RNA–Protein interactions for RNA: ENSMUST00000193170.1

Ccdc71-202, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-202ENSMUST00000193170 NclP09405 707 aaKnown RBP13.42□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Rsf1E9PWW9 1441 aaKnown RBP13.4□□□□□ -0.26
Ccdc71-202ENSMUST00000193170 Rangap1P46061 589 aaKnown RBP13.39□□□□□ -0.27
Ccdc71-202ENSMUST00000193170 Nlrp6Q91WS2 869 aa13.37□□□□□ -0.27
Ccdc71-202ENSMUST00000193170 4933416C03RikQ3V063 378 aa13.36□□□□□ -0.27
Ccdc71-202ENSMUST00000193170 NrdcQ8BHG1 1161 aa13.36□□□□□ -0.27
Ccdc71-202ENSMUST00000193170 Smarca2Q6DIC0 1577 aa13.31□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 Gtf3c6Q9D8P7 227 aa13.3□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 Las1lA2BE28 776 aaKnown RBP13.29□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 Fgd1P52734 960 aa13.29□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 Znf692Q3U381 531 aa13.29□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 Ccdc88bQ4QRL3 1481 aa13.28□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 Csrnp3P59055 597 aa13.28□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 1700123L14RikQ3V2K7 440 aa13.27□□□□□ -0.28
Ccdc71-202ENSMUST00000193170 BicraF8VPZ9 1578 aa13.26□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 HomezQ80W88 542 aa13.24□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 Crybg2B7ZCC2 1516 aa13.24□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 Aebp2Q9Z248 504 aaKnown RBP13.23□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 Senp3Q9EP97 568 aaKnown RBP13.23□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 DaxxO35613 739 aa13.22□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 Zbtb38Q3LR78 1197 aa13.21□□□□□ -0.29
Ccdc71-202ENSMUST00000193170 Gpatch11Q3UFS4 262 aa13.19□□□□□ -0.3
Ccdc71-202ENSMUST00000193170 Wdr66E9Q743 1299 aa13.17□□□□□ -0.3
Ccdc71-202ENSMUST00000193170 Anks4bQ8K3X6 423 aa13.15□□□□□ -0.3
Ccdc71-202ENSMUST00000193170 Irx3P81067 507 aa13.14□□□□□ -0.31
Ccdc71-202ENSMUST00000193170 Prm3Q62100 101 aa13.13□□□□□ -0.31
Ccdc71-202ENSMUST00000193170 Cecr2E9Q2Z1 1453 aa13.12□□□□□ -0.31
Ccdc71-202ENSMUST00000193170 Hs1bp3Q3TC93 395 aa13.1□□□□□ -0.31
Ccdc71-202ENSMUST00000193170 Brd2Q7JJ13 798 aaKnown RBP13.07□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Plcd3Q8K2J0 785 aa13.06□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Tmem132aQ922P8 1018 aa13.06□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Hsp90b1P08113 802 aaKnown RBP13.05□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Golga3P55937 1487 aa13.05□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Hs6st3Q9QYK4 470 aa13.05□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Styxl1Q9DAR2 321 aa13.04□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Zfp777B9EKF4 885 aa13.03□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 1700019A02RikA0A087WPV9 146 aa13.02□□□□□ -0.32
Ccdc71-202ENSMUST00000193170 Brd4Q9ESU6 1400 aaKnown RBP13.01□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 Nop58Q6DFW4 536 aaKnown RBP13□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 Synj1Q8CHC4 1574 aa12.99□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 Ppp6r1Q7TSI3 856 aa12.97□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 Ubap1lG3UW59 384 aa12.97□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 Zfp91Q62511 572 aa12.97□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 B4galnt3Q6L8S8 986 aa12.96□□□□□ -0.33
Ccdc71-202ENSMUST00000193170 Ythdc1E9Q5K9 736 aaKnown RBP12.95□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Fam50aQ9WV03 339 aaKnown RBP12.95□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Myt1lP97500 1187 aa12.94□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Rbm25B2RY56 838 aaKnown RBP12.94□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Tmed8Q3UHI4 326 aa12.94□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Fam163aQ8CAA5 168 aa12.93□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 ClspnQ80YR7 1315 aa12.93□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Anp32bQ9EST5 272 aaKnown RBP12.91□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Cdca7Q9D0M2 382 aa12.91□□□□□ -0.34
Ccdc71-202ENSMUST00000193170 Irf5P56477 497 aa12.89□□□□□ -0.35
Ccdc71-202ENSMUST00000193170 Mkrn3Q60764 544 aa12.89□□□□□ -0.35
Ccdc71-202ENSMUST00000193170 Aebp1Q640N1 1128 aa12.89□□□□□ -0.35
Ccdc71-202ENSMUST00000193170 Kdm2aP59997 1161 aa12.86□□□□□ -0.35
Ccdc71-202ENSMUST00000193170 Dnajc5bQ9CQ94 199 aa12.86□□□□□ -0.35
Ccdc71-202ENSMUST00000193170 Plekhg3Q4VAC9 1341 aa12.84□□□□□ -0.35
Ccdc71-202ENSMUST00000193170 TonslQ6NZL6 1363 aa12.83□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 CftrP26361 1476 aa12.83□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Npm1Q61937 292 aaKnown RBP12.82□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 PtmaP26350 111 aa12.82□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Zcwpw1Q6IR42 630 aa12.82□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Pds5bQ4VA53 1446 aaKnown RBP12.81□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Gm13695A2AK44 830 aa12.81□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Cc2d2aQ8CFW7 1633 aa12.8□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Top2bQ64511 1612 aa12.8□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Rbm10Q99KG3 930 aaKnown RBP12.79□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Rapgef2Q8CHG7 1496 aa12.78□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Ifnlr1Q8CGK5 535 aa12.78□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Ppp1r18Q8BQ30 594 aa12.78□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Noc3lQ8VI84 807 aaKnown RBP12.78□□□□□ -0.36
Ccdc71-202ENSMUST00000193170 Hmgb1P63158 215 aaKnown RBP12.77□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Psmd1Q3TXS7 953 aa12.75□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Smarca4Q3TKT4 1613 aaKnown RBP12.75□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Atad2bE9Q166 1460 aaKnown RBP12.75□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 SafbD3YXK2 937 aaKnown RBP12.75□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Ccdc96Q9CR92 584 aa12.75□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Eid3Q3V124 375 aa12.75□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Cep162Q6ZQ06 1403 aa12.73□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Dnajc5P60904 198 aa12.72□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Skida1Q80YR3 822 aa12.72□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Vgll3P85442 326 aa12.72□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Ap3b1Q9Z1T1 1105 aa12.72□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Hnrnpul2Q00PI9 745 aaKnown RBP12.71□□□□□ -0.37
Ccdc71-202ENSMUST00000193170 Riok3Q9DBU3 519 aaKnown RBP12.7□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 ErmnQ5EBJ4 281 aa12.68□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 BbxQ8VBW5 907 aa12.68□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 Sh3bp1P55194 680 aa12.67□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 Spryd3E9Q9B3 442 aa12.67□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 Clip1Q922J3 1391 aa12.66□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 Hdac5Q9Z2V6 1113 aa12.66□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 Brpf1B2RRD7 1212 aa12.65□□□□□ -0.38
Ccdc71-202ENSMUST00000193170 Iqgap2Q3UQ44 1575 aa12.65□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Thoc2B1AZI6 1594 aaKnown RBP12.62□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Trim26Q99PN3 545 aa12.62□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Top2aQ01320 1528 aaKnown RBP12.62□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 Ncapd3Q6ZQK0 1506 aa12.62□□□□□ -0.39
Ccdc71-202ENSMUST00000193170 TraipQ8VIG6 470 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms