RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 BlmO88700 1416 aa8.75□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Wdr62Q3U3T8 1523 aa8.74□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Top2bQ64511 1612 aa8.74□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Frmpd1A2AKB4 1549 aa8.74□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Top2aQ01320 1528 aaKnown RBP8.73□□□□□ -1.01
Ube4a-201ENSMUST00000117506 LrpprcQ6PB66 1392 aaKnown RBP8.73□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Hsp90aa1P07901 733 aaKnown RBP8.73□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Carmil1Q6EDY6 1374 aa8.72□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Rpap1Q80TE0 1409 aa8.72□□□□□ -1.01
Ube4a-201ENSMUST00000117506 NrkQ9R0G8 1455 aa8.69□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Efcab5A0JP43 1406 aa8.69□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Cc2d2aQ8CFW7 1633 aa8.68□□□□□ -1.02
Ube4a-201ENSMUST00000117506 CntlnA2AM05 1397 aa8.67□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Dnajc5bQ9CQ94 199 aa8.67□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Shroom4Q1W617 1475 aa8.67□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Nlrp6Q91WS2 869 aa8.66□□□□□ -1.02
Ube4a-201ENSMUST00000117506 ClspnQ80YR7 1315 aa8.66□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Lamc3Q9R0B6 1581 aa8.66□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Pabpn1Q8CCS6 302 aaKnown RBP8.66□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Dhx29Q6PGC1 1365 aaKnown RBP8.66□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Clstn2Q9ER65 966 aa8.66□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Mrc2Q64449 1479 aa8.65□□□□□ -1.02
Ube4a-201ENSMUST00000117506 Mia2Q91ZV0 1396 aa8.65□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Map3k1P53349 1493 aa8.65□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Ifnlr1Q8CGK5 535 aa8.63□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Polr1aO35134 1717 aaKnown RBP8.63□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Fyco1Q8VDC1 1437 aa8.62□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Dhx57Q6P5D3 1388 aaKnown RBP8.6□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Arhgap27A2AB59 869 aa8.6□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Kif27Q7M6Z4 1394 aa8.6□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Supt5hO55201 1082 aaKnown RBP8.6□□□□□ -1.03
Ube4a-201ENSMUST00000117506 Grin2bQ01097 1482 aa8.6□□□□□ -1.03
Ube4a-201ENSMUST00000117506 PogzQ8BZH4 1409 aaKnown RBP8.58□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Aebp1Q640N1 1128 aa8.58□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Camsap1A2AHC3 1581 aa8.58□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Trim44Q9QXA7 346 aa8.57□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Aplp2Q06335 707 aa8.57□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Duox2A2AQ99 1517 aa8.56□□□□□ -1.04
Ube4a-201ENSMUST00000117506 AqrQ8CFQ3 1481 aaKnown RBP8.55□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Arhgap35Q91YM2 1499 aa8.55□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Adam1bQ8R534 806 aa8.55□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Fkbp15Q6P9Q6 1216 aaKnown RBP8.55□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Lmod3E9QA62 571 aa8.54□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Mtus2Q3UHD3 1353 aa8.54□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Plppr3Q7TPB0 716 aa8.54□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Fam135aQ6NS59 1506 aa8.53□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Thoc2B1AZI6 1594 aaKnown RBP8.53□□□□□ -1.04
Ube4a-201ENSMUST00000117506 TnnQ80Z71 1560 aa8.53□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Ppp1r18Q8BQ30 594 aa8.53□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Cux1P53564 1515 aa8.53□□□□□ -1.04
Ube4a-201ENSMUST00000117506 Mroh2bQ7M6Y6 1581 aa8.52□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Ift140E9PY46 1464 aa8.52□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Gm13697A2AK42 830 aa8.51□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Polr3glQ8R0C0 218 aa8.51□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Hnrnpul2Q00PI9 745 aaKnown RBP8.5□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Anks4bQ8K3X6 423 aa8.5□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Ncoa2Q61026 1462 aa8.5□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Chic2Q9D9G3 165 aa8.49□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Cc2d2bA0A286YDU8 1405 aa8.48□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Urb2E9Q7L1 1524 aaKnown RBP8.47□□□□□ -1.05
Ube4a-201ENSMUST00000117506 DekQ7TNV0 380 aaKnown RBP8.47□□□□□ -1.05
Ube4a-201ENSMUST00000117506 UacaQ8CGB3 1411 aa8.47□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Crocc2F6XLV1 1638 aa8.47□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Safb2Q80YR5 991 aaKnown RBP8.46□□□□□ -1.05
Ube4a-201ENSMUST00000117506 Eid3Q3V124 375 aa8.46□□□□□ -1.06
Ube4a-201ENSMUST00000117506 AknaQ80VW7 1404 aa8.45□□□□□ -1.06
Ube4a-201ENSMUST00000117506 ArxO35085 564 aa8.45□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Calr4Q3TQS0 420 aa8.45□□□□□ -1.06
Ube4a-201ENSMUST00000117506 SynmQ70IV5 1561 aa8.44□□□□□ -1.06
Ube4a-201ENSMUST00000117506 PtmaP26350 111 aa8.44□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Htatsf1Q8BGC0 757 aa8.43□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Ppargc1bQ8VHJ7 1014 aa8.43□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Plekhh2Q8C115 1491 aa8.43□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Arhgef5E9Q7D5 1581 aa8.42□□□□□ -1.06
Ube4a-201ENSMUST00000117506 PtprkP35822 1457 aa8.42□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Rad54l2Q99NG0 1466 aa8.42□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Tnnt2P50752 301 aa8.42□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Zbtb7cQ8VCZ7 619 aa8.42□□□□□ -1.06
Ube4a-201ENSMUST00000117506 WrnO09053 1401 aa8.41□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Ppp4r2Q0VGB7 417 aa8.41□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Wdr43Q6ZQL4 677 aaKnown RBP8.41□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Gm7298A0A0N4SVU1 1476 aa8.41□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Ccnb3Q810T2 1396 aa8.4□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Atp1b4Q99ME6 356 aa8.4□□□□□ -1.06
Ube4a-201ENSMUST00000117506 EprsQ8CGC7 1512 aaKnown RBP8.4□□□□□ -1.06
Ube4a-201ENSMUST00000117506 Erich6D3Z6S9 713 aa8.4□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Plb1Q3TTY0 1478 aa8.4□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Naip1Q9QWK5 1403 aa8.39□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Cwc22Q8C5N3 908 aaKnown RBP8.39□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Calcoco2A2A6M5 331 aa8.39□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Tiam1Q60610 1591 aa8.39□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Fgd6Q69ZL1 1399 aa8.38□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Fgd1P52734 960 aa8.38□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Jph4Q80WT0 628 aa8.38□□□□□ -1.07
Ube4a-201ENSMUST00000117506 TchhA0A0B4J1F9 1599 aa8.38□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Arap1Q4LDD4 1452 aa8.38□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Fhad1A6PWD2 1420 aa8.37□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Hsp90ab1P11499 724 aaKnown RBP8.37□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Sall2Q9QX96 1004 aa8.37□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Gm13695A2AK44 830 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms