RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Shroom4Q1W617 1475 aa17.65■□□□□ 0.42
Ebf3-203ENSMUST00000168203 NrkQ9R0G8 1455 aa17.65■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Setd5Q5XJV7 1441 aa17.65■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Eif5bQ05D44 1216 aaKnown RBP17.65■□□□□ 0.42
Ebf3-203ENSMUST00000168203 Camsap1A2AHC3 1581 aa17.63■□□□□ 0.41
Ebf3-203ENSMUST00000168203 Eid3Q3V124 375 aa17.62■□□□□ 0.41
Ebf3-203ENSMUST00000168203 Eif4g1Q6NZJ6 1600 aaKnown RBP17.61■□□□□ 0.41
Ebf3-203ENSMUST00000168203 Stra8P70278 393 aa17.6■□□□□ 0.41
Ebf3-203ENSMUST00000168203 Cux2P70298 1426 aa17.59■□□□□ 0.41
Ebf3-203ENSMUST00000168203 Anp32aO35381 247 aa17.57■□□□□ 0.4
Ebf3-203ENSMUST00000168203 Map3k1P53349 1493 aa17.57■□□□□ 0.4
Ebf3-203ENSMUST00000168203 Grin2bQ01097 1482 aa17.56■□□□□ 0.4
Ebf3-203ENSMUST00000168203 Hnrnpul2Q00PI9 745 aaKnown RBP17.54■□□□□ 0.4
Ebf3-203ENSMUST00000168203 NclP09405 707 aaKnown RBP17.53■□□□□ 0.4
Ebf3-203ENSMUST00000168203 Baz1bQ9Z277 1479 aa17.52■□□□□ 0.39
Ebf3-203ENSMUST00000168203 Arap1Q4LDD4 1452 aa17.48■□□□□ 0.39
Ebf3-203ENSMUST00000168203 Unc13aQ4KUS2 1712 aa17.47■□□□□ 0.39
Ebf3-203ENSMUST00000168203 Mroh2bQ7M6Y6 1581 aa17.47■□□□□ 0.39
Ebf3-203ENSMUST00000168203 LrpprcQ6PB66 1392 aaKnown RBP17.46■□□□□ 0.39
Ebf3-203ENSMUST00000168203 BlmO88700 1416 aa17.45■□□□□ 0.38
Ebf3-203ENSMUST00000168203 4933416C03RikQ3V063 378 aa17.44■□□□□ 0.38
Ebf3-203ENSMUST00000168203 Efcab5A0JP43 1406 aa17.43■□□□□ 0.38
Ebf3-203ENSMUST00000168203 Arhgef5E9Q7D5 1581 aa17.43■□□□□ 0.38
Ebf3-203ENSMUST00000168203 Thoc2B1AZI6 1594 aaKnown RBP17.41■□□□□ 0.38
Ebf3-203ENSMUST00000168203 PrkcshO08795 521 aa17.41■□□□□ 0.38
Ebf3-203ENSMUST00000168203 Ncapd3Q6ZQK0 1506 aa17.41■□□□□ 0.38
Ebf3-203ENSMUST00000168203 Carmil1Q6EDY6 1374 aa17.41■□□□□ 0.38
Ebf3-203ENSMUST00000168203 Lmod2Q3UHZ5 550 aa17.38■□□□□ 0.37
Ebf3-203ENSMUST00000168203 Fam50aQ9WV03 339 aaKnown RBP17.38■□□□□ 0.37
Ebf3-203ENSMUST00000168203 AqrQ8CFQ3 1481 aaKnown RBP17.36■□□□□ 0.37
Ebf3-203ENSMUST00000168203 PogzQ8BZH4 1409 aaKnown RBP17.36■□□□□ 0.37
Ebf3-203ENSMUST00000168203 Ifnlr1Q8CGK5 535 aa17.35■□□□□ 0.37
Ebf3-203ENSMUST00000168203 Rtl5Q5DTT4 599 aa17.34■□□□□ 0.37
Ebf3-203ENSMUST00000168203 Duox2A2AQ99 1517 aa17.34■□□□□ 0.37
Ebf3-203ENSMUST00000168203 Tiam1Q60610 1591 aa17.32■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Fam135aQ6NS59 1506 aa17.31■□□□□ 0.36
Ebf3-203ENSMUST00000168203 CntlnA2AM05 1397 aa17.31■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Calr4Q3TQS0 420 aa17.31■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Naip1Q9QWK5 1403 aa17.3■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Ppp4r2Q0VGB7 417 aa17.3■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Dhx29Q6PGC1 1365 aaKnown RBP17.3■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Ankrd26Q811D2 1581 aa17.27■□□□□ 0.36
Ebf3-203ENSMUST00000168203 Fyco1Q8VDC1 1437 aa17.24■□□□□ 0.35
Ebf3-203ENSMUST00000168203 Erich3F6QRE9 1637 aa17.22■□□□□ 0.35
Ebf3-203ENSMUST00000168203 Pcf11G3X9Z4 1553 aa17.22■□□□□ 0.35
Ebf3-203ENSMUST00000168203 Aebp1Q640N1 1128 aa17.21■□□□□ 0.35
Ebf3-203ENSMUST00000168203 Rpap1Q80TE0 1409 aa17.2■□□□□ 0.34
Ebf3-203ENSMUST00000168203 Cux1P53564 1515 aa17.19■□□□□ 0.34
Ebf3-203ENSMUST00000168203 DaxxO35613 739 aa17.18■□□□□ 0.34
Ebf3-203ENSMUST00000168203 SynmQ70IV5 1561 aa17.18■□□□□ 0.34
Ebf3-203ENSMUST00000168203 NrdcQ8BHG1 1161 aa17.18■□□□□ 0.34
Ebf3-203ENSMUST00000168203 Polr1aO35134 1717 aaKnown RBP17.17■□□□□ 0.34
Ebf3-203ENSMUST00000168203 Ccer2J3QPU5 274 aa17.17■□□□□ 0.34
Ebf3-203ENSMUST00000168203 Rad54l2Q99NG0 1466 aa17.15■□□□□ 0.34
Ebf3-203ENSMUST00000168203 Slx4Q6P1D7 1565 aa17.13■□□□□ 0.33
Ebf3-203ENSMUST00000168203 Mia2Q91ZV0 1396 aa17.12■□□□□ 0.33
Ebf3-203ENSMUST00000168203 Mrc2Q64449 1479 aa17.11■□□□□ 0.33
Ebf3-203ENSMUST00000168203 Urb2E9Q7L1 1524 aaKnown RBP17.1■□□□□ 0.33
Ebf3-203ENSMUST00000168203 Samd9lQ69Z37 1561 aa17.1■□□□□ 0.33
Ebf3-203ENSMUST00000168203 Crocc2F6XLV1 1638 aa17.09■□□□□ 0.33
Ebf3-203ENSMUST00000168203 Wdr43Q6ZQL4 677 aaKnown RBP17.08■□□□□ 0.32
Ebf3-203ENSMUST00000168203 Lmo7E9PYF4 1699 aaKnown RBP17.07■□□□□ 0.32
Ebf3-203ENSMUST00000168203 P3h3Q8CG70 732 aa17.07■□□□□ 0.32
Ebf3-203ENSMUST00000168203 TchhA0A0B4J1F9 1599 aa17.06■□□□□ 0.32
Ebf3-203ENSMUST00000168203 EprsQ8CGC7 1512 aaKnown RBP17.03■□□□□ 0.32
Ebf3-203ENSMUST00000168203 Kif27Q7M6Z4 1394 aa17.03■□□□□ 0.32
Ebf3-203ENSMUST00000168203 Kdm5bQ80Y84 1544 aa17.02■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Nolc1E9Q5C9 702 aaKnown RBP17.01■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Fhad1A6PWD2 1420 aa17.01■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Peg3Q3URU2 1571 aa17.01■□□□□ 0.31
Ebf3-203ENSMUST00000168203 CadpsQ80TJ1 1355 aa16.97■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Chic2Q9D9G3 165 aa16.97■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Ccnb3Q810T2 1396 aa16.96■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Gm1043A0A140LJC2 1431 aa16.96■□□□□ 0.31
Ebf3-203ENSMUST00000168203 3425401B19RikD3Z1D3 1412 aa16.96■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Kif21aQ9QXL2 1672 aa16.96■□□□□ 0.31
Ebf3-203ENSMUST00000168203 Gm7298A0A0N4SVU1 1476 aa16.95■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Plb1Q3TTY0 1478 aa16.95■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Supt16hQ920B9 1047 aa16.95■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Vps8Q0P5W1 1427 aa16.95■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Pla2r1Q62028 1487 aa16.94■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Slc4a3P16283 1227 aa16.93■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Grin2aP35436 1464 aa16.92■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Ankrd36D3Z4K0 1415 aa16.92■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Hspa5P20029 655 aaKnown RBP16.9■□□□□ 0.3
Ebf3-203ENSMUST00000168203 Naip2Q9QUK4 1447 aa16.89■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Magi3Q9EQJ9 1476 aa16.88■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Mrs2Q5NCE8 434 aa16.87■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Gpatch8A2A6A1 1505 aa16.87■□□□□ 0.29
Ebf3-203ENSMUST00000168203 UacaQ8CGB3 1411 aa16.87■□□□□ 0.29
Ebf3-203ENSMUST00000168203 NeflP08551 543 aa16.87■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Dnajc5bQ9CQ94 199 aa16.87■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Arhgap27A2AB59 869 aa16.86■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Disp1Q3TDN0 1521 aa16.85■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Ift140E9PY46 1464 aa16.84■□□□□ 0.29
Ebf3-203ENSMUST00000168203 A2mQ6GQT1 1474 aa16.84■□□□□ 0.29
Ebf3-203ENSMUST00000168203 WrnO09053 1401 aa16.83■□□□□ 0.29
Ebf3-203ENSMUST00000168203 Soga1E1U8D0 1418 aa16.83■□□□□ 0.28
Ebf3-203ENSMUST00000168203 ArxO35085 564 aa16.82■□□□□ 0.28
Ebf3-203ENSMUST00000168203 Hdac5Q9Z2V6 1113 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms