RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Frmpd1A2AKB4 1549 aa24.84■■□□□ 1.57
Ckap4-202ENSMUST00000167671 Lmod2Q3UHZ5 550 aa24.83■■□□□ 1.57
Ckap4-202ENSMUST00000167671 Pds5bQ4VA53 1446 aaKnown RBP24.83■■□□□ 1.57
Ckap4-202ENSMUST00000167671 Lamc3Q9R0B6 1581 aa24.81■■□□□ 1.56
Ckap4-202ENSMUST00000167671 Naip1Q9QWK5 1403 aa24.81■■□□□ 1.56
Ckap4-202ENSMUST00000167671 Map3k1P53349 1493 aa24.8■■□□□ 1.56
Ckap4-202ENSMUST00000167671 Camsap1A2AHC3 1581 aa24.76■■□□□ 1.55
Ckap4-202ENSMUST00000167671 TchhA0A0B4J1F9 1599 aa24.76■■□□□ 1.55
Ckap4-202ENSMUST00000167671 Rpap1Q80TE0 1409 aa24.76■■□□□ 1.55
Ckap4-202ENSMUST00000167671 Fam71e1A1L3C1 212 aa24.75■■□□□ 1.55
Ckap4-202ENSMUST00000167671 Wdr62Q3U3T8 1523 aa24.74■■□□□ 1.55
Ckap4-202ENSMUST00000167671 Slx4Q6P1D7 1565 aa24.71■■□□□ 1.55
Ckap4-202ENSMUST00000167671 Ankrd26Q811D2 1581 aa24.71■■□□□ 1.55
Ckap4-202ENSMUST00000167671 Mroh2bQ7M6Y6 1581 aa24.68■■□□□ 1.54
Ckap4-202ENSMUST00000167671 Pcf11G3X9Z4 1553 aa24.68■■□□□ 1.54
Ckap4-202ENSMUST00000167671 Hspa5P20029 655 aaKnown RBP24.65■■□□□ 1.54
Ckap4-202ENSMUST00000167671 Erich3F6QRE9 1637 aa24.65■■□□□ 1.54
Ckap4-202ENSMUST00000167671 Grin2bQ01097 1482 aa24.65■■□□□ 1.54
Ckap4-202ENSMUST00000167671 Znf710Q3U288 666 aa24.62■■□□□ 1.53
Ckap4-202ENSMUST00000167671 Stra8P70278 393 aa24.57■■□□□ 1.52
Ckap4-202ENSMUST00000167671 Unc13aQ4KUS2 1712 aa24.56■■□□□ 1.52
Ckap4-202ENSMUST00000167671 3425401B19RikD3Z1D3 1412 aa24.56■■□□□ 1.52
Ckap4-202ENSMUST00000167671 Ercc6F8VPZ5 1481 aa24.51■■□□□ 1.51
Ckap4-202ENSMUST00000167671 UacaQ8CGB3 1411 aa24.51■■□□□ 1.51
Ckap4-202ENSMUST00000167671 Ube2uB1AUC4 352 aa24.49■■□□□ 1.51
Ckap4-202ENSMUST00000167671 CntlnA2AM05 1397 aa24.49■■□□□ 1.51
Ckap4-202ENSMUST00000167671 Cux1P53564 1515 aa24.49■■□□□ 1.51
Ckap4-202ENSMUST00000167671 Gm13697A2AK42 830 aa24.48■■□□□ 1.51
Ckap4-202ENSMUST00000167671 Slc24a1Q91WD8 1130 aa24.48■■□□□ 1.51
Ckap4-202ENSMUST00000167671 Lmo7E9PYF4 1699 aaKnown RBP24.47■■□□□ 1.51
Ckap4-202ENSMUST00000167671 Dhx29Q6PGC1 1365 aaKnown RBP24.45■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Fhad1A6PWD2 1420 aa24.44■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Sin3aQ60520 1274 aaKnown RBP24.44■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Fyco1Q8VDC1 1437 aa24.43■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Ccer2J3QPU5 274 aa24.42■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Mia2Q91ZV0 1396 aa24.42■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Ankrd36D3Z4K0 1415 aa24.41■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Carmil1Q6EDY6 1374 aa24.41■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Anp32aO35381 247 aa24.4■■□□□ 1.5
Ckap4-202ENSMUST00000167671 Npm1Q61937 292 aaKnown RBP24.37■■□□□ 1.49
Ckap4-202ENSMUST00000167671 Calr4Q3TQS0 420 aa24.36■■□□□ 1.49
Ckap4-202ENSMUST00000167671 Vps8Q0P5W1 1427 aa24.35■■□□□ 1.49
Ckap4-202ENSMUST00000167671 Chic2Q9D9G3 165 aa24.35■■□□□ 1.49
Ckap4-202ENSMUST00000167671 Aebp1Q640N1 1128 aa24.33■■□□□ 1.49
Ckap4-202ENSMUST00000167671 Cux2P70298 1426 aa24.32■■□□□ 1.48
Ckap4-202ENSMUST00000167671 Naip2Q9QUK4 1447 aa24.31■■□□□ 1.48
Ckap4-202ENSMUST00000167671 Urb2E9Q7L1 1524 aaKnown RBP24.3■■□□□ 1.48
Ckap4-202ENSMUST00000167671 Gm7298A0A0N4SVU1 1476 aa24.29■■□□□ 1.48
Ckap4-202ENSMUST00000167671 Nolc1E9Q5C9 702 aaKnown RBP24.28■■□□□ 1.48
Ckap4-202ENSMUST00000167671 Efcab5A0JP43 1406 aa24.27■■□□□ 1.48
Ckap4-202ENSMUST00000167671 Smg6P61406 1418 aaKnown RBP24.26■■□□□ 1.47
Ckap4-202ENSMUST00000167671 Peg3Q3URU2 1571 aa24.25■■□□□ 1.47
Ckap4-202ENSMUST00000167671 Gm1043A0A140LJC2 1431 aa24.25■■□□□ 1.47
Ckap4-202ENSMUST00000167671 A2mQ6GQT1 1474 aa24.22■■□□□ 1.47
Ckap4-202ENSMUST00000167671 Crocc2F6XLV1 1638 aa24.22■■□□□ 1.47
Ckap4-202ENSMUST00000167671 Ubl4bQ9CQ84 188 aa24.21■■□□□ 1.47
Ckap4-202ENSMUST00000167671 LrpprcQ6PB66 1392 aaKnown RBP24.2■■□□□ 1.47
Ckap4-202ENSMUST00000167671 Duox2A2AQ99 1517 aa24.2■■□□□ 1.47
Ckap4-202ENSMUST00000167671 Eif5bQ05D44 1216 aaKnown RBP24.19■■□□□ 1.46
Ckap4-202ENSMUST00000167671 Naip5Q9R016 1403 aa24.19■■□□□ 1.46
Ckap4-202ENSMUST00000167671 PogzQ8BZH4 1409 aaKnown RBP24.15■■□□□ 1.46
Ckap4-202ENSMUST00000167671 Ccnb3Q810T2 1396 aa24.15■■□□□ 1.46
Ckap4-202ENSMUST00000167671 Ncoa2Q61026 1462 aa24.12■■□□□ 1.45
Ckap4-202ENSMUST00000167671 Camsap2Q8C1B1 1461 aa24.12■■□□□ 1.45
Ckap4-202ENSMUST00000167671 Dennd4bQ3U1Y4 1499 aa24.12■■□□□ 1.45
Ckap4-202ENSMUST00000167671 Phldb1Q6PDH0 1371 aaKnown RBP24.12■■□□□ 1.45
Ckap4-202ENSMUST00000167671 SynmQ70IV5 1561 aa24.1■■□□□ 1.45
Ckap4-202ENSMUST00000167671 Rad54l2Q99NG0 1466 aa24.08■■□□□ 1.45
Ckap4-202ENSMUST00000167671 Mrs2Q5NCE8 434 aa24.06■■□□□ 1.44
Ckap4-202ENSMUST00000167671 Samd9lQ69Z37 1561 aa24.06■■□□□ 1.44
Ckap4-202ENSMUST00000167671 Mphosph9A6H5Y1 991 aa24.05■■□□□ 1.44
Ckap4-202ENSMUST00000167671 Ppp4r2Q0VGB7 417 aa24.04■■□□□ 1.44
Ckap4-202ENSMUST00000167671 Cul7Q8VE73 1689 aa24.04■■□□□ 1.44
Ckap4-202ENSMUST00000167671 Polr1aO35134 1717 aaKnown RBP24.02■■□□□ 1.44
Ckap4-202ENSMUST00000167671 Supt16hQ920B9 1047 aa24.01■■□□□ 1.43
Ckap4-202ENSMUST00000167671 P3h3Q8CG70 732 aa23.99■■□□□ 1.43
Ckap4-202ENSMUST00000167671 Bcl11aQ9QYE3 773 aa23.99■■□□□ 1.43
Ckap4-202ENSMUST00000167671 DiexfQ8BTT6 772 aaKnown RBP23.98■■□□□ 1.43
Ckap4-202ENSMUST00000167671 Wwc2Q6NXJ0 1187 aa23.98■■□□□ 1.43
Ckap4-202ENSMUST00000167671 Wdr43Q6ZQL4 677 aaKnown RBP23.95■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Washc2Q6PGL7 1334 aa23.93■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Pprc1Q6NZN1 1644 aa23.93■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Slc4a2P13808 1237 aaKnown RBP23.93■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Kif27Q7M6Z4 1394 aa23.93■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Zfp644E9QA22 1323 aa23.92■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Lmtk2Q3TYD6 1471 aa23.91■■□□□ 1.42
Ckap4-202ENSMUST00000167671 NrdcQ8BHG1 1161 aa23.91■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Thoc2B1AZI6 1594 aaKnown RBP23.91■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Cabp1Q9JLK7 227 aa23.91■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Exoc6Q8R313 802 aa23.9■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Usp47Q8BY87 1376 aa23.89■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Pkd2O35245 966 aa23.89■■□□□ 1.42
Ckap4-202ENSMUST00000167671 Gpatch8A2A6A1 1505 aa23.89■■□□□ 1.41
Ckap4-202ENSMUST00000167671 EprsQ8CGC7 1512 aaKnown RBP23.89■■□□□ 1.41
Ckap4-202ENSMUST00000167671 NexmifQ5DTT1 1515 aa23.88■■□□□ 1.41
Ckap4-202ENSMUST00000167671 Fhod3Q76LL6 1578 aa23.87■■□□□ 1.41
Ckap4-202ENSMUST00000167671 Rtl5Q5DTT4 599 aa23.86■■□□□ 1.41
Ckap4-202ENSMUST00000167671 Ncoa1P70365 1447 aa23.85■■□□□ 1.41
Ckap4-202ENSMUST00000167671 Pelp1Q9DBD5 1123 aaKnown RBP23.84■■□□□ 1.41
Ckap4-202ENSMUST00000167671 BC005561E9Q5E2 1589 aa23.84■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 113.1 ms