RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 TonslQ6NZL6 1363 aa35,57■■■■□ 3,29
Ubp1-203ENSMUST00000116492 Pcf11G3X9Z4 1553 aa35,53■■■■□ 3,28
Ubp1-203ENSMUST00000116492 Lmo7E9PYF4 1699 aaKnown RBP35,49■■■■□ 3,27
Ubp1-203ENSMUST00000116492 Kdm5bQ80Y84 1544 aa35,48■■■■□ 3,27
Ubp1-203ENSMUST00000116492 TchhA0A0B4J1F9 1599 aa35,47■■■■□ 3,27
Ubp1-203ENSMUST00000116492 Aebp2Q9Z248 504 aaKnown RBP35,46■■■■□ 3,27
Ubp1-203ENSMUST00000116492 BlmO88700 1416 aa35,45■■■■□ 3,27
Ubp1-203ENSMUST00000116492 Cux1P53564 1515 aa35,43■■■■□ 3,26
Ubp1-203ENSMUST00000116492 Wdr66E9Q743 1299 aa35,42■■■■□ 3,26
Ubp1-203ENSMUST00000116492 Slx4Q6P1D7 1565 aa35,41■■■■□ 3,26
Ubp1-203ENSMUST00000116492 CntlnA2AM05 1397 aa35,41■■■■□ 3,26
Ubp1-203ENSMUST00000116492 ClspnQ80YR7 1315 aa35,4■■■■□ 3,26
Ubp1-203ENSMUST00000116492 SynmQ70IV5 1561 aa35,39■■■■□ 3,26
Ubp1-203ENSMUST00000116492 Samd9lQ69Z37 1561 aa35,34■■■■□ 3,25
Ubp1-203ENSMUST00000116492 Urb2E9Q7L1 1524 aaKnown RBP35,33■■■■□ 3,25
Ubp1-203ENSMUST00000116492 Dhx29Q6PGC1 1365 aaKnown RBP35,33■■■■□ 3,25
Ubp1-203ENSMUST00000116492 Neurod1Q60867 357 aa35,32■■■■□ 3,24
Ubp1-203ENSMUST00000116492 Peg3Q3URU2 1571 aa35,31■■■■□ 3,24
Ubp1-203ENSMUST00000116492 Fyco1Q8VDC1 1437 aa35,31■■■■□ 3,24
Ubp1-203ENSMUST00000116492 Polr1aO35134 1717 aaKnown RBP35,3■■■■□ 3,24
Ubp1-203ENSMUST00000116492 Rpap1Q80TE0 1409 aa35,24■■■■□ 3,23
Ubp1-203ENSMUST00000116492 Crocc2F6XLV1 1638 aa35,17■■■■□ 3,22
Ubp1-203ENSMUST00000116492 Rad54l2Q99NG0 1466 aa35,11■■■■□ 3,21
Ubp1-203ENSMUST00000116492 Aebp1Q640N1 1128 aa35,08■■■■□ 3,21
Ubp1-203ENSMUST00000116492 Mrc2Q64449 1479 aa35,07■■■■□ 3,2
Ubp1-203ENSMUST00000116492 Kif21aQ9QXL2 1672 aa35,06■■■■□ 3,2
Ubp1-203ENSMUST00000116492 Lmod2Q3UHZ5 550 aa35,03■■■■□ 3,2
Ubp1-203ENSMUST00000116492 3425401B19RikD3Z1D3 1412 aa35,02■■■■□ 3,2
Ubp1-203ENSMUST00000116492 Gm1043A0A140LJC2 1431 aa35■■■■□ 3,19
Ubp1-203ENSMUST00000116492 EprsQ8CGC7 1512 aaKnown RBP34,96■■■■□ 3,19
Ubp1-203ENSMUST00000116492 Eid3Q3V124 375 aa34,96■■■■□ 3,19
Ubp1-203ENSMUST00000116492 Pla2r1Q62028 1487 aa34,95■■■■□ 3,18
Ubp1-203ENSMUST00000116492 Mia2Q91ZV0 1396 aa34,92■■■■□ 3,18
Ubp1-203ENSMUST00000116492 Fhad1A6PWD2 1420 aa34,92■■■■□ 3,18
Ubp1-203ENSMUST00000116492 Fam50aQ9WV03 339 aaKnown RBP34,9■■■■□ 3,18
Ubp1-203ENSMUST00000116492 Magi3Q9EQJ9 1476 aa34,87■■■■□ 3,17
Ubp1-203ENSMUST00000116492 Abca5Q8K448 1642 aa34,85■■■■□ 3,17
Ubp1-203ENSMUST00000116492 Gm7298A0A0N4SVU1 1476 aa34,84■■■■□ 3,17
Ubp1-203ENSMUST00000116492 Ccer2J3QPU5 274 aa34,84■■■■□ 3,17
Ubp1-203ENSMUST00000116492 Anks4bQ8K3X6 423 aa34,82■■■■□ 3,16
Ubp1-203ENSMUST00000116492 CadpsQ80TJ1 1355 aa34,82■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Vps8Q0P5W1 1427 aa34,81■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Nop58Q6DFW4 536 aaKnown RBP34,81■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Cdk11bP24788 784 aaKnown RBP34,79■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Grin2aP35436 1464 aa34,78■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Naip2Q9QUK4 1447 aa34,77■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Ankrd36D3Z4K0 1415 aa34,77■■■■□ 3,16
Ubp1-203ENSMUST00000116492 Gpatch8A2A6A1 1505 aa34,76■■■■□ 3,15
Ubp1-203ENSMUST00000116492 Ppargc1bQ8VHJ7 1014 aa34,75■■■■□ 3,15
Ubp1-203ENSMUST00000116492 Plb1Q3TTY0 1478 aa34,74■■■■□ 3,15
Ubp1-203ENSMUST00000116492 Lmtk2Q3TYD6 1471 aa34,73■■■■□ 3,15
Ubp1-203ENSMUST00000116492 Adamts12Q811B3 1600 aa34,7■■■■□ 3,15
Ubp1-203ENSMUST00000116492 Disp1Q3TDN0 1521 aa34,7■■■■□ 3,15
Ubp1-203ENSMUST00000116492 A2mQ6GQT1 1474 aa34,64■■■■□ 3,14
Ubp1-203ENSMUST00000116492 Kif27Q7M6Z4 1394 aa34,64■■■■□ 3,14
Ubp1-203ENSMUST00000116492 Ccnb3Q810T2 1396 aa34,63■■■■□ 3,13
Ubp1-203ENSMUST00000116492 UacaQ8CGB3 1411 aa34,63■■■■□ 3,13
Ubp1-203ENSMUST00000116492 WizO88286 1684 aaKnown RBP34,62■■■■□ 3,13
Ubp1-203ENSMUST00000116492 Soga1E1U8D0 1418 aa34,62■■■■□ 3,13
Ubp1-203ENSMUST00000116492 Gcc2Q8CHG3 1679 aa34,55■■■■□ 3,12
Ubp1-203ENSMUST00000116492 Pbrm1Q8BSQ9 1634 aaKnown RBP34,52■■■■□ 3,12
Ubp1-203ENSMUST00000116492 Ift140E9PY46 1464 aa34,52■■■■□ 3,12
Ubp1-203ENSMUST00000116492 Dnajc5bQ9CQ94 199 aa34,51■■■■□ 3,12
Ubp1-203ENSMUST00000116492 Setd1bQ8CFT2 1985 aa34,48■■■■□ 3,11
Ubp1-203ENSMUST00000116492 NexmifQ5DTT1 1515 aa34,46■■■■□ 3,11
Ubp1-203ENSMUST00000116492 Nup160Q9Z0W3 1402 aaKnown RBP34,45■■■■□ 3,11
Ubp1-203ENSMUST00000116492 PxdnQ3UQ28 1475 aa34,44■■■■□ 3,1
Ubp1-203ENSMUST00000116492 BC005561E9Q5E2 1589 aa34,44■■■■□ 3,1
Ubp1-203ENSMUST00000116492 Fhod3Q76LL6 1578 aa34,42■■■■□ 3,1
Ubp1-203ENSMUST00000116492 Dennd4bQ3U1Y4 1499 aa34,42■■■■□ 3,1
Ubp1-203ENSMUST00000116492 Abca16E9PWJ7 1678 aa34,41■■■■□ 3,1
Ubp1-203ENSMUST00000116492 NclP09405 707 aaKnown RBP34,38■■■■□ 3,09
Ubp1-203ENSMUST00000116492 Hspa5P20029 655 aaKnown RBP34,37■■■■□ 3,09
Ubp1-203ENSMUST00000116492 Cul7Q8VE73 1689 aa34,35■■■■□ 3,09
Ubp1-203ENSMUST00000116492 Camsap2Q8C1B1 1461 aa34,34■■■■□ 3,09
Ubp1-203ENSMUST00000116492 Rfx7F8VPJ6 1459 aa34,31■■■■□ 3,08
Ubp1-203ENSMUST00000116492 WrnO09053 1401 aa34,31■■■■□ 3,08
Ubp1-203ENSMUST00000116492 Chic2Q9D9G3 165 aa34,29■■■■□ 3,08
Ubp1-203ENSMUST00000116492 Rapgef6Q5NCJ1 1609 aa34,26■■■■□ 3,08
Ubp1-203ENSMUST00000116492 Mug1P28665 1476 aa34,26■■■■□ 3,08
Ubp1-203ENSMUST00000116492 Gm13697A2AK42 830 aa34,25■■■■□ 3,07
Ubp1-203ENSMUST00000116492 Cc2d2bA0A286YDU8 1405 aa34,23■■■■□ 3,07
Ubp1-203ENSMUST00000116492 Ube2uB1AUC4 352 aa34,21■■■■□ 3,07
Ubp1-203ENSMUST00000116492 Ncoa3O09000 1398 aa34,21■■■■□ 3,07
Ubp1-203ENSMUST00000116492 Ncoa2Q61026 1462 aa34,19■■■■□ 3,06
Ubp1-203ENSMUST00000116492 Naip5Q9R016 1403 aa34,18■■■■□ 3,06
Ubp1-203ENSMUST00000116492 Abcc2Q8VI47 1543 aa34,16■■■■□ 3,06
Ubp1-203ENSMUST00000116492 Shroom2A2ALU4 1481 aa34,14■■■■□ 3,06
Ubp1-203ENSMUST00000116492 Lrriq1Q0P5X1 1673 aa34,14■■■■□ 3,06
Ubp1-203ENSMUST00000116492 Setbp1Q9Z180 1582 aa34,14■■■■□ 3,06
Ubp1-203ENSMUST00000116492 Abcc5Q9R1X5 1436 aa34,13■■■■□ 3,05
Ubp1-203ENSMUST00000116492 Arhgap27A2AB59 869 aa34,12■■■■□ 3,05
Ubp1-203ENSMUST00000116492 Arhgef11Q68FM7 1552 aa34,11■■■■□ 3,05
Ubp1-203ENSMUST00000116492 Plekhh2Q8C115 1491 aa34,11■■■■□ 3,05
Ubp1-203ENSMUST00000116492 Mphosph9A6H5Y1 991 aa34,08■■■■□ 3,05
Ubp1-203ENSMUST00000116492 Csrnp3P59055 597 aa34,08■■■■□ 3,05
Ubp1-203ENSMUST00000116492 Cabp1Q9JLK7 227 aa34,07■■■■□ 3,04
Ubp1-203ENSMUST00000116492 Cdc42bpaQ3UU96 1719 aa34,06■■■■□ 3,04
Ubp1-203ENSMUST00000116492 Arhgef40Q3UPH7 1517 aa34,05■■■■□ 3,04
Ubp1-203ENSMUST00000116492 Kiaa1551Q5DTW7 1521 aa34,04■■■■□ 3,04
Retrieved 100 of 22,080 RNA–protein pairs in 10,2 ms