□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Ythdc1E9Q5K9 736 aaKnown RBP9.66□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Hmgb1P63158 215 aaKnown RBP9.66□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Baz1aO88379 1555 aa9.65□□□□□ -0.86
Smarca2-246ENSMUST00000209085 Npm1Q61937 292 aaKnown RBP9.63□□□□□ -0.87
Smarca2-246ENSMUST00000209085 TonslQ6NZL6 1363 aa9.6□□□□□ -0.87
Smarca2-246ENSMUST00000209085 Upf2A2AT37 1269 aaKnown RBP9.6□□□□□ -0.87
Smarca2-246ENSMUST00000209085 Brpf1B2RRD7 1212 aa9.6□□□□□ -0.87
Smarca2-246ENSMUST00000209085 Gm13695A2AK44 830 aa9.59□□□□□ -0.87
Smarca2-246ENSMUST00000209085 Ccdc136Q3TVA9 1136 aa9.59□□□□□ -0.87
Smarca2-246ENSMUST00000209085 Samd1D3YXK1 519 aa9.59□□□□□ -0.88
Smarca2-246ENSMUST00000209085 ScribQ80U72 1612 aa9.58□□□□□ -0.88
Smarca2-246ENSMUST00000209085 NacadQ5SWP3 1504 aa9.57□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Stra8P70278 393 aa9.57□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Rsf1E9PWW9 1441 aaKnown RBP9.56□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Irx3P81067 507 aa9.55□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Supt16hQ920B9 1047 aa9.55□□□□□ -0.88
Smarca2-246ENSMUST00000209085 DaxxO35613 739 aa9.54□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Ccdc27Q3V036 639 aa9.54□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Gtf3c6Q9D8P7 227 aa9.54□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Znf219Q6IQX8 726 aa9.54□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Gpatch11Q3UFS4 262 aa9.53□□□□□ -0.88
Smarca2-246ENSMUST00000209085 Znf710Q3U288 666 aa9.52□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Smarca2Q6DIC0 1577 aa9.51□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Nolc1E9Q5C9 702 aaKnown RBP9.51□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Ipo4Q8VI75 1082 aa9.51□□□□□ -0.89
Smarca2-246ENSMUST00000209085 TraipQ8VIG6 470 aa9.5□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Ggt6Q6PDE7 497 aa9.49□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Ccdc96Q9CR92 584 aa9.48□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Calr4Q3TQS0 420 aa9.47□□□□□ -0.89
Smarca2-246ENSMUST00000209085 Brd2Q7JJ13 798 aaKnown RBP9.46□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Rimbp2Q80U40 1072 aa9.43□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Riok3Q9DBU3 519 aaKnown RBP9.43□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Noc3lQ8VI84 807 aaKnown RBP9.42□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Washc2Q6PGL7 1334 aa9.42□□□□□ -0.9
Smarca2-246ENSMUST00000209085 1700019A02RikA0A087WPV9 146 aa9.42□□□□□ -0.9
Smarca2-246ENSMUST00000209085 TprnA2AI08 749 aaKnown RBP9.41□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Il27Q8K3I6 234 aa9.4□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Rpap1Q80TE0 1409 aa9.4□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Ncapd3Q6ZQK0 1506 aa9.4□□□□□ -0.9
Smarca2-246ENSMUST00000209085 Hsp90aa1P07901 733 aaKnown RBP9.4□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Hs1bp3Q3TC93 395 aa9.39□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Ap3b1Q9Z1T1 1105 aa9.38□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Ccdc88bQ4QRL3 1481 aa9.38□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Rbm25B2RY56 838 aaKnown RBP9.38□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Myt1lP97500 1187 aa9.38□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Wdr43Q6ZQL4 677 aaKnown RBP9.38□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Crybg2B7ZCC2 1516 aa9.37□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Slc24a1Q91WD8 1130 aa9.36□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Tcf3P15806 651 aa9.35□□□□□ -0.91
Smarca2-246ENSMUST00000209085 VaspP70460 375 aaKnown RBP9.35□□□□□ -0.91
Smarca2-246ENSMUST00000209085 C1qtnf12Q8R2Z0 308 aa9.35□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Golga3P55937 1487 aa9.34□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Irf5P56477 497 aa9.34□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Ppp6r1Q7TSI3 856 aa9.34□□□□□ -0.91
Smarca2-246ENSMUST00000209085 Kdm5bQ80Y84 1544 aa9.33□□□□□ -0.92
Smarca2-246ENSMUST00000209085 Ipo9Q91YE6 1041 aa9.32□□□□□ -0.92
Smarca2-246ENSMUST00000209085 Dhx30Q99PU8 1217 aaKnown RBP9.32□□□□□ -0.92
Smarca2-246ENSMUST00000209085 Rapgef2Q8CHG7 1496 aa9.32□□□□□ -0.92
Smarca2-246ENSMUST00000209085 Zc3h15Q3TIV5 426 aaKnown RBP9.31□□□□□ -0.92
Smarca2-246ENSMUST00000209085 B4galnt3Q6L8S8 986 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms