RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Mrs2Q5NCE8 434 aa22.55■■□□□ 1.2
Usp47-201ENSMUST00000106653 Rgl3Q3UYI5 709 aa22.53■■□□□ 1.2
Usp47-201ENSMUST00000106653 Rad21Q61550 635 aaKnown RBP22.52■■□□□ 1.2
Usp47-201ENSMUST00000106653 Safb2Q80YR5 991 aaKnown RBP22.49■■□□□ 1.19
Usp47-201ENSMUST00000106653 Calr4Q3TQS0 420 aa22.49■■□□□ 1.19
Usp47-201ENSMUST00000106653 Upf2A2AT37 1269 aaKnown RBP22.49■■□□□ 1.19
Usp47-201ENSMUST00000106653 DaxxO35613 739 aa22.48■■□□□ 1.19
Usp47-201ENSMUST00000106653 Pds5bQ4VA53 1446 aaKnown RBP22.43■■□□□ 1.18
Usp47-201ENSMUST00000106653 Rangap1P46061 589 aaKnown RBP22.43■■□□□ 1.18
Usp47-201ENSMUST00000106653 ArxO35085 564 aa22.43■■□□□ 1.18
Usp47-201ENSMUST00000106653 P3h3Q8CG70 732 aa22.41■■□□□ 1.18
Usp47-201ENSMUST00000106653 Ppp4r2Q0VGB7 417 aa22.38■■□□□ 1.17
Usp47-201ENSMUST00000106653 Aebp2Q9Z248 504 aaKnown RBP22.36■■□□□ 1.17
Usp47-201ENSMUST00000106653 Mtus2Q3UHD3 1353 aa22.32■■□□□ 1.16
Usp47-201ENSMUST00000106653 Ccdc88bQ4QRL3 1481 aa22.31■■□□□ 1.16
Usp47-201ENSMUST00000106653 Sycp2Q9CUU3 1500 aa22.31■■□□□ 1.16
Usp47-201ENSMUST00000106653 Aplp2Q06335 707 aa22.31■■□□□ 1.16
Usp47-201ENSMUST00000106653 Grwd1Q810D6 446 aaKnown RBP22.31■■□□□ 1.16
Usp47-201ENSMUST00000106653 Fmn1Q05860 1466 aa22.3■■□□□ 1.16
Usp47-201ENSMUST00000106653 Kdm2aP59997 1161 aa22.27■■□□□ 1.16
Usp47-201ENSMUST00000106653 Rrp7aQ9D1C9 280 aaKnown RBP22.27■■□□□ 1.16
Usp47-201ENSMUST00000106653 DiexfQ8BTT6 772 aaKnown RBP22.25■■□□□ 1.15
Usp47-201ENSMUST00000106653 Mroh3A0A1D5RM54 893 aa22.24■■□□□ 1.15
Usp47-201ENSMUST00000106653 Mia2Q91ZV0 1396 aa22.24■■□□□ 1.15
Usp47-201ENSMUST00000106653 Wdr43Q6ZQL4 677 aaKnown RBP22.24■■□□□ 1.15
Usp47-201ENSMUST00000106653 Card11Q8CIS0 1159 aa22.24■■□□□ 1.15
Usp47-201ENSMUST00000106653 IqubQ8CDK3 788 aa22.23■■□□□ 1.15
Usp47-201ENSMUST00000106653 Srpk2O54781 681 aaKnown RBP22.22■■□□□ 1.15
Usp47-201ENSMUST00000106653 Cep162Q6ZQ06 1403 aa22.21■■□□□ 1.15
Usp47-201ENSMUST00000106653 Cwc22Q8C5N3 908 aaKnown RBP22.16■■□□□ 1.14
Usp47-201ENSMUST00000106653 Trim26Q99PN3 545 aa22.16■■□□□ 1.14
Usp47-201ENSMUST00000106653 Gm20521D3Z5F7 333 aa22.16■■□□□ 1.14
Usp47-201ENSMUST00000106653 Kif27Q7M6Z4 1394 aa22.14■■□□□ 1.13
Usp47-201ENSMUST00000106653 Ofd1Q80Z25 1017 aa22.12■■□□□ 1.13
Usp47-201ENSMUST00000106653 Crybg2B7ZCC2 1516 aa22.12■■□□□ 1.13
Usp47-201ENSMUST00000106653 Fgd1P52734 960 aa22.11■■□□□ 1.13
Usp47-201ENSMUST00000106653 Stk24Q99KH8 431 aa22.08■■□□□ 1.12
Usp47-201ENSMUST00000106653 CftrP26361 1476 aa22.07■■□□□ 1.12
Usp47-201ENSMUST00000106653 Exosc9Q9JHI7 438 aaKnown RBP22.07■■□□□ 1.12
Usp47-201ENSMUST00000106653 Aebp1Q640N1 1128 aa22.05■■□□□ 1.12
Usp47-201ENSMUST00000106653 Hspa5P20029 655 aaKnown RBP22.03■■□□□ 1.12
Usp47-201ENSMUST00000106653 Cecr2E9Q2Z1 1453 aa22.01■■□□□ 1.11
Usp47-201ENSMUST00000106653 Rpap1Q80TE0 1409 aa22■■□□□ 1.11
Usp47-201ENSMUST00000106653 Stag3O70576 1240 aa21.98■■□□□ 1.11
Usp47-201ENSMUST00000106653 Cux2P70298 1426 aa21.98■■□□□ 1.11
Usp47-201ENSMUST00000106653 Baz1bQ9Z277 1479 aa21.98■■□□□ 1.11
Usp47-201ENSMUST00000106653 Fyco1Q8VDC1 1437 aa21.96■■□□□ 1.11
Usp47-201ENSMUST00000106653 Smarca2Q6DIC0 1577 aa21.95■■□□□ 1.1
Usp47-201ENSMUST00000106653 AknaQ80VW7 1404 aa21.95■■□□□ 1.1
Usp47-201ENSMUST00000106653 Map4P27546 1125 aaKnown RBP21.94■■□□□ 1.1
Usp47-201ENSMUST00000106653 Synj1Q8CHC4 1574 aa21.93■■□□□ 1.1
Usp47-201ENSMUST00000106653 Irx6Q9ER75 438 aa21.93■■□□□ 1.1
Usp47-201ENSMUST00000106653 Pkd2O35245 966 aa21.92■■□□□ 1.1
Usp47-201ENSMUST00000106653 Neurod2Q62414 383 aa21.91■■□□□ 1.1
Usp47-201ENSMUST00000106653 Mapk8ip3Q9ESN9 1337 aa21.9■■□□□ 1.1
Usp47-201ENSMUST00000106653 CntlnA2AM05 1397 aa21.9■■□□□ 1.1
Usp47-201ENSMUST00000106653 Apbb1Q9QXJ1 710 aa21.89■■□□□ 1.09
Usp47-201ENSMUST00000106653 Arhgap35Q91YM2 1499 aa21.88■■□□□ 1.09
Usp47-201ENSMUST00000106653 Trim30dE9PWL0 497 aa21.87■■□□□ 1.09
Usp47-201ENSMUST00000106653 Phldb1Q6PDH0 1371 aaKnown RBP21.87■■□□□ 1.09
Usp47-201ENSMUST00000106653 Atad2bE9Q166 1460 aaKnown RBP21.85■■□□□ 1.09
Usp47-201ENSMUST00000106653 Hsp90ab1P11499 724 aaKnown RBP21.85■■□□□ 1.09
Usp47-201ENSMUST00000106653 ScribQ80U72 1612 aa21.85■■□□□ 1.09
Usp47-201ENSMUST00000106653 NgefQ8CHT1 710 aa21.84■■□□□ 1.09
Usp47-201ENSMUST00000106653 MyclP10166 368 aa21.84■■□□□ 1.09
Usp47-201ENSMUST00000106653 Ppp1r18Q8BQ30 594 aa21.84■■□□□ 1.09
Usp47-201ENSMUST00000106653 Cnga1P29974 684 aa21.83■■□□□ 1.09
Usp47-201ENSMUST00000106653 Rundc1Q0VDN7 615 aa21.82■■□□□ 1.08
Usp47-201ENSMUST00000106653 Cabp1Q9JLK7 227 aa21.82■■□□□ 1.08
Usp47-201ENSMUST00000106653 Smarca4Q3TKT4 1613 aaKnown RBP21.82■■□□□ 1.08
Usp47-201ENSMUST00000106653 Arid3cA6PWV5 409 aa21.81■■□□□ 1.08
Usp47-201ENSMUST00000106653 DekQ7TNV0 380 aaKnown RBP21.81■■□□□ 1.08
Usp47-201ENSMUST00000106653 CanxP35564 591 aaKnown RBP21.8■■□□□ 1.08
Usp47-201ENSMUST00000106653 Rapgef2Q8CHG7 1496 aa21.8■■□□□ 1.08
Usp47-201ENSMUST00000106653 Mphosph9A6H5Y1 991 aa21.79■■□□□ 1.08
Usp47-201ENSMUST00000106653 Carmil1Q6EDY6 1374 aa21.78■■□□□ 1.08
Usp47-201ENSMUST00000106653 Trak1Q6PD31 939 aa21.78■■□□□ 1.08
Usp47-201ENSMUST00000106653 Wwc2Q6NXJ0 1187 aa21.75■■□□□ 1.07
Usp47-201ENSMUST00000106653 Ifit1bl1D3Z6F0 470 aa21.75■■□□□ 1.07
Usp47-201ENSMUST00000106653 Hsp90aa1P07901 733 aaKnown RBP21.74■■□□□ 1.07
Usp47-201ENSMUST00000106653 Fhad1A6PWD2 1420 aa21.74■■□□□ 1.07
Usp47-201ENSMUST00000106653 Dhx57Q6P5D3 1388 aaKnown RBP21.73■■□□□ 1.07
Usp47-201ENSMUST00000106653 Gm6268A2A3U9 297 aa21.72■■□□□ 1.07
Usp47-201ENSMUST00000106653 Vsig10D3YX43 558 aa21.72■■□□□ 1.07
Usp47-201ENSMUST00000106653 Iqcf3Q9D498 203 aa21.72■■□□□ 1.07
Usp47-201ENSMUST00000106653 Lemd3Q9WU40 921 aa21.72■■□□□ 1.07
Usp47-201ENSMUST00000106653 Cttnbp2B9EJA2 1648 aa21.7■■□□□ 1.07
Usp47-201ENSMUST00000106653 Sin3aQ60520 1274 aaKnown RBP21.69■■□□□ 1.06
Usp47-201ENSMUST00000106653 NudcO35685 332 aaKnown RBP21.68■■□□□ 1.06
Usp47-201ENSMUST00000106653 Gtf2e1Q9D0D5 440 aa21.68■■□□□ 1.06
Usp47-201ENSMUST00000106653 1700123L14RikQ3V2K7 440 aa21.67■■□□□ 1.06
Usp47-201ENSMUST00000106653 Zfp777B9EKF4 885 aa21.66■■□□□ 1.06
Usp47-201ENSMUST00000106653 Plekhh2Q8C115 1491 aa21.66■■□□□ 1.06
Usp47-201ENSMUST00000106653 Nup155Q99P88 1391 aaKnown RBP21.64■■□□□ 1.05
Usp47-201ENSMUST00000106653 Fam71e1A1L3C1 212 aa21.63■■□□□ 1.05
Usp47-201ENSMUST00000106653 LrpprcQ6PB66 1392 aaKnown RBP21.63■■□□□ 1.05
Usp47-201ENSMUST00000106653 Chmp4bQ9D8B3 224 aaKnown RBP21.63■■□□□ 1.05
Usp47-201ENSMUST00000106653 Tmf1B9EKI3 1091 aa21.63■■□□□ 1.05
Usp47-201ENSMUST00000106653 Arid4bA2CG63 1314 aaKnown RBP21.62■■□□□ 1.05
Usp47-201ENSMUST00000106653 Stk26Q99JT2 416 aa21.62■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms