RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Fam135aQ6NS59 1506 aa14.9□□□□□ -0.02
Ldb3-205ENSMUST00000090040 TnnQ80Z71 1560 aa14.89□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Fyco1Q8VDC1 1437 aa14.89□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Kif27Q7M6Z4 1394 aa14.89□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Thoc2B1AZI6 1594 aaKnown RBP14.89□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Ifnlr1Q8CGK5 535 aa14.87□□□□□ -0.03
Ldb3-205ENSMUST00000090040 PtprkP35822 1457 aa14.86□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Mroh2bQ7M6Y6 1581 aa14.85□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Eid3Q3V124 375 aa14.84□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Stra8P70278 393 aa14.83□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Neurod1Q60867 357 aa14.83□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Chic2Q9D9G3 165 aa14.83□□□□□ -0.03
Ldb3-205ENSMUST00000090040 Polr1aO35134 1717 aaKnown RBP14.82□□□□□ -0.04
Ldb3-205ENSMUST00000090040 Supt5hO55201 1082 aaKnown RBP14.82□□□□□ -0.04
Ldb3-205ENSMUST00000090040 Urb2E9Q7L1 1524 aaKnown RBP14.81□□□□□ -0.04
Ldb3-205ENSMUST00000090040 Rad54l2Q99NG0 1466 aa14.8□□□□□ -0.04
Ldb3-205ENSMUST00000090040 Mia2Q91ZV0 1396 aa14.79□□□□□ -0.04
Ldb3-205ENSMUST00000090040 Dnajc5bQ9CQ94 199 aa14.77□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Crocc2F6XLV1 1638 aa14.76□□□□□ -0.05
Ldb3-205ENSMUST00000090040 ClspnQ80YR7 1315 aa14.76□□□□□ -0.05
Ldb3-205ENSMUST00000090040 AqrQ8CFQ3 1481 aaKnown RBP14.75□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Zbtb7cQ8VCZ7 619 aa14.74□□□□□ -0.05
Ldb3-205ENSMUST00000090040 AknaQ80VW7 1404 aa14.74□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Hnrnpul2Q00PI9 745 aaKnown RBP14.74□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Ift140E9PY46 1464 aa14.73□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Hdac5Q9Z2V6 1113 aa14.73□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Plb1Q3TTY0 1478 aa14.73□□□□□ -0.05
Ldb3-205ENSMUST00000090040 Clstn2Q9ER65 966 aa14.71□□□□□ -0.05
Ldb3-205ENSMUST00000090040 CenpbP27790 599 aa14.7□□□□□ -0.06
Ldb3-205ENSMUST00000090040 Mtus2Q3UHD3 1353 aa14.7□□□□□ -0.06
Ldb3-205ENSMUST00000090040 Dhx57Q6P5D3 1388 aaKnown RBP14.7□□□□□ -0.06
Ldb3-205ENSMUST00000090040 SynmQ70IV5 1561 aa14.69□□□□□ -0.06
Ldb3-205ENSMUST00000090040 WrnO09053 1401 aa14.67□□□□□ -0.06
Ldb3-205ENSMUST00000090040 Arap1Q4LDD4 1452 aa14.66□□□□□ -0.06
Ldb3-205ENSMUST00000090040 Cc2d2bA0A286YDU8 1405 aa14.66□□□□□ -0.06
Ldb3-205ENSMUST00000090040 Os9Q8K2C7 672 aa14.64□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Ppargc1bQ8VHJ7 1014 aa14.64□□□□□ -0.07
Ldb3-205ENSMUST00000090040 EprsQ8CGC7 1512 aaKnown RBP14.64□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Arhgef5E9Q7D5 1581 aa14.64□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Cux1P53564 1515 aa14.63□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Nop58Q6DFW4 536 aaKnown RBP14.63□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Gm7298A0A0N4SVU1 1476 aa14.63□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Naip1Q9QWK5 1403 aa14.63□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Ccnb3Q810T2 1396 aa14.61□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Slc24a1Q91WD8 1130 aa14.59□□□□□ -0.07
Ldb3-205ENSMUST00000090040 Anp32bQ9EST5 272 aaKnown RBP14.59□□□□□ -0.07
Ldb3-205ENSMUST00000090040 CadpsQ80TJ1 1355 aa14.58□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Ncoa2Q61026 1462 aa14.58□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Grin2aP35436 1464 aa14.57□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Sall2Q9QX96 1004 aa14.57□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Tiam1Q60610 1591 aa14.57□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Ttbk1Q6PCN3 1308 aa14.56□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Jph4Q80WT0 628 aa14.56□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Erich6D3Z6S9 713 aa14.55□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Unc13aQ4KUS2 1712 aa14.53□□□□□ -0.08
Ldb3-205ENSMUST00000090040 UacaQ8CGB3 1411 aa14.53□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Plekhh2Q8C115 1491 aa14.53□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Fgd6Q69ZL1 1399 aa14.52□□□□□ -0.08
Ldb3-205ENSMUST00000090040 NrdcQ8BHG1 1161 aa14.52□□□□□ -0.08
Ldb3-205ENSMUST00000090040 TchhA0A0B4J1F9 1599 aa14.52□□□□□ -0.08
Ldb3-205ENSMUST00000090040 Cabp1Q9JLK7 227 aa14.52□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Kif21aQ9QXL2 1672 aa14.51□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Rrp7aQ9D1C9 280 aaKnown RBP14.51□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Myt1Q8CFC2 1127 aa14.51□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Soga1E1U8D0 1418 aa14.51□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Ankrd26Q811D2 1581 aa14.49□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Pcf11G3X9Z4 1553 aa14.49□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Samd9lQ69Z37 1561 aa14.49□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Disp1Q3TDN0 1521 aa14.46□□□□□ -0.09
Ldb3-205ENSMUST00000090040 Gm13697A2AK42 830 aa14.45□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Arhgap31A6X8Z5 1425 aa14.45□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Ncapd3Q6ZQK0 1506 aa14.44□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Pabpn1Q8CCS6 302 aaKnown RBP14.44□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Fhad1A6PWD2 1420 aa14.43□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Pla2r1Q62028 1487 aa14.42□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Aebp2Q9Z248 504 aaKnown RBP14.42□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Mphosph9A6H5Y1 991 aa14.41□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Rgl3Q3UYI5 709 aa14.41□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Hspa5P20029 655 aaKnown RBP14.41□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Arid3cA6PWV5 409 aa14.4□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Map4P27546 1125 aaKnown RBP14.4□□□□□ -0.1
Ldb3-205ENSMUST00000090040 Pkd2O35245 966 aa14.39□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Ccdc141E9Q8Q6 1531 aa14.39□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Tnnt3Q9QZ47 272 aa14.39□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Eif4g1Q6NZJ6 1600 aaKnown RBP14.39□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Fam163aQ8CAA5 168 aa14.38□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Gm14025A2AP89 1413 aa14.38□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Vps8Q0P5W1 1427 aa14.38□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Lemd3Q9WU40 921 aa14.37□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Mapk8ip2Q9ERE9 830 aa14.35□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Tdrd9Q14BI7 1383 aa14.35□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Gpatch8A2A6A1 1505 aa14.35□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Sart1Q9Z315 806 aaKnown RBP14.34□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Nup155Q99P88 1391 aaKnown RBP14.33□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Nup160Q9Z0W3 1402 aaKnown RBP14.33□□□□□ -0.11
Ldb3-205ENSMUST00000090040 Magi3Q9EQJ9 1476 aa14.33□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Amer1Q7TS75 1132 aa14.33□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Erich3F6QRE9 1637 aa14.33□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Ankrd36D3Z4K0 1415 aa14.32□□□□□ -0.12
Ldb3-205ENSMUST00000090040 Mug1P28665 1476 aa14.32□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms