RNA–Protein interactions for RNA: ENSMUST00000112354.2

Scn9a-203, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 6,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-203ENSMUST00000112354 Mia2Q91ZV0 1396 aa8.95□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Arhgap27A2AB59 869 aa8.94□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Fmn1Q05860 1466 aa8.94□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Ccdc9Q8VC31 543 aaKnown RBP8.93□□□□□ -0.98
Scn9a-203ENSMUST00000112354 IqubQ8CDK3 788 aa8.92□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Mtus2Q3UHD3 1353 aa8.92□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Polr3glQ8R0C0 218 aa8.91□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Cwc22Q8C5N3 908 aaKnown RBP8.91□□□□□ -0.98
Scn9a-203ENSMUST00000112354 Smarca2Q6DIC0 1577 aa8.89□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Plppr3Q7TPB0 716 aa8.89□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Prdm10Q3UTQ7 1184 aa8.88□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Anks4bQ8K3X6 423 aa8.88□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Srpk2O54781 681 aaKnown RBP8.86□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Mrs2Q5NCE8 434 aa8.86□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Phldb1Q6PDH0 1371 aaKnown RBP8.86□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Mroh3A0A1D5RM54 893 aa8.85□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Rgl3Q3UYI5 709 aa8.85□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Atad2bE9Q166 1460 aaKnown RBP8.84□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Rsph4aQ8BYM7 716 aa8.84□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Sall2Q9QX96 1004 aa8.84□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Kif27Q7M6Z4 1394 aa8.84□□□□□ -0.99
Scn9a-203ENSMUST00000112354 Dhx57Q6P5D3 1388 aaKnown RBP8.84□□□□□ -1
Scn9a-203ENSMUST00000112354 P3h3Q8CG70 732 aa8.83□□□□□ -1
Scn9a-203ENSMUST00000112354 Rrp7aQ9D1C9 280 aaKnown RBP8.83□□□□□ -1
Scn9a-203ENSMUST00000112354 Arid4bA2CG63 1314 aaKnown RBP8.82□□□□□ -1
Scn9a-203ENSMUST00000112354 Gm20521D3Z5F7 333 aa8.81□□□□□ -1
Scn9a-203ENSMUST00000112354 Ythdc1E9Q5K9 736 aaKnown RBP8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 Chmp4bQ9D8B3 224 aaKnown RBP8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 Card11Q8CIS0 1159 aa8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 Cep162Q6ZQ06 1403 aa8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 Calr4Q3TQS0 420 aa8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 CftrP26361 1476 aa8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 Mapk8ip2Q9ERE9 830 aa8.8□□□□□ -1
Scn9a-203ENSMUST00000112354 Fgd1P52734 960 aa8.79□□□□□ -1
Scn9a-203ENSMUST00000112354 Fyco1Q8VDC1 1437 aa8.79□□□□□ -1
Scn9a-203ENSMUST00000112354 CntlnA2AM05 1397 aa8.79□□□□□ -1
Scn9a-203ENSMUST00000112354 DaxxO35613 739 aa8.79□□□□□ -1
Scn9a-203ENSMUST00000112354 Exosc9Q9JHI7 438 aaKnown RBP8.79□□□□□ -1
Scn9a-203ENSMUST00000112354 Cux2P70298 1426 aa8.78□□□□□ -1
Scn9a-203ENSMUST00000112354 CatipB9EKE5 520 aa8.78□□□□□ -1
Scn9a-203ENSMUST00000112354 Iqcf3Q9D498 203 aa8.78□□□□□ -1
Scn9a-203ENSMUST00000112354 Carmil1Q6EDY6 1374 aa8.76□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Kdm2aP59997 1161 aa8.75□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Rad21Q61550 635 aaKnown RBP8.75□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Aebp1Q640N1 1128 aa8.75□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Lemd3Q9WU40 921 aa8.75□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Rpap1Q80TE0 1409 aa8.75□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Mapk8ip3Q9ESN9 1337 aa8.74□□□□□ -1.01
Scn9a-203ENSMUST00000112354 NudcO35685 332 aaKnown RBP8.74□□□□□ -1.01
Scn9a-203ENSMUST00000112354 AknaQ80VW7 1404 aa8.73□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Wdr43Q6ZQL4 677 aaKnown RBP8.73□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Smarca4Q3TKT4 1613 aaKnown RBP8.73□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Map4P27546 1125 aaKnown RBP8.73□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Baz1bQ9Z277 1479 aa8.73□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Grwd1Q810D6 446 aaKnown RBP8.72□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Ppp1r18Q8BQ30 594 aa8.72□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Stag3O70576 1240 aa8.72□□□□□ -1.01
Scn9a-203ENSMUST00000112354 Ccdc88bQ4QRL3 1481 aa8.71□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Arhgap35Q91YM2 1499 aa8.71□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Hsp90aa1P07901 733 aaKnown RBP8.7□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Ofd1Q80Z25 1017 aa8.7□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Stk24Q99KH8 431 aa8.7□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Fhad1A6PWD2 1420 aa8.69□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Stard8Q8K031 1019 aa8.69□□□□□ -1.02
Scn9a-203ENSMUST00000112354 LrpprcQ6PB66 1392 aaKnown RBP8.69□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Ppp4r2Q0VGB7 417 aa8.69□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Mbd3Q9Z2D8 285 aaKnown RBP8.68□□□□□ -1.02
Scn9a-203ENSMUST00000112354 ArxO35085 564 aa8.67□□□□□ -1.02
Scn9a-203ENSMUST00000112354 MyclP10166 368 aa8.67□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Csrnp3P59055 597 aa8.67□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Pkd2O35245 966 aa8.67□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Cttnbp2B9EJA2 1648 aa8.67□□□□□ -1.02
Scn9a-203ENSMUST00000112354 BicraF8VPZ9 1578 aa8.65□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Eif4g2Q62448 906 aaKnown RBP8.65□□□□□ -1.02
Scn9a-203ENSMUST00000112354 Bcl11aQ9QYE3 773 aa8.65□□□□□ -1.02
Scn9a-203ENSMUST00000112354 UacaQ8CGB3 1411 aa8.65□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Plekhh2Q8C115 1491 aa8.65□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Gtf2e1Q9D0D5 440 aa8.64□□□□□ -1.03
Scn9a-203ENSMUST00000112354 WrnO09053 1401 aa8.63□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Map7O88735 730 aa8.63□□□□□ -1.03
Scn9a-203ENSMUST00000112354 HdgfP51859 237 aaKnown RBP8.63□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Cecr2E9Q2Z1 1453 aa8.63□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Synj1Q8CHC4 1574 aa8.63□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Rangap1P46061 589 aaKnown RBP8.62□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Arid3cA6PWV5 409 aa8.62□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Dhx29Q6PGC1 1365 aaKnown RBP8.62□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Rock2P70336 1388 aa8.62□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Lmod3E9QA62 571 aa8.62□□□□□ -1.03
Scn9a-203ENSMUST00000112354 1700123L14RikQ3V2K7 440 aa8.62□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Tmf1B9EKI3 1091 aa8.61□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Nup155Q99P88 1391 aaKnown RBP8.61□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Mphosph9A6H5Y1 991 aa8.61□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Pde3bQ61409 1100 aa8.61□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Cabp1Q9JLK7 227 aa8.61□□□□□ -1.03
Scn9a-203ENSMUST00000112354 HnrnpuQ8VEK3 800 aaKnown RBP8.6□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Ncoa2Q61026 1462 aa8.6□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Znf326O88291 580 aa8.6□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Trim26Q99PN3 545 aa8.6□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Hsp90ab1P11499 724 aaKnown RBP8.59□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Rundc1Q0VDN7 615 aa8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 69.3 ms