RNA–Protein interactions for RNA: ENSMUST00000167327.1

Actn1-202, Transcript of Alpha-actinin-1, mousemouse

TSL 1 (best) BASIC

Gene Actn1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actn1-202ENSMUST00000167327 Ncapd3Q6ZQK0 1506 aa14.59□□□□□ -0.07
Actn1-202ENSMUST00000167327 AqrQ8CFQ3 1481 aaKnown RBP14.58□□□□□ -0.08
Actn1-202ENSMUST00000167327 Ifnlr1Q8CGK5 535 aa14.58□□□□□ -0.08
Actn1-202ENSMUST00000167327 Ap3b1Q9Z1T1 1105 aa14.57□□□□□ -0.08
Actn1-202ENSMUST00000167327 Erich3F6QRE9 1637 aa14.56□□□□□ -0.08
Actn1-202ENSMUST00000167327 Ankrd26Q811D2 1581 aa14.55□□□□□ -0.08
Actn1-202ENSMUST00000167327 LrpprcQ6PB66 1392 aaKnown RBP14.55□□□□□ -0.08
Actn1-202ENSMUST00000167327 Efcab5A0JP43 1406 aa14.55□□□□□ -0.08
Actn1-202ENSMUST00000167327 PogzQ8BZH4 1409 aaKnown RBP14.53□□□□□ -0.08
Actn1-202ENSMUST00000167327 Tiam1Q60610 1591 aa14.53□□□□□ -0.08
Actn1-202ENSMUST00000167327 Duox2A2AQ99 1517 aa14.51□□□□□ -0.09
Actn1-202ENSMUST00000167327 Carmil1Q6EDY6 1374 aa14.49□□□□□ -0.09
Actn1-202ENSMUST00000167327 Pcf11G3X9Z4 1553 aa14.48□□□□□ -0.09
Actn1-202ENSMUST00000167327 Naip1Q9QWK5 1403 aa14.47□□□□□ -0.09
Actn1-202ENSMUST00000167327 Cux1P53564 1515 aa14.45□□□□□ -0.1
Actn1-202ENSMUST00000167327 Lmo7E9PYF4 1699 aaKnown RBP14.44□□□□□ -0.1
Actn1-202ENSMUST00000167327 Samd9lQ69Z37 1561 aa14.44□□□□□ -0.1
Actn1-202ENSMUST00000167327 Slx4Q6P1D7 1565 aa14.43□□□□□ -0.1
Actn1-202ENSMUST00000167327 SynmQ70IV5 1561 aa14.43□□□□□ -0.1
Actn1-202ENSMUST00000167327 Dhx29Q6PGC1 1365 aaKnown RBP14.43□□□□□ -0.1
Actn1-202ENSMUST00000167327 TonslQ6NZL6 1363 aa14.42□□□□□ -0.1
Actn1-202ENSMUST00000167327 BlmO88700 1416 aa14.42□□□□□ -0.1
Actn1-202ENSMUST00000167327 Fam71e1A1L3C1 212 aa14.42□□□□□ -0.1
Actn1-202ENSMUST00000167327 Wdr66E9Q743 1299 aa14.39□□□□□ -0.11
Actn1-202ENSMUST00000167327 Urb2E9Q7L1 1524 aaKnown RBP14.38□□□□□ -0.11
Actn1-202ENSMUST00000167327 Kdm5bQ80Y84 1544 aa14.38□□□□□ -0.11
Actn1-202ENSMUST00000167327 TchhA0A0B4J1F9 1599 aa14.38□□□□□ -0.11
Actn1-202ENSMUST00000167327 Aebp2Q9Z248 504 aaKnown RBP14.38□□□□□ -0.11
Actn1-202ENSMUST00000167327 CntlnA2AM05 1397 aa14.37□□□□□ -0.11
Actn1-202ENSMUST00000167327 Fyco1Q8VDC1 1437 aa14.37□□□□□ -0.11
Actn1-202ENSMUST00000167327 Crocc2F6XLV1 1638 aa14.36□□□□□ -0.11
Actn1-202ENSMUST00000167327 Polr1aO35134 1717 aaKnown RBP14.35□□□□□ -0.11
Actn1-202ENSMUST00000167327 Peg3Q3URU2 1571 aa14.35□□□□□ -0.11
Actn1-202ENSMUST00000167327 Rad54l2Q99NG0 1466 aa14.35□□□□□ -0.11
Actn1-202ENSMUST00000167327 Kif21aQ9QXL2 1672 aa14.35□□□□□ -0.11
Actn1-202ENSMUST00000167327 Mrc2Q64449 1479 aa14.34□□□□□ -0.11
Actn1-202ENSMUST00000167327 Cdk11bP24788 784 aaKnown RBP14.34□□□□□ -0.11
Actn1-202ENSMUST00000167327 Dnajc5bQ9CQ94 199 aa14.33□□□□□ -0.12
Actn1-202ENSMUST00000167327 ClspnQ80YR7 1315 aa14.31□□□□□ -0.12
Actn1-202ENSMUST00000167327 Lmod2Q3UHZ5 550 aa14.3□□□□□ -0.12
Actn1-202ENSMUST00000167327 Rpap1Q80TE0 1409 aa14.3□□□□□ -0.12
Actn1-202ENSMUST00000167327 Nop58Q6DFW4 536 aaKnown RBP14.27□□□□□ -0.12
Actn1-202ENSMUST00000167327 Aebp1Q640N1 1128 aa14.27□□□□□ -0.13
Actn1-202ENSMUST00000167327 Pla2r1Q62028 1487 aa14.26□□□□□ -0.13
Actn1-202ENSMUST00000167327 EprsQ8CGC7 1512 aaKnown RBP14.25□□□□□ -0.13
Actn1-202ENSMUST00000167327 Eid3Q3V124 375 aa14.24□□□□□ -0.13
Actn1-202ENSMUST00000167327 Gm1043A0A140LJC2 1431 aa14.24□□□□□ -0.13
Actn1-202ENSMUST00000167327 3425401B19RikD3Z1D3 1412 aa14.24□□□□□ -0.13
Actn1-202ENSMUST00000167327 Mapk8ip2Q9ERE9 830 aa14.23□□□□□ -0.13
Actn1-202ENSMUST00000167327 Fam50aQ9WV03 339 aaKnown RBP14.23□□□□□ -0.13
Actn1-202ENSMUST00000167327 Magi3Q9EQJ9 1476 aa14.23□□□□□ -0.13
Actn1-202ENSMUST00000167327 Abca5Q8K448 1642 aa14.2□□□□□ -0.14
Actn1-202ENSMUST00000167327 Grin2aP35436 1464 aa14.2□□□□□ -0.14
Actn1-202ENSMUST00000167327 Plb1Q3TTY0 1478 aa14.2□□□□□ -0.14
Actn1-202ENSMUST00000167327 CadpsQ80TJ1 1355 aa14.18□□□□□ -0.14
Actn1-202ENSMUST00000167327 Gm7298A0A0N4SVU1 1476 aa14.18□□□□□ -0.14
Actn1-202ENSMUST00000167327 Ppargc1bQ8VHJ7 1014 aa14.17□□□□□ -0.14
Actn1-202ENSMUST00000167327 Fhad1A6PWD2 1420 aa14.16□□□□□ -0.14
Actn1-202ENSMUST00000167327 Mia2Q91ZV0 1396 aa14.16□□□□□ -0.14
Actn1-202ENSMUST00000167327 Ube2uB1AUC4 352 aa14.16□□□□□ -0.14
Actn1-202ENSMUST00000167327 Gpatch8A2A6A1 1505 aa14.15□□□□□ -0.14
Actn1-202ENSMUST00000167327 Disp1Q3TDN0 1521 aa14.15□□□□□ -0.14
Actn1-202ENSMUST00000167327 Adamts12Q811B3 1600 aa14.14□□□□□ -0.15
Actn1-202ENSMUST00000167327 WizO88286 1684 aaKnown RBP14.14□□□□□ -0.15
Actn1-202ENSMUST00000167327 Vps8Q0P5W1 1427 aa14.13□□□□□ -0.15
Actn1-202ENSMUST00000167327 SafbD3YXK2 937 aaKnown RBP14.12□□□□□ -0.15
Actn1-202ENSMUST00000167327 Naip2Q9QUK4 1447 aa14.12□□□□□ -0.15
Actn1-202ENSMUST00000167327 CatipB9EKE5 520 aa14.11□□□□□ -0.15
Actn1-202ENSMUST00000167327 Kif27Q7M6Z4 1394 aa14.11□□□□□ -0.15
Actn1-202ENSMUST00000167327 Lmtk2Q3TYD6 1471 aa14.11□□□□□ -0.15
Actn1-202ENSMUST00000167327 Ccnb3Q810T2 1396 aa14.1□□□□□ -0.15
Actn1-202ENSMUST00000167327 A2mQ6GQT1 1474 aa14.09□□□□□ -0.15
Actn1-202ENSMUST00000167327 Hdac5Q9Z2V6 1113 aa14.09□□□□□ -0.15
Actn1-202ENSMUST00000167327 Soga1E1U8D0 1418 aa14.09□□□□□ -0.15
Actn1-202ENSMUST00000167327 Ccer2J3QPU5 274 aa14.08□□□□□ -0.15
Actn1-202ENSMUST00000167327 Ankrd36D3Z4K0 1415 aa14.08□□□□□ -0.16
Actn1-202ENSMUST00000167327 Ift140E9PY46 1464 aa14.07□□□□□ -0.16
Actn1-202ENSMUST00000167327 PxdnQ3UQ28 1475 aa14.07□□□□□ -0.16
Actn1-202ENSMUST00000167327 Pbrm1Q8BSQ9 1634 aaKnown RBP14.07□□□□□ -0.16
Actn1-202ENSMUST00000167327 NexmifQ5DTT1 1515 aa14.06□□□□□ -0.16
Actn1-202ENSMUST00000167327 Gcc2Q8CHG3 1679 aa14.06□□□□□ -0.16
Actn1-202ENSMUST00000167327 Abca16E9PWJ7 1678 aa14.05□□□□□ -0.16
Actn1-202ENSMUST00000167327 Plppr3Q7TPB0 716 aa14.05□□□□□ -0.16
Actn1-202ENSMUST00000167327 Setd1bQ8CFT2 1985 aa14.05□□□□□ -0.16
Actn1-202ENSMUST00000167327 BC005561E9Q5E2 1589 aa14.05□□□□□ -0.16
Actn1-202ENSMUST00000167327 Nup160Q9Z0W3 1402 aaKnown RBP14.05□□□□□ -0.16
Actn1-202ENSMUST00000167327 Ttbk1Q6PCN3 1308 aa14.03□□□□□ -0.16
Actn1-202ENSMUST00000167327 UacaQ8CGB3 1411 aa14.02□□□□□ -0.17
Actn1-202ENSMUST00000167327 WrnO09053 1401 aa14□□□□□ -0.17
Actn1-202ENSMUST00000167327 Chic2Q9D9G3 165 aa13.99□□□□□ -0.17
Actn1-202ENSMUST00000167327 Hnrnpul2Q00PI9 745 aaKnown RBP13.98□□□□□ -0.17
Actn1-202ENSMUST00000167327 Pknox2Q8BG99 474 aa13.98□□□□□ -0.17
Actn1-202ENSMUST00000167327 Dennd4bQ3U1Y4 1499 aa13.98□□□□□ -0.17
Actn1-202ENSMUST00000167327 Lrriq1Q0P5X1 1673 aa13.98□□□□□ -0.17
Actn1-202ENSMUST00000167327 Hspa5P20029 655 aaKnown RBP13.98□□□□□ -0.17
Actn1-202ENSMUST00000167327 NclP09405 707 aaKnown RBP13.97□□□□□ -0.17
Actn1-202ENSMUST00000167327 Fgd1P52734 960 aa13.97□□□□□ -0.17
Actn1-202ENSMUST00000167327 Rapgef6Q5NCJ1 1609 aa13.96□□□□□ -0.17
Actn1-202ENSMUST00000167327 Mug1P28665 1476 aa13.95□□□□□ -0.18
Actn1-202ENSMUST00000167327 Cc2d2bA0A286YDU8 1405 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms