RNA–Protein interactions for RNA: ENSMUST00000189150.1

Gm28856-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28856, Length 2,828 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28856-201ENSMUST00000189150 Esf1Q3V1V3 845 aaKnown RBP11□□□□□ -0.65
Gm28856-201ENSMUST00000189150 HrcG5E8J6 738 aa11□□□□□ -0.65
Gm28856-201ENSMUST00000189150 Taok2Q6ZQ29 1240 aa10.99□□□□□ -0.65
Gm28856-201ENSMUST00000189150 MycnP03966 462 aaKnown RBP10.99□□□□□ -0.65
Gm28856-201ENSMUST00000189150 Neurod1Q60867 357 aa10.98□□□□□ -0.65
Gm28856-201ENSMUST00000189150 Ppp6r1Q7TSI3 856 aa10.96□□□□□ -0.65
Gm28856-201ENSMUST00000189150 Jarid2Q62315 1234 aa10.94□□□□□ -0.66
Gm28856-201ENSMUST00000189150 Anks4bQ8K3X6 423 aa10.9□□□□□ -0.66
Gm28856-201ENSMUST00000189150 Brd4Q9ESU6 1400 aaKnown RBP10.9□□□□□ -0.66
Gm28856-201ENSMUST00000189150 Synj1Q8CHC4 1574 aa10.9□□□□□ -0.66
Gm28856-201ENSMUST00000189150 Aplp2Q06335 707 aa10.89□□□□□ -0.67
Gm28856-201ENSMUST00000189150 Supt5hO55201 1082 aaKnown RBP10.87□□□□□ -0.67
Gm28856-201ENSMUST00000189150 CftrP26361 1476 aa10.85□□□□□ -0.67
Gm28856-201ENSMUST00000189150 Slc24a1Q91WD8 1130 aa10.85□□□□□ -0.67
Gm28856-201ENSMUST00000189150 Hnrnpul2Q00PI9 745 aaKnown RBP10.83□□□□□ -0.68
Gm28856-201ENSMUST00000189150 Smarca4Q3TKT4 1613 aaKnown RBP10.83□□□□□ -0.68
Gm28856-201ENSMUST00000189150 UbtfP25976 765 aaKnown RBP10.82□□□□□ -0.68
Gm28856-201ENSMUST00000189150 Hdac5Q9Z2V6 1113 aa10.81□□□□□ -0.68
Gm28856-201ENSMUST00000189150 Zbtb22Q9Z0G7 638 aa10.8□□□□□ -0.68
Gm28856-201ENSMUST00000189150 Ferd3lQ923Z4 168 aa10.79□□□□□ -0.68
Gm28856-201ENSMUST00000189150 Skap1Q3UUV5 355 aa10.78□□□□□ -0.68
Gm28856-201ENSMUST00000189150 Pds5bQ4VA53 1446 aaKnown RBP10.77□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Atad2bE9Q166 1460 aaKnown RBP10.76□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Iqgap2Q3UQ44 1575 aa10.76□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Sra1Q80VJ2 232 aa10.73□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Rsf1E9PWW9 1441 aaKnown RBP10.72□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Bcl11aQ9QYE3 773 aa10.72□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Fam117bQ3U3E2 584 aa10.71□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Cadps2Q8BYR5 1297 aa10.71□□□□□ -0.69
Gm28856-201ENSMUST00000189150 Golga3P55937 1487 aa10.71□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Ccdc88bQ4QRL3 1481 aa10.71□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Slc4a2P13808 1237 aaKnown RBP10.7□□□□□ -0.7
Gm28856-201ENSMUST00000189150 TimelessQ9R1X4 1197 aa10.7□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Cttnbp2B9EJA2 1648 aa10.69□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Pitpnm1O35954 1243 aa10.68□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Dnajc5P60904 198 aa10.68□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Pde4dQ01063 747 aa10.68□□□□□ -0.7
Gm28856-201ENSMUST00000189150 NefmP08553 848 aa10.67□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Repin1Q5U4E2 545 aa10.67□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Il27Q8K3I6 234 aa10.65□□□□□ -0.7
Gm28856-201ENSMUST00000189150 Gm13697A2AK42 830 aa10.64□□□□□ -0.71
Gm28856-201ENSMUST00000189150 Nyap1Q6PFX7 833 aa10.63□□□□□ -0.71
Gm28856-201ENSMUST00000189150 Rsph6aQ8CDR2 708 aa10.63□□□□□ -0.71
Gm28856-201ENSMUST00000189150 Frmpd1A2AKB4 1549 aa10.63□□□□□ -0.71
Gm28856-201ENSMUST00000189150 Zeb1Q64318 1117 aa10.62□□□□□ -0.71
Gm28856-201ENSMUST00000189150 Ercc6F8VPZ5 1481 aa10.59□□□□□ -0.71
Gm28856-201ENSMUST00000189150 Trim35Q8C006 501 aa10.58□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Csrnp3P59055 597 aa10.57□□□□□ -0.72
Gm28856-201ENSMUST00000189150 P3h3Q8CG70 732 aa10.57□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Ubl4bQ9CQ84 188 aa10.57□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Cep164Q5DU05 1446 aa10.56□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Wdr62Q3U3T8 1523 aa10.56□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Cc2d2aQ8CFW7 1633 aa10.56□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Chrm1P12657 460 aa10.55□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Zbtb7bQ64321 544 aa10.55□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Rgl2Q61193 778 aa10.54□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Vsig10D3YX43 558 aa10.53□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Kcnn1Q9EQR3 537 aa10.53□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Pdap1Q3UHX2 181 aaKnown RBP10.53□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Top2bQ64511 1612 aa10.52□□□□□ -0.72
Gm28856-201ENSMUST00000189150 Kif15Q6P9L6 1387 aa10.52□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Rtl5Q5DTT4 599 aa10.52□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Mkrn3Q60764 544 aa10.49□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Noa1Q9JJG9 693 aaKnown RBP10.49□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Amer1Q7TS75 1132 aa10.48□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Myt1lP97500 1187 aa10.48□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Atad2Q8CDM1 1040 aa10.48□□□□□ -0.73
Gm28856-201ENSMUST00000189150 UncxO08934 530 aa10.46□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Thoc2B1AZI6 1594 aaKnown RBP10.46□□□□□ -0.73
Gm28856-201ENSMUST00000189150 Clcn6O35454 870 aa10.45□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Phldb1Q6PDH0 1371 aaKnown RBP10.45□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Fmn1Q05860 1466 aa10.44□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Kank3Q9Z1P7 791 aa10.44□□□□□ -0.74
Gm28856-201ENSMUST00000189150 SnphQ80U23 495 aa10.43□□□□□ -0.74
Gm28856-201ENSMUST00000189150 PygbQ8CI94 843 aaKnown RBP10.43□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Cdk11bP24788 784 aaKnown RBP10.42□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Sall2Q9QX96 1004 aa10.42□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Unc13aQ4KUS2 1712 aa10.4□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Stk3Q9JI10 497 aa10.4□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Prr29B1ARI9 187 aa10.4□□□□□ -0.74
Gm28856-201ENSMUST00000189150 Npm1Q61937 292 aaKnown RBP10.39□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Stk25Q9Z2W1 426 aa10.38□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Cux2P70298 1426 aa10.38□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Spryd3E9Q9B3 442 aa10.37□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Map4k4P97820 1233 aaKnown RBP10.37□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Q8BT18 775 aa10.35□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Tnnt3Q9QZ47 272 aa10.35□□□□□ -0.75
Gm28856-201ENSMUST00000189150 Top2aQ01320 1528 aaKnown RBP10.33□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Pip4p2Q9CZX7 257 aa10.33□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Ubap1lG3UW59 384 aa10.33□□□□□ -0.76
Gm28856-201ENSMUST00000189150 ClspnQ80YR7 1315 aa10.32□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Lamc3Q9R0B6 1581 aa10.32□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Cnksr2Q80YA9 1032 aa10.32□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Stk24Q99KH8 431 aa10.32□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Rapgef2Q8CHG7 1496 aa10.32□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Znf703P0CL69 594 aa10.31□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Nop58Q6DFW4 536 aaKnown RBP10.31□□□□□ -0.76
Gm28856-201ENSMUST00000189150 PtprkP35822 1457 aa10.31□□□□□ -0.76
Gm28856-201ENSMUST00000189150 CrebzfQ91ZR3 358 aa10.29□□□□□ -0.76
Gm28856-201ENSMUST00000189150 Fam135aQ6NS59 1506 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms