RNA–Protein interactions for RNA: ENSMUST00000105490.2

Prdm1-202, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prdm1, Length 4,025 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-202ENSMUST00000105490 Sin3aQ60520 1274 aaKnown RBP14.28□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Upf2A2AT37 1269 aaKnown RBP14.27□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Chic2Q9D9G3 165 aa14.27□□□□□ -0.13
Prdm1-202ENSMUST00000105490 Hspa5P20029 655 aaKnown RBP14.24□□□□□ -0.13
Prdm1-202ENSMUST00000105490 CanxP35564 591 aaKnown RBP14.24□□□□□ -0.13
Prdm1-202ENSMUST00000105490 Wwc2Q6NXJ0 1187 aa14.24□□□□□ -0.13
Prdm1-202ENSMUST00000105490 Golga3P55937 1487 aa14.2□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Gtf3c3Q3TMP1 882 aa14.2□□□□□ -0.14
Prdm1-202ENSMUST00000105490 BlmO88700 1416 aa14.2□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Ofd1Q80Z25 1017 aa14.19□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Ccdc9Q8VC31 543 aaKnown RBP14.19□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Znf710Q3U288 666 aa14.18□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Plcd4Q8K3R3 807 aa14.16□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Prdm10Q3UTQ7 1184 aa14.16□□□□□ -0.14
Prdm1-202ENSMUST00000105490 Pak3Q61036 559 aa14.16□□□□□ -0.14
Prdm1-202ENSMUST00000105490 4930567H17RikQ3V0K5 233 aa14.13□□□□□ -0.15
Prdm1-202ENSMUST00000105490 Spryd3E9Q9B3 442 aa14.12□□□□□ -0.15
Prdm1-202ENSMUST00000105490 ChgaP26339 463 aaKnown RBP14.12□□□□□ -0.15
Prdm1-202ENSMUST00000105490 B4galnt3Q6L8S8 986 aa14.12□□□□□ -0.15
Prdm1-202ENSMUST00000105490 Dbr1Q923B1 550 aa14.12□□□□□ -0.15
Prdm1-202ENSMUST00000105490 Setd5Q5XJV7 1441 aa14.11□□□□□ -0.15
Prdm1-202ENSMUST00000105490 Taok2Q6ZQ29 1240 aa14.09□□□□□ -0.15
Prdm1-202ENSMUST00000105490 Polr3glQ8R0C0 218 aa14.07□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Gm13697A2AK42 830 aa14.06□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Ythdc1E9Q5K9 736 aaKnown RBP14.06□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Ccer2J3QPU5 274 aa14.06□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Os9Q8K2C7 672 aa14.05□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Apbb1Q9QXJ1 710 aa14.05□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Pknox2Q8BG99 474 aa14.05□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Trim30dE9PWL0 497 aa14.04□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Rangap1P46061 589 aaKnown RBP14.04□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Vsig10D3YX43 558 aa14.04□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Exoc6Q8R313 802 aa14.04□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Tcerg1Q8CGF7 1100 aaKnown RBP14.03□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Ipo9Q91YE6 1041 aa14.03□□□□□ -0.16
Prdm1-202ENSMUST00000105490 Arid4bA2CG63 1314 aaKnown RBP14□□□□□ -0.17
Prdm1-202ENSMUST00000105490 Cep162Q6ZQ06 1403 aa13.99□□□□□ -0.17
Prdm1-202ENSMUST00000105490 Rgl3Q3UYI5 709 aa13.97□□□□□ -0.17
Prdm1-202ENSMUST00000105490 Hsp90ab1P11499 724 aaKnown RBP13.96□□□□□ -0.18
Prdm1-202ENSMUST00000105490 Eea1Q8BL66 1411 aa13.94□□□□□ -0.18
Prdm1-202ENSMUST00000105490 Lmod3E9QA62 571 aa13.94□□□□□ -0.18
Prdm1-202ENSMUST00000105490 Sycp2Q9CUU3 1500 aa13.93□□□□□ -0.18
Prdm1-202ENSMUST00000105490 Rtn4Q99P72 1162 aaKnown RBP13.93□□□□□ -0.18
Prdm1-202ENSMUST00000105490 Grwd1Q810D6 446 aaKnown RBP13.91□□□□□ -0.18
Prdm1-202ENSMUST00000105490 DekQ7TNV0 380 aaKnown RBP13.9□□□□□ -0.18
Prdm1-202ENSMUST00000105490 Nlrp6Q91WS2 869 aa13.89□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Kcnh8P59111 1102 aa13.88□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Smg6P61406 1418 aaKnown RBP13.87□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Smarca2Q6DIC0 1577 aa13.87□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Crybg2B7ZCC2 1516 aa13.86□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Trim26Q99PN3 545 aa13.86□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Armcx1Q9CX83 456 aa13.86□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Dnttip2Q8R2M2 758 aaKnown RBP13.86□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Npm1Q61937 292 aaKnown RBP13.85□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Rapgef2Q8CHG7 1496 aa13.84□□□□□ -0.19
Prdm1-202ENSMUST00000105490 AU015836B2RUM3 263 aa13.84□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Dnai1Q8C0M8 701 aa13.84□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Znf692Q3U381 531 aa13.83□□□□□ -0.19
Prdm1-202ENSMUST00000105490 Neurod2Q62414 383 aa13.83□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Baz1bQ9Z277 1479 aa13.83□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Chmp5Q9D7S9 219 aa13.82□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Trim44Q9QXA7 346 aa13.82□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Erich6D3Z6S9 713 aa13.82□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Ppm1gQ61074 542 aa13.81□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Sart3Q9JLI8 962 aaKnown RBP13.81□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Plcb2A3KGF7 1181 aa13.8□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Cecr2E9Q2Z1 1453 aa13.78□□□□□ -0.2
Prdm1-202ENSMUST00000105490 Rpap1Q80TE0 1409 aa13.78□□□□□ -0.2
Prdm1-202ENSMUST00000105490 IbspQ61711 324 aa13.77□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Washc2Q6PGL7 1334 aa13.77□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Card11Q8CIS0 1159 aa13.76□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Fkbp15Q6P9Q6 1216 aaKnown RBP13.75□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Htatsf1Q8BGC0 757 aa13.75□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Gm13695A2AK44 830 aa13.74□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Slc4a2P13808 1237 aaKnown RBP13.74□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Arhgap27A2AB59 869 aa13.74□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Iqcf3Q9D498 203 aa13.73□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Gm6268A2A3U9 297 aa13.72□□□□□ -0.21
Prdm1-202ENSMUST00000105490 Pkd2O35245 966 aa13.7□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Fgd1P52734 960 aa13.7□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Liat1Q810M6 228 aa13.7□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Ipo4Q8VI75 1082 aa13.69□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Rundc1Q0VDN7 615 aa13.68□□□□□ -0.22
Prdm1-202ENSMUST00000105490 EspnQ9ET47 871 aa13.67□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Eif2s2Q99L45 331 aaKnown RBP13.66□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Mia2Q91ZV0 1396 aa13.66□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Mphosph9A6H5Y1 991 aa13.65□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Cwc22Q8C5N3 908 aaKnown RBP13.65□□□□□ -0.22
Prdm1-202ENSMUST00000105490 Rwdd1Q9CQK7 243 aa13.64□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Ncapd3Q6ZQK0 1506 aa13.63□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Zscan21Q07231 555 aa13.63□□□□□ -0.23
Prdm1-202ENSMUST00000105490 CrbnQ8C7D2 445 aa13.63□□□□□ -0.23
Prdm1-202ENSMUST00000105490 CntlnA2AM05 1397 aa13.62□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Ecm2Q5FW85 670 aa13.62□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Mak16Q8BGS0 296 aaKnown RBP13.62□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Ttll13A4Q9F6 804 aa13.61□□□□□ -0.23
Prdm1-202ENSMUST00000105490 SlkO54988 1233 aa13.61□□□□□ -0.23
Prdm1-202ENSMUST00000105490 PtmaP26350 111 aa13.61□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Erich6bQ9D4S6 220 aa13.59□□□□□ -0.23
Prdm1-202ENSMUST00000105490 Synj1Q8CHC4 1574 aa13.58□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms