RNA–Protein interactions for RNA: ENSMUST00000109722.8

Ccm2-203, Transcript of Cerebral cavernous malformations protein 2 homolog, mousemouse

TSL 1 (best) BASIC

Gene Ccm2, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccm2-203ENSMUST00000109722 Gm35339A0A140LHH9 1649 aa23.56■■□□□ 1.36
Ccm2-203ENSMUST00000109722 Abcc9P70170 1546 aa23.24■■□□□ 1.31
Ccm2-203ENSMUST00000109722 NischQ80TM9 1593 aa22.71■■□□□ 1.23
Ccm2-203ENSMUST00000109722 ScribQ80U72 1612 aa22.37■■□□□ 1.17
Ccm2-203ENSMUST00000109722 Abcc8B2RUS7 1588 aa22.35■■□□□ 1.17
Ccm2-203ENSMUST00000109722 Dnajc5bQ9CQ94 199 aa22.32■■□□□ 1.16
Ccm2-203ENSMUST00000109722 NacadQ5SWP3 1504 aa21.31■■□□□ 1
Ccm2-203ENSMUST00000109722 Kdm5dQ62240 1548 aa21.26■□□□□ 0.99
Ccm2-203ENSMUST00000109722 Dnajc5P60904 198 aa21.19■□□□□ 0.98
Ccm2-203ENSMUST00000109722 BicraF8VPZ9 1578 aa21.03■□□□□ 0.96
Ccm2-203ENSMUST00000109722 Sycp2Q9CUU3 1500 aa21.01■□□□□ 0.95
Ccm2-203ENSMUST00000109722 Thoc2B1AZI6 1594 aaKnown RBP20.9■□□□□ 0.94
Ccm2-203ENSMUST00000109722 Cc2d2aQ8CFW7 1633 aa20.5■□□□□ 0.87
Ccm2-203ENSMUST00000109722 Pds5bQ4VA53 1446 aaKnown RBP20.46■□□□□ 0.87
Ccm2-203ENSMUST00000109722 Trim41Q5NCC3 630 aa20.41■□□□□ 0.86
Ccm2-203ENSMUST00000109722 Dcaf1Q80TR8 1506 aa20.3■□□□□ 0.84
Ccm2-203ENSMUST00000109722 Fam135aQ6NS59 1506 aa20.13■□□□□ 0.81
Ccm2-203ENSMUST00000109722 Atad2bE9Q166 1460 aaKnown RBP20.07■□□□□ 0.8
Ccm2-203ENSMUST00000109722 Ercc6F8VPZ5 1481 aa20■□□□□ 0.79
Ccm2-203ENSMUST00000109722 Smarca2Q6DIC0 1577 aa19.75■□□□□ 0.75
Ccm2-203ENSMUST00000109722 Rb1cc1Q9ESK9 1588 aa19.71■□□□□ 0.75
Ccm2-203ENSMUST00000109722 Phldb1Q6PDH0 1371 aaKnown RBP19.64■□□□□ 0.73
Ccm2-203ENSMUST00000109722 Baz1bQ9Z277 1479 aa19.63■□□□□ 0.73
Ccm2-203ENSMUST00000109722 Mrc2Q64449 1479 aa19.61■□□□□ 0.73
Ccm2-203ENSMUST00000109722 Wdr62Q3U3T8 1523 aa19.6■□□□□ 0.73
Ccm2-203ENSMUST00000109722 Frmpd1A2AKB4 1549 aa19.59■□□□□ 0.73
Ccm2-203ENSMUST00000109722 Iqgap2Q3UQ44 1575 aa19.57■□□□□ 0.72
Ccm2-203ENSMUST00000109722 Ubl4bQ9CQ84 188 aa19.53■□□□□ 0.72
Ccm2-203ENSMUST00000109722 Col17a1Q07563 1470 aa19.49■□□□□ 0.71
Ccm2-203ENSMUST00000109722 Smarca4Q3TKT4 1613 aaKnown RBP19.47■□□□□ 0.71
Ccm2-203ENSMUST00000109722 Shroom2A2ALU4 1481 aa19.45■□□□□ 0.7
Ccm2-203ENSMUST00000109722 Unc13aQ4KUS2 1712 aa19.37■□□□□ 0.69
Ccm2-203ENSMUST00000109722 Lrriq1Q0P5X1 1673 aa19.37■□□□□ 0.69
Ccm2-203ENSMUST00000109722 Baz1aO88379 1555 aa19.3■□□□□ 0.68
Ccm2-203ENSMUST00000109722 Crybg2B7ZCC2 1516 aa19.3■□□□□ 0.68
Ccm2-203ENSMUST00000109722 Zcchc6Q5BLK4 1491 aaKnown RBP19.25■□□□□ 0.67
Ccm2-203ENSMUST00000109722 Rsf1E9PWW9 1441 aaKnown RBP19.24■□□□□ 0.67
Ccm2-203ENSMUST00000109722 Pcdh10E9PXQ7 1057 aa19.2■□□□□ 0.66
Ccm2-203ENSMUST00000109722 Cecr2E9Q2Z1 1453 aa19.19■□□□□ 0.66
Ccm2-203ENSMUST00000109722 Ccdc180J3QNE4 1664 aa19.02■□□□□ 0.64
Ccm2-203ENSMUST00000109722 Eif4g3Q80XI3 1579 aaKnown RBP19.02■□□□□ 0.64
Ccm2-203ENSMUST00000109722 Top2bQ64511 1612 aa18.98■□□□□ 0.63
Ccm2-203ENSMUST00000109722 Pabpn1Q8CCS6 302 aaKnown RBP18.96■□□□□ 0.63
Ccm2-203ENSMUST00000109722 Kif21aQ9QXL2 1672 aa18.92■□□□□ 0.62
Ccm2-203ENSMUST00000109722 Zcchc11B2RX14 1644 aaKnown RBP18.84■□□□□ 0.61
Ccm2-203ENSMUST00000109722 Arhgef5E9Q7D5 1581 aa18.8■□□□□ 0.6
Ccm2-203ENSMUST00000109722 Pelp1Q9DBD5 1123 aaKnown RBP18.75■□□□□ 0.59
Ccm2-203ENSMUST00000109722 Cux2P70298 1426 aa18.7■□□□□ 0.58
Ccm2-203ENSMUST00000109722 Plb1Q3TTY0 1478 aa18.55■□□□□ 0.56
Ccm2-203ENSMUST00000109722 Urb2E9Q7L1 1524 aaKnown RBP18.55■□□□□ 0.56
Ccm2-203ENSMUST00000109722 Cypt1Q8CH20 168 aa18.5■□□□□ 0.55
Ccm2-203ENSMUST00000109722 Adgrl3Q80TS3 1537 aa18.5■□□□□ 0.55
Ccm2-203ENSMUST00000109722 Ttbk1Q6PCN3 1308 aa18.49■□□□□ 0.55
Ccm2-203ENSMUST00000109722 CftrP26361 1476 aa18.43■□□□□ 0.54
Ccm2-203ENSMUST00000109722 Kif15Q6P9L6 1387 aa18.42■□□□□ 0.54
Ccm2-203ENSMUST00000109722 Cttnbp2B9EJA2 1648 aa18.4■□□□□ 0.54
Ccm2-203ENSMUST00000109722 PtprtQ99M80 1454 aa18.39■□□□□ 0.53
Ccm2-203ENSMUST00000109722 Rhox8Q6VSS7 320 aa18.37■□□□□ 0.53
Ccm2-203ENSMUST00000109722 Rusc2Q80U22 1514 aa18.36■□□□□ 0.53
Ccm2-203ENSMUST00000109722 Synj1Q8CHC4 1574 aa18.32■□□□□ 0.52
Ccm2-203ENSMUST00000109722 Plekhg3Q4VAC9 1341 aa18.32■□□□□ 0.52
Ccm2-203ENSMUST00000109722 Npm1Q61937 292 aaKnown RBP18.3■□□□□ 0.52
Ccm2-203ENSMUST00000109722 Gm156Q58A37 223 aa18.27■□□□□ 0.51
Ccm2-203ENSMUST00000109722 Cep170Q6A065 1588 aa18.26■□□□□ 0.51
Ccm2-203ENSMUST00000109722 PtprkP35822 1457 aa18.24■□□□□ 0.51
Ccm2-203ENSMUST00000109722 Dhx29Q6PGC1 1365 aaKnown RBP18.22■□□□□ 0.51
Ccm2-203ENSMUST00000109722 Pprc1Q6NZN1 1644 aa18.21■□□□□ 0.51
Ccm2-203ENSMUST00000109722 Cep164Q5DU05 1446 aa18.18■□□□□ 0.5
Ccm2-203ENSMUST00000109722 Lamc3Q9R0B6 1581 aa18.15■□□□□ 0.5
Ccm2-203ENSMUST00000109722 Gapvd1Q6PAR5 1458 aa18.13■□□□□ 0.49
Ccm2-203ENSMUST00000109722 Crocc2F6XLV1 1638 aa18.11■□□□□ 0.49
Ccm2-203ENSMUST00000109722 Ift140E9PY46 1464 aa18.09■□□□□ 0.49
Ccm2-203ENSMUST00000109722 LrpprcQ6PB66 1392 aaKnown RBP17.94■□□□□ 0.46
Ccm2-203ENSMUST00000109722 Setd1bQ8CFT2 1985 aa17.93■□□□□ 0.46
Ccm2-203ENSMUST00000109722 Rapgef2Q8CHG7 1496 aa17.92■□□□□ 0.46
Ccm2-203ENSMUST00000109722 Alpk3Q924C5 1678 aa17.92■□□□□ 0.46
Ccm2-203ENSMUST00000109722 Il27Q8K3I6 234 aa17.91■□□□□ 0.46
Ccm2-203ENSMUST00000109722 Brd4Q9ESU6 1400 aaKnown RBP17.91■□□□□ 0.46
Ccm2-203ENSMUST00000109722 Esf1Q3V1V3 845 aaKnown RBP17.89■□□□□ 0.45
Ccm2-203ENSMUST00000109722 Disp1Q3TDN0 1521 aa17.88■□□□□ 0.45
Ccm2-203ENSMUST00000109722 Setbp1Q9Z180 1582 aa17.86■□□□□ 0.45
Ccm2-203ENSMUST00000109722 Fbxo41Q6NS60 873 aa17.82■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Ythdc2B2RR83 1445 aaKnown RBP17.82■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Ppp1r18Q8BQ30 594 aa17.81■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Nup160Q9Z0W3 1402 aaKnown RBP17.81■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Ccdc88bQ4QRL3 1481 aa17.8■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Fgd6Q69ZL1 1399 aa17.79■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Camsap1A2AHC3 1581 aa17.79■□□□□ 0.44
Ccm2-203ENSMUST00000109722 PogzQ8BZH4 1409 aaKnown RBP17.77■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Ccdc18Q640L5 1455 aa17.77■□□□□ 0.44
Ccm2-203ENSMUST00000109722 Abcc1O35379 1528 aa17.76■□□□□ 0.43
Ccm2-203ENSMUST00000109722 Cc2d2bA0A286YDU8 1405 aa17.76■□□□□ 0.43
Ccm2-203ENSMUST00000109722 Cyb5rlB1AS42 316 aa17.76■□□□□ 0.43
Ccm2-203ENSMUST00000109722 Hecw2Q6I6G8 1578 aa17.74■□□□□ 0.43
Ccm2-203ENSMUST00000109722 Ercc6l2Q9JIM3 1537 aa17.73■□□□□ 0.43
Ccm2-203ENSMUST00000109722 Golga3P55937 1487 aa17.72■□□□□ 0.43
Ccm2-203ENSMUST00000109722 Ak9G3UYQ4 1894 aa17.7■□□□□ 0.42
Ccm2-203ENSMUST00000109722 Top2aQ01320 1528 aaKnown RBP17.69■□□□□ 0.42
Ccm2-203ENSMUST00000109722 Chd1P40201 1711 aa17.68■□□□□ 0.42
Ccm2-203ENSMUST00000109722 AknaQ80VW7 1404 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms