RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Gm38655A0A286YDK6 273 aa20.23■□□□□ 0.83
Hoxc4-201ENSMUST00000100164 Pabpn1Q8CCS6 302 aaKnown RBP20.22■□□□□ 0.83
Hoxc4-201ENSMUST00000100164 Bcl11aQ9QYE3 773 aa20.21■□□□□ 0.83
Hoxc4-201ENSMUST00000100164 Col17a1Q07563 1470 aa20.2■□□□□ 0.82
Hoxc4-201ENSMUST00000100164 Duox2A2AQ99 1517 aa20.18■□□□□ 0.82
Hoxc4-201ENSMUST00000100164 Fam71e1A1L3C1 212 aa20.15■□□□□ 0.82
Hoxc4-201ENSMUST00000100164 Ppargc1bQ8VHJ7 1014 aa20.12■□□□□ 0.81
Hoxc4-201ENSMUST00000100164 Grin2bQ01097 1482 aa20.12■□□□□ 0.81
Hoxc4-201ENSMUST00000100164 Disp1Q3TDN0 1521 aa20.08■□□□□ 0.81
Hoxc4-201ENSMUST00000100164 Ncapd3Q6ZQK0 1506 aa20.07■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Efcab5A0JP43 1406 aa20.06■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Pbrm1Q8BSQ9 1634 aaKnown RBP20.05■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Cc2d2bA0A286YDU8 1405 aa20.05■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Hnrnpul2Q00PI9 745 aaKnown RBP20.04■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Zcchc11B2RX14 1644 aaKnown RBP20.04■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Nup160Q9Z0W3 1402 aaKnown RBP20.04■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Cep162Q6ZQ06 1403 aa20.03■□□□□ 0.8
Hoxc4-201ENSMUST00000100164 Pelp1Q9DBD5 1123 aaKnown RBP19.99■□□□□ 0.79
Hoxc4-201ENSMUST00000100164 Samd9lQ69Z37 1561 aa19.98■□□□□ 0.79
Hoxc4-201ENSMUST00000100164 Top2aQ01320 1528 aaKnown RBP19.98■□□□□ 0.79
Hoxc4-201ENSMUST00000100164 SafbD3YXK2 937 aaKnown RBP19.94■□□□□ 0.78
Hoxc4-201ENSMUST00000100164 Rtl5Q5DTT4 599 aa19.92■□□□□ 0.78
Hoxc4-201ENSMUST00000100164 Setd1bQ8CFT2 1985 aa19.92■□□□□ 0.78
Hoxc4-201ENSMUST00000100164 Anp32aO35381 247 aa19.9■□□□□ 0.78
Hoxc4-201ENSMUST00000100164 NrkQ9R0G8 1455 aa19.89■□□□□ 0.78
Hoxc4-201ENSMUST00000100164 Mapk8ip2Q9ERE9 830 aa19.87■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 Eif4g1Q6NZJ6 1600 aaKnown RBP19.87■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 Grin2aP35436 1464 aa19.86■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 AqrQ8CFQ3 1481 aaKnown RBP19.86■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 Fgd6Q69ZL1 1399 aa19.84■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 Kdm5bQ80Y84 1544 aa19.84■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 Magi3Q9EQJ9 1476 aa19.83■□□□□ 0.77
Hoxc4-201ENSMUST00000100164 Rad54l2Q99NG0 1466 aa19.83■□□□□ 0.76
Hoxc4-201ENSMUST00000100164 Clip1Q922J3 1391 aa19.83■□□□□ 0.76
Hoxc4-201ENSMUST00000100164 Stra8P70278 393 aa19.81■□□□□ 0.76
Hoxc4-201ENSMUST00000100164 Gpatch8A2A6A1 1505 aa19.8■□□□□ 0.76
Hoxc4-201ENSMUST00000100164 Znf710Q3U288 666 aa19.78■□□□□ 0.76
Hoxc4-201ENSMUST00000100164 Shroom4Q1W617 1475 aa19.75■□□□□ 0.75
Hoxc4-201ENSMUST00000100164 Myt1lP97500 1187 aa19.74■□□□□ 0.75
Hoxc4-201ENSMUST00000100164 Adgrl3Q80TS3 1537 aa19.73■□□□□ 0.75
Hoxc4-201ENSMUST00000100164 PtprkP35822 1457 aa19.73■□□□□ 0.75
Hoxc4-201ENSMUST00000100164 SynmQ70IV5 1561 aa19.7■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Plekhg3Q4VAC9 1341 aa19.7■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Rpap1Q80TE0 1409 aa19.7■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Pla2r1Q62028 1487 aa19.69■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Gapvd1Q6PAR5 1458 aa19.69■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Cep170Q6A065 1588 aa19.69■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Ap3b1Q9Z1T1 1105 aa19.68■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 TchhA0A0B4J1F9 1599 aa19.67■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Arhgef5E9Q7D5 1581 aa19.65■□□□□ 0.74
Hoxc4-201ENSMUST00000100164 Gm156Q58A37 223 aa19.64■□□□□ 0.73
Hoxc4-201ENSMUST00000100164 CadpsQ80TJ1 1355 aa19.63■□□□□ 0.73
Hoxc4-201ENSMUST00000100164 Abcc1O35379 1528 aa19.62■□□□□ 0.73
Hoxc4-201ENSMUST00000100164 AknaQ80VW7 1404 aa19.61■□□□□ 0.73
Hoxc4-201ENSMUST00000100164 PtprtQ99M80 1454 aa19.57■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Nolc1E9Q5C9 702 aaKnown RBP19.56■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Calr4Q3TQS0 420 aa19.56■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Npm2Q80W85 207 aa19.55■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Ythdc2B2RR83 1445 aaKnown RBP19.54■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 PrkcshO08795 521 aa19.53■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Ifnlr1Q8CGK5 535 aa19.53■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Ttbk1Q6PCN3 1308 aa19.52■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Dnmt1P13864 1620 aaKnown RBP19.52■□□□□ 0.72
Hoxc4-201ENSMUST00000100164 Eid3Q3V124 375 aa19.52■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Arap1Q4LDD4 1452 aa19.51■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 UacaQ8CGB3 1411 aa19.51■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Eea1Q8BL66 1411 aa19.51■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Chd1P40201 1711 aa19.5■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Soga1E1U8D0 1418 aa19.49■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Mroh2bQ7M6Y6 1581 aa19.48■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Map3k4O08648 1597 aa19.48■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Arhgap35Q91YM2 1499 aa19.48■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Adamts12Q811B3 1600 aa19.47■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Pcdh10E9PXQ7 1057 aa19.46■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Abca16E9PWJ7 1678 aa19.46■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Abcc2Q8VI47 1543 aa19.46■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 Supt16hQ920B9 1047 aa19.46■□□□□ 0.71
Hoxc4-201ENSMUST00000100164 EprsQ8CGC7 1512 aaKnown RBP19.45■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Arhgap27A2AB59 869 aa19.44■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Gm14025A2AP89 1413 aa19.44■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Neo1P97798 1493 aa19.43■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Gm13697A2AK42 830 aa19.43■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Washc2Q6PGL7 1334 aa19.43■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 WizO88286 1684 aaKnown RBP19.42■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Pprc1Q6NZN1 1644 aa19.42■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 PxdnQ3UQ28 1475 aa19.41■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 Tiam1Q60610 1591 aa19.39■□□□□ 0.7
Hoxc4-201ENSMUST00000100164 BC005561E9Q5E2 1589 aa19.39■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Setbp1Q9Z180 1582 aa19.38■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Camsap2Q8C1B1 1461 aa19.37■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Carmil1Q6EDY6 1374 aa19.37■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 NclP09405 707 aaKnown RBP19.35■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Map3k1P53349 1493 aa19.35■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 AI481877A2ALV5 1481 aa19.35■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Ankrd36D3Z4K0 1415 aa19.34■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Slx4Q6P1D7 1565 aa19.34■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Arhgef12Q8R4H2 1543 aaKnown RBP19.33■□□□□ 0.69
Hoxc4-201ENSMUST00000100164 Smg6P61406 1418 aaKnown RBP19.3■□□□□ 0.68
Hoxc4-201ENSMUST00000100164 Setd5Q5XJV7 1441 aa19.3■□□□□ 0.68
Hoxc4-201ENSMUST00000100164 Ccer2J3QPU5 274 aa19.28■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 66.6 ms