RNA–Protein interactions for RNA: ENSMUST00000170391.1

Chd7-206, Transcript of Chromodomain-helicase-DNA-binding protein 7, mousemouse

TSL 5 BASIC

Gene Chd7, Length 3,462 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7-206ENSMUST00000170391 TnnQ80Z71 1560 aa15.35■□□□□ 0.05
Chd7-206ENSMUST00000170391 Stra8P70278 393 aa15.33■□□□□ 0.04
Chd7-206ENSMUST00000170391 Lmod2Q3UHZ5 550 aa15.3■□□□□ 0.04
Chd7-206ENSMUST00000170391 Eif4g1Q6NZJ6 1600 aaKnown RBP15.3■□□□□ 0.04
Chd7-206ENSMUST00000170391 Npm1Q61937 292 aaKnown RBP15.29■□□□□ 0.04
Chd7-206ENSMUST00000170391 Ccdc18Q640L5 1455 aa15.28■□□□□ 0.04
Chd7-206ENSMUST00000170391 Fam50aQ9WV03 339 aaKnown RBP15.28■□□□□ 0.04
Chd7-206ENSMUST00000170391 Arap1Q4LDD4 1452 aa15.28■□□□□ 0.04
Chd7-206ENSMUST00000170391 Lamc3Q9R0B6 1581 aa15.28■□□□□ 0.04
Chd7-206ENSMUST00000170391 Calr4Q3TQS0 420 aa15.27■□□□□ 0.04
Chd7-206ENSMUST00000170391 Hdac5Q9Z2V6 1113 aa15.26■□□□□ 0.03
Chd7-206ENSMUST00000170391 Shroom4Q1W617 1475 aa15.26■□□□□ 0.03
Chd7-206ENSMUST00000170391 Nolc1E9Q5C9 702 aaKnown RBP15.26■□□□□ 0.03
Chd7-206ENSMUST00000170391 Ubl4bQ9CQ84 188 aa15.26■□□□□ 0.03
Chd7-206ENSMUST00000170391 NrkQ9R0G8 1455 aa15.25■□□□□ 0.03
Chd7-206ENSMUST00000170391 Ncapd3Q6ZQK0 1506 aa15.24■□□□□ 0.03
Chd7-206ENSMUST00000170391 Camsap1A2AHC3 1581 aa15.24■□□□□ 0.03
Chd7-206ENSMUST00000170391 BlmO88700 1416 aa15.24■□□□□ 0.03
Chd7-206ENSMUST00000170391 Baz1bQ9Z277 1479 aa15.21■□□□□ 0.03
Chd7-206ENSMUST00000170391 Eif5bQ05D44 1216 aaKnown RBP15.18■□□□□ 0.02
Chd7-206ENSMUST00000170391 Cux2P70298 1426 aa15.17■□□□□ 0.02
Chd7-206ENSMUST00000170391 Ppp4r2Q0VGB7 417 aa15.17■□□□□ 0.02
Chd7-206ENSMUST00000170391 Grin2bQ01097 1482 aa15.17■□□□□ 0.02
Chd7-206ENSMUST00000170391 Arhgef5E9Q7D5 1581 aa15.17■□□□□ 0.02
Chd7-206ENSMUST00000170391 Unc13aQ4KUS2 1712 aa15.17■□□□□ 0.02
Chd7-206ENSMUST00000170391 NclP09405 707 aaKnown RBP15.16■□□□□ 0.02
Chd7-206ENSMUST00000170391 Supt16hQ920B9 1047 aa15.15■□□□□ 0.02
Chd7-206ENSMUST00000170391 Ube2uB1AUC4 352 aa15.12■□□□□ 0.01
Chd7-206ENSMUST00000170391 Map3k1P53349 1493 aa15.12■□□□□ 0.01
Chd7-206ENSMUST00000170391 Phldb1Q6PDH0 1371 aaKnown RBP15.12■□□□□ 0.01
Chd7-206ENSMUST00000170391 Mroh2bQ7M6Y6 1581 aa15.11■□□□□ 0.01
Chd7-206ENSMUST00000170391 Znf710Q3U288 666 aa15.09■□□□□ 0.01
Chd7-206ENSMUST00000170391 AqrQ8CFQ3 1481 aaKnown RBP15.08■□□□□ 0
Chd7-206ENSMUST00000170391 Tiam1Q60610 1591 aa15.07■□□□□ 0
Chd7-206ENSMUST00000170391 Naip1Q9QWK5 1403 aa15.07■□□□□ 0
Chd7-206ENSMUST00000170391 Wdr43Q6ZQL4 677 aaKnown RBP15.06■□□□□ 0
Chd7-206ENSMUST00000170391 Ankrd26Q811D2 1581 aa15.03■□□□□ -0
Chd7-206ENSMUST00000170391 LrpprcQ6PB66 1392 aaKnown RBP15.03■□□□□ -0
Chd7-206ENSMUST00000170391 Plcd4Q8K3R3 807 aa15.02■□□□□ -0
Chd7-206ENSMUST00000170391 Pcf11G3X9Z4 1553 aa15.02■□□□□ -0
Chd7-206ENSMUST00000170391 Carmil1Q6EDY6 1374 aa15.01□□□□□ -0.01
Chd7-206ENSMUST00000170391 Pknox2Q8BG99 474 aa15□□□□□ -0.01
Chd7-206ENSMUST00000170391 Slx4Q6P1D7 1565 aa14.99□□□□□ -0.01
Chd7-206ENSMUST00000170391 Duox2A2AQ99 1517 aa14.98□□□□□ -0.01
Chd7-206ENSMUST00000170391 4933416C03RikQ3V063 378 aa14.97□□□□□ -0.01
Chd7-206ENSMUST00000170391 Cux1P53564 1515 aa14.97□□□□□ -0.01
Chd7-206ENSMUST00000170391 Efcab5A0JP43 1406 aa14.97□□□□□ -0.01
Chd7-206ENSMUST00000170391 Upf2A2AT37 1269 aaKnown RBP14.96□□□□□ -0.02
Chd7-206ENSMUST00000170391 CntlnA2AM05 1397 aa14.95□□□□□ -0.02
Chd7-206ENSMUST00000170391 Aebp1Q640N1 1128 aa14.95□□□□□ -0.02
Chd7-206ENSMUST00000170391 Chic2Q9D9G3 165 aa14.94□□□□□ -0.02
Chd7-206ENSMUST00000170391 PogzQ8BZH4 1409 aaKnown RBP14.94□□□□□ -0.02
Chd7-206ENSMUST00000170391 Fgd1P52734 960 aa14.94□□□□□ -0.02
Chd7-206ENSMUST00000170391 Erich3F6QRE9 1637 aa14.94□□□□□ -0.02
Chd7-206ENSMUST00000170391 Ccdc27Q3V036 639 aa14.94□□□□□ -0.02
Chd7-206ENSMUST00000170391 Dhx29Q6PGC1 1365 aaKnown RBP14.92□□□□□ -0.02
Chd7-206ENSMUST00000170391 Rad54l2Q99NG0 1466 aa14.92□□□□□ -0.02
Chd7-206ENSMUST00000170391 Kdm5bQ80Y84 1544 aa14.91□□□□□ -0.02
Chd7-206ENSMUST00000170391 Hspa5P20029 655 aaKnown RBP14.91□□□□□ -0.02
Chd7-206ENSMUST00000170391 Gtf3c3Q3TMP1 882 aa14.91□□□□□ -0.02
Chd7-206ENSMUST00000170391 Fyco1Q8VDC1 1437 aa14.9□□□□□ -0.02
Chd7-206ENSMUST00000170391 P3h3Q8CG70 732 aa14.9□□□□□ -0.02
Chd7-206ENSMUST00000170391 Pak3Q61036 559 aa14.89□□□□□ -0.03
Chd7-206ENSMUST00000170391 Thoc2B1AZI6 1594 aaKnown RBP14.89□□□□□ -0.03
Chd7-206ENSMUST00000170391 Irx3P81067 507 aa14.86□□□□□ -0.03
Chd7-206ENSMUST00000170391 3425401B19RikD3Z1D3 1412 aa14.85□□□□□ -0.03
Chd7-206ENSMUST00000170391 Lmo7E9PYF4 1699 aaKnown RBP14.85□□□□□ -0.03
Chd7-206ENSMUST00000170391 DaxxO35613 739 aa14.85□□□□□ -0.03
Chd7-206ENSMUST00000170391 Slc4a3P16283 1227 aa14.85□□□□□ -0.03
Chd7-206ENSMUST00000170391 Samd9lQ69Z37 1561 aa14.84□□□□□ -0.03
Chd7-206ENSMUST00000170391 Hsp90aa1P07901 733 aaKnown RBP14.84□□□□□ -0.03
Chd7-206ENSMUST00000170391 SynmQ70IV5 1561 aa14.84□□□□□ -0.03
Chd7-206ENSMUST00000170391 Rpap1Q80TE0 1409 aa14.84□□□□□ -0.03
Chd7-206ENSMUST00000170391 Urb2E9Q7L1 1524 aaKnown RBP14.83□□□□□ -0.03
Chd7-206ENSMUST00000170391 TchhA0A0B4J1F9 1599 aa14.83□□□□□ -0.04
Chd7-206ENSMUST00000170391 Mia2Q91ZV0 1396 aa14.82□□□□□ -0.04
Chd7-206ENSMUST00000170391 Ccer2J3QPU5 274 aa14.81□□□□□ -0.04
Chd7-206ENSMUST00000170391 NrdcQ8BHG1 1161 aa14.78□□□□□ -0.04
Chd7-206ENSMUST00000170391 Ccnb3Q810T2 1396 aa14.78□□□□□ -0.04
Chd7-206ENSMUST00000170391 Ccdc9Q8VC31 543 aaKnown RBP14.77□□□□□ -0.04
Chd7-206ENSMUST00000170391 Fam135aQ6NS59 1506 aa14.77□□□□□ -0.04
Chd7-206ENSMUST00000170391 Fhad1A6PWD2 1420 aa14.77□□□□□ -0.05
Chd7-206ENSMUST00000170391 Kif27Q7M6Z4 1394 aa14.76□□□□□ -0.05
Chd7-206ENSMUST00000170391 Polr1aO35134 1717 aaKnown RBP14.76□□□□□ -0.05
Chd7-206ENSMUST00000170391 Gm7298A0A0N4SVU1 1476 aa14.76□□□□□ -0.05
Chd7-206ENSMUST00000170391 Gm1043A0A140LJC2 1431 aa14.75□□□□□ -0.05
Chd7-206ENSMUST00000170391 Mrs2Q5NCE8 434 aa14.74□□□□□ -0.05
Chd7-206ENSMUST00000170391 Crocc2F6XLV1 1638 aa14.73□□□□□ -0.05
Chd7-206ENSMUST00000170391 EprsQ8CGC7 1512 aaKnown RBP14.73□□□□□ -0.05
Chd7-206ENSMUST00000170391 Sin3aQ60520 1274 aaKnown RBP14.72□□□□□ -0.05
Chd7-206ENSMUST00000170391 Dnajc5bQ9CQ94 199 aa14.72□□□□□ -0.05
Chd7-206ENSMUST00000170391 Vps8Q0P5W1 1427 aa14.72□□□□□ -0.05
Chd7-206ENSMUST00000170391 Washc2Q6PGL7 1334 aa14.71□□□□□ -0.06
Chd7-206ENSMUST00000170391 Naip2Q9QUK4 1447 aa14.7□□□□□ -0.06
Chd7-206ENSMUST00000170391 A2mQ6GQT1 1474 aa14.7□□□□□ -0.06
Chd7-206ENSMUST00000170391 Peg3Q3URU2 1571 aa14.69□□□□□ -0.06
Chd7-206ENSMUST00000170391 Ankrd36D3Z4K0 1415 aa14.68□□□□□ -0.06
Chd7-206ENSMUST00000170391 CadpsQ80TJ1 1355 aa14.68□□□□□ -0.06
Chd7-206ENSMUST00000170391 Kif21aQ9QXL2 1672 aa14.68□□□□□ -0.06
Chd7-206ENSMUST00000170391 Gm13697A2AK42 830 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms