RNA–Protein interactions for RNA: ENSMUST00000109722.8

Ccm2-203, Transcript of Cerebral cavernous malformations protein 2 homolog, mousemouse

TSL 1 (best) BASIC

Gene Ccm2, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2-203ENSMUST00000109722 Pbrm1Q8BSQ9 1634 aaKnown RBP17.67■□□□□ 0.42
Ccm2-203ENSMUST00000109722 Duox2A2AQ99 1517 aa17.67■□□□□ 0.42
Ccm2-203ENSMUST00000109722 AqrQ8CFQ3 1481 aaKnown RBP17.63■□□□□ 0.41
Ccm2-203ENSMUST00000109722 Plppr3Q7TPB0 716 aa17.63■□□□□ 0.41
Ccm2-203ENSMUST00000109722 Arhgef11Q68FM7 1552 aa17.62■□□□□ 0.41
Ccm2-203ENSMUST00000109722 TnnQ80Z71 1560 aa17.62■□□□□ 0.41
Ccm2-203ENSMUST00000109722 Samd9lQ69Z37 1561 aa17.61■□□□□ 0.41
Ccm2-203ENSMUST00000109722 AdgbG3UZ78 1657 aa17.61■□□□□ 0.41
Ccm2-203ENSMUST00000109722 Dnajc5gQ8C632 165 aa17.61■□□□□ 0.41
Ccm2-203ENSMUST00000109722 Brwd3A2AHJ4 1799 aa17.59■□□□□ 0.41
Ccm2-203ENSMUST00000109722 EprsQ8CGC7 1512 aaKnown RBP17.56■□□□□ 0.4
Ccm2-203ENSMUST00000109722 Mapkbp1Q6NS57 1503 aa17.54■□□□□ 0.4
Ccm2-203ENSMUST00000109722 Ttc37F8VPK0 1563 aa17.53■□□□□ 0.4
Ccm2-203ENSMUST00000109722 MlecQ6ZQI3 291 aaKnown RBP17.53■□□□□ 0.4
Ccm2-203ENSMUST00000109722 CadpsQ80TJ1 1355 aa17.5■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Rad54l2Q99NG0 1466 aa17.49■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Clasp1Q80TV8 1535 aaKnown RBP17.49■□□□□ 0.39
Ccm2-203ENSMUST00000109722 AI481877A2ALV5 1481 aa17.48■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Ccdc136Q3TVA9 1136 aa17.48■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Grin2aP35436 1464 aa17.48■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Magi3Q9EQJ9 1476 aa17.48■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Soga1E1U8D0 1418 aa17.46■□□□□ 0.39
Ccm2-203ENSMUST00000109722 Ifnlr1Q8CGK5 535 aa17.42■□□□□ 0.38
Ccm2-203ENSMUST00000109722 Depdc5P61460 1591 aa17.39■□□□□ 0.37
Ccm2-203ENSMUST00000109722 Fndc1E9Q043 1732 aa17.38■□□□□ 0.37
Ccm2-203ENSMUST00000109722 Dnmt1P13864 1620 aaKnown RBP17.38■□□□□ 0.37
Ccm2-203ENSMUST00000109722 GapdhsQ64467 440 aa17.37■□□□□ 0.37
Ccm2-203ENSMUST00000109722 Neo1P97798 1493 aa17.35■□□□□ 0.37
Ccm2-203ENSMUST00000109722 BC005561E9Q5E2 1589 aa17.35■□□□□ 0.37
Ccm2-203ENSMUST00000109722 Grin2bQ01097 1482 aa17.34■□□□□ 0.37
Ccm2-203ENSMUST00000109722 Gm14025A2AP89 1413 aa17.3■□□□□ 0.36
Ccm2-203ENSMUST00000109722 Arhgef12Q8R4H2 1543 aaKnown RBP17.28■□□□□ 0.36
Ccm2-203ENSMUST00000109722 Zfyve16Q80U44 1528 aa17.25■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Kdm6bQ5NCY0 1641 aa17.25■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Pla2r1Q62028 1487 aa17.24■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Ecm2Q5FW85 670 aa17.23■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Abcc2Q8VI47 1543 aa17.23■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Arid3cA6PWV5 409 aa17.23■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Gpatch8A2A6A1 1505 aa17.22■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Rtl1Q7M732 1744 aa17.22■□□□□ 0.35
Ccm2-203ENSMUST00000109722 Efcab5A0JP43 1406 aa17.2■□□□□ 0.34
Ccm2-203ENSMUST00000109722 Map3k4O08648 1597 aa17.19■□□□□ 0.34
Ccm2-203ENSMUST00000109722 NrkQ9R0G8 1455 aa17.15■□□□□ 0.34
Ccm2-203ENSMUST00000109722 Arhgap27A2AB59 869 aa17.15■□□□□ 0.34
Ccm2-203ENSMUST00000109722 Abca16E9PWJ7 1678 aa17.12■□□□□ 0.33
Ccm2-203ENSMUST00000109722 Lrrc9Q8CDN9 1456 aa17.12■□□□□ 0.33
Ccm2-203ENSMUST00000109722 Znf608Q56A10 1511 aa17.1■□□□□ 0.33
Ccm2-203ENSMUST00000109722 PxdnQ3UQ28 1475 aa17.09■□□□□ 0.33
Ccm2-203ENSMUST00000109722 Rnf17Q99MV7 1640 aa17.04■□□□□ 0.32
Ccm2-203ENSMUST00000109722 Eif4g1Q6NZJ6 1600 aaKnown RBP17.04■□□□□ 0.32
Ccm2-203ENSMUST00000109722 PtprmP28828 1452 aa17.03■□□□□ 0.32
Ccm2-203ENSMUST00000109722 Slx4Q6P1D7 1565 aa17.02■□□□□ 0.32
Ccm2-203ENSMUST00000109722 Naip2Q9QUK4 1447 aa17.01■□□□□ 0.31
Ccm2-203ENSMUST00000109722 WizO88286 1684 aaKnown RBP17■□□□□ 0.31
Ccm2-203ENSMUST00000109722 Fkbp15Q6P9Q6 1216 aaKnown RBP16.99■□□□□ 0.31
Ccm2-203ENSMUST00000109722 TchhA0A0B4J1F9 1599 aa16.98■□□□□ 0.31
Ccm2-203ENSMUST00000109722 SynmQ70IV5 1561 aa16.97■□□□□ 0.31
Ccm2-203ENSMUST00000109722 Fmn1Q05860 1466 aa16.94■□□□□ 0.3
Ccm2-203ENSMUST00000109722 Jph4Q80WT0 628 aa16.94■□□□□ 0.3
Ccm2-203ENSMUST00000109722 AglF8VPN4 1532 aa16.94■□□□□ 0.3
Ccm2-203ENSMUST00000109722 Adamts12Q811B3 1600 aa16.88■□□□□ 0.29
Ccm2-203ENSMUST00000109722 Cngb1E1AZ71 1325 aa16.87■□□□□ 0.29
Ccm2-203ENSMUST00000109722 Igf1rQ60751 1373 aa16.87■□□□□ 0.29
Ccm2-203ENSMUST00000109722 Wdr7Q920I9 1489 aa16.86■□□□□ 0.29
Ccm2-203ENSMUST00000109722 Neurl4Q5NCX5 1563 aa16.84■□□□□ 0.29
Ccm2-203ENSMUST00000109722 Ahdc1Q6PAL7 1594 aaKnown RBP16.84■□□□□ 0.29
Ccm2-203ENSMUST00000109722 SphkapQ6NSW3 1687 aa16.82■□□□□ 0.28
Ccm2-203ENSMUST00000109722 Kdm5bQ80Y84 1544 aa16.82■□□□□ 0.28
Ccm2-203ENSMUST00000109722 Qser1A2BIE1 1698 aa16.8■□□□□ 0.28
Ccm2-203ENSMUST00000109722 MyclP10166 368 aa16.76■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Scn4aQ9ER60 1841 aa16.75■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Adamtsl3G3UXC7 1706 aa16.75■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Rpgrip1Q9EPQ2 1331 aa16.73■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Abca5Q8K448 1642 aa16.73■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Kif7B7ZNG0 1348 aa16.73■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Cul7Q8VE73 1689 aa16.72■□□□□ 0.27
Ccm2-203ENSMUST00000109722 Kif14L0N7N1 1674 aaKnown RBP16.7■□□□□ 0.26
Ccm2-203ENSMUST00000109722 NhsB1AV60 1647 aa16.69■□□□□ 0.26
Ccm2-203ENSMUST00000109722 Rpap1Q80TE0 1409 aa16.69■□□□□ 0.26
Ccm2-203ENSMUST00000109722 Shroom4Q1W617 1475 aa16.68■□□□□ 0.26
Ccm2-203ENSMUST00000109722 Camsap2Q8C1B1 1461 aa16.68■□□□□ 0.26
Ccm2-203ENSMUST00000109722 Rrbp1Q99PL5 1605 aaKnown RBP16.67■□□□□ 0.26
Ccm2-203ENSMUST00000109722 Atp10dQ8K2X1 1416 aa16.67■□□□□ 0.26
Ccm2-203ENSMUST00000109722 A2mQ6GQT1 1474 aa16.65■□□□□ 0.26
Ccm2-203ENSMUST00000109722 Chic1Q8CBW7 227 aa16.64■□□□□ 0.25
Ccm2-203ENSMUST00000109722 Atp10aO54827 1508 aa16.61■□□□□ 0.25
Ccm2-203ENSMUST00000109722 Abca8bQ8K440 1620 aa16.6■□□□□ 0.25
Ccm2-203ENSMUST00000109722 Zeb1Q64318 1117 aa16.6■□□□□ 0.25
Ccm2-203ENSMUST00000109722 Dip2aQ8BWT5 1523 aa16.59■□□□□ 0.25
Ccm2-203ENSMUST00000109722 Gm7298A0A0N4SVU1 1476 aa16.57■□□□□ 0.24
Ccm2-203ENSMUST00000109722 WrnO09053 1401 aa16.55■□□□□ 0.24
Ccm2-203ENSMUST00000109722 Hspa1lP16627 641 aa16.54■□□□□ 0.24
Ccm2-203ENSMUST00000109722 Pip4k2bQ80XI4 416 aa16.54■□□□□ 0.24
Ccm2-203ENSMUST00000109722 Synj2Q9D2G5 1434 aa16.52■□□□□ 0.23
Ccm2-203ENSMUST00000109722 Ltbp4Q8K4G1 1666 aa16.51■□□□□ 0.23
Ccm2-203ENSMUST00000109722 Iqsec2Q5DU25 1478 aa16.51■□□□□ 0.23
Ccm2-203ENSMUST00000109722 Supt6hQ62383 1726 aaKnown RBP16.51■□□□□ 0.23
Ccm2-203ENSMUST00000109722 OvosQ3UU35 1456 aa16.48■□□□□ 0.23
Ccm2-203ENSMUST00000109722 Safb2Q80YR5 991 aaKnown RBP16.46■□□□□ 0.22
Ccm2-203ENSMUST00000109722 Ncoa1P70365 1447 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms