RNA–Protein interactions for RNA: ENSMUST00000087315.13

Vars-201, Transcript of Valine--tRNA ligase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vars, Length 4,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vars-201ENSMUST00000087315 NeflP08551 543 aa18.74■□□□□ 0.59
Vars-201ENSMUST00000087315 Top2bQ64511 1612 aa18.74■□□□□ 0.59
Vars-201ENSMUST00000087315 Nolc1E9Q5C9 702 aaKnown RBP18.73■□□□□ 0.59
Vars-201ENSMUST00000087315 Rtl5Q5DTT4 599 aa18.71■□□□□ 0.59
Vars-201ENSMUST00000087315 4933416C03RikQ3V063 378 aa18.7■□□□□ 0.58
Vars-201ENSMUST00000087315 Znf710Q3U288 666 aa18.69■□□□□ 0.58
Vars-201ENSMUST00000087315 Ccer2J3QPU5 274 aa18.69■□□□□ 0.58
Vars-201ENSMUST00000087315 Ifnlr1Q8CGK5 535 aa18.69■□□□□ 0.58
Vars-201ENSMUST00000087315 Top2aQ01320 1528 aaKnown RBP18.68■□□□□ 0.58
Vars-201ENSMUST00000087315 Cttnbp2B9EJA2 1648 aa18.68■□□□□ 0.58
Vars-201ENSMUST00000087315 Mrs2Q5NCE8 434 aa18.68■□□□□ 0.58
Vars-201ENSMUST00000087315 P3h3Q8CG70 732 aa18.68■□□□□ 0.58
Vars-201ENSMUST00000087315 Sin3aQ60520 1274 aaKnown RBP18.68■□□□□ 0.58
Vars-201ENSMUST00000087315 Wdr43Q6ZQL4 677 aaKnown RBP18.61■□□□□ 0.57
Vars-201ENSMUST00000087315 Baz1bQ9Z277 1479 aa18.6■□□□□ 0.57
Vars-201ENSMUST00000087315 Kif15Q6P9L6 1387 aa18.57■□□□□ 0.56
Vars-201ENSMUST00000087315 Supt16hQ920B9 1047 aa18.57■□□□□ 0.56
Vars-201ENSMUST00000087315 Os9Q8K2C7 672 aa18.57■□□□□ 0.56
Vars-201ENSMUST00000087315 Ubl4bQ9CQ84 188 aa18.57■□□□□ 0.56
Vars-201ENSMUST00000087315 Rpap1Q80TE0 1409 aa18.55■□□□□ 0.56
Vars-201ENSMUST00000087315 Arap1Q4LDD4 1452 aa18.54■□□□□ 0.56
Vars-201ENSMUST00000087315 BicraF8VPZ9 1578 aa18.53■□□□□ 0.56
Vars-201ENSMUST00000087315 Gm13697A2AK42 830 aa18.52■□□□□ 0.56
Vars-201ENSMUST00000087315 Smarca4Q3TKT4 1613 aaKnown RBP18.49■□□□□ 0.55
Vars-201ENSMUST00000087315 PrkcshO08795 521 aa18.49■□□□□ 0.55
Vars-201ENSMUST00000087315 Ccdc18Q640L5 1455 aa18.48■□□□□ 0.55
Vars-201ENSMUST00000087315 Slc4a3P16283 1227 aa18.47■□□□□ 0.55
Vars-201ENSMUST00000087315 Arhgap35Q91YM2 1499 aa18.47■□□□□ 0.55
Vars-201ENSMUST00000087315 Fkbp15Q6P9Q6 1216 aaKnown RBP18.46■□□□□ 0.55
Vars-201ENSMUST00000087315 PtprkP35822 1457 aa18.44■□□□□ 0.54
Vars-201ENSMUST00000087315 Wwc2Q6NXJ0 1187 aa18.43■□□□□ 0.54
Vars-201ENSMUST00000087315 DaxxO35613 739 aa18.43■□□□□ 0.54
Vars-201ENSMUST00000087315 Prdm10Q3UTQ7 1184 aa18.38■□□□□ 0.53
Vars-201ENSMUST00000087315 Rad21Q61550 635 aaKnown RBP18.38■□□□□ 0.53
Vars-201ENSMUST00000087315 Rgl3Q3UYI5 709 aa18.36■□□□□ 0.53
Vars-201ENSMUST00000087315 Smg6P61406 1418 aaKnown RBP18.34■□□□□ 0.53
Vars-201ENSMUST00000087315 Arhgef5E9Q7D5 1581 aa18.33■□□□□ 0.53
Vars-201ENSMUST00000087315 Erich6D3Z6S9 713 aa18.31■□□□□ 0.52
Vars-201ENSMUST00000087315 Pak3Q61036 559 aa18.31■□□□□ 0.52
Vars-201ENSMUST00000087315 Naip1Q9QWK5 1403 aa18.3■□□□□ 0.52
Vars-201ENSMUST00000087315 Ofd1Q80Z25 1017 aa18.28■□□□□ 0.52
Vars-201ENSMUST00000087315 Exoc6Q8R313 802 aa18.28■□□□□ 0.52
Vars-201ENSMUST00000087315 AqrQ8CFQ3 1481 aaKnown RBP18.27■□□□□ 0.52
Vars-201ENSMUST00000087315 Mia2Q91ZV0 1396 aa18.26■□□□□ 0.51
Vars-201ENSMUST00000087315 Iqgap2Q3UQ44 1575 aa18.26■□□□□ 0.51
Vars-201ENSMUST00000087315 ArxO35085 564 aa18.25■□□□□ 0.51
Vars-201ENSMUST00000087315 Grwd1Q810D6 446 aaKnown RBP18.24■□□□□ 0.51
Vars-201ENSMUST00000087315 Tiam1Q60610 1591 aa18.2■□□□□ 0.5
Vars-201ENSMUST00000087315 Aebp1Q640N1 1128 aa18.18■□□□□ 0.5
Vars-201ENSMUST00000087315 Nlrp6Q91WS2 869 aa18.18■□□□□ 0.5
Vars-201ENSMUST00000087315 Kdm5bQ80Y84 1544 aa18.18■□□□□ 0.5
Vars-201ENSMUST00000087315 Polr3glQ8R0C0 218 aa18.17■□□□□ 0.5
Vars-201ENSMUST00000087315 Fyco1Q8VDC1 1437 aa18.16■□□□□ 0.5
Vars-201ENSMUST00000087315 UacaQ8CGB3 1411 aa18.16■□□□□ 0.5
Vars-201ENSMUST00000087315 Ccdc27Q3V036 639 aa18.16■□□□□ 0.5
Vars-201ENSMUST00000087315 Slc4a2P13808 1237 aaKnown RBP18.15■□□□□ 0.5
Vars-201ENSMUST00000087315 Shroom4Q1W617 1475 aa18.15■□□□□ 0.5
Vars-201ENSMUST00000087315 Dhx29Q6PGC1 1365 aaKnown RBP18.15■□□□□ 0.5
Vars-201ENSMUST00000087315 Washc2Q6PGL7 1334 aa18.14■□□□□ 0.49
Vars-201ENSMUST00000087315 CntlnA2AM05 1397 aa18.14■□□□□ 0.49
Vars-201ENSMUST00000087315 NrkQ9R0G8 1455 aa18.14■□□□□ 0.49
Vars-201ENSMUST00000087315 Mphosph9A6H5Y1 991 aa18.12■□□□□ 0.49
Vars-201ENSMUST00000087315 Pkd2O35245 966 aa18.11■□□□□ 0.49
Vars-201ENSMUST00000087315 Card11Q8CIS0 1159 aa18.11■□□□□ 0.49
Vars-201ENSMUST00000087315 Fhad1A6PWD2 1420 aa18.1■□□□□ 0.49
Vars-201ENSMUST00000087315 Eif4g1Q6NZJ6 1600 aaKnown RBP18.1■□□□□ 0.49
Vars-201ENSMUST00000087315 Kcnh8P59111 1102 aa18.09■□□□□ 0.49
Vars-201ENSMUST00000087315 Ankrd36D3Z4K0 1415 aa18.09■□□□□ 0.49
Vars-201ENSMUST00000087315 Upf2A2AT37 1269 aaKnown RBP18.08■□□□□ 0.49
Vars-201ENSMUST00000087315 TchhA0A0B4J1F9 1599 aa18.08■□□□□ 0.48
Vars-201ENSMUST00000087315 Ercc6F8VPZ5 1481 aa18.08■□□□□ 0.48
Vars-201ENSMUST00000087315 Pds5bQ4VA53 1446 aaKnown RBP18.07■□□□□ 0.48
Vars-201ENSMUST00000087315 3425401B19RikD3Z1D3 1412 aa18.06■□□□□ 0.48
Vars-201ENSMUST00000087315 Atad2bE9Q166 1460 aaKnown RBP18.06■□□□□ 0.48
Vars-201ENSMUST00000087315 Gm13695A2AK44 830 aa18.06■□□□□ 0.48
Vars-201ENSMUST00000087315 Cabp1Q9JLK7 227 aa18.06■□□□□ 0.48
Vars-201ENSMUST00000087315 Hdac5Q9Z2V6 1113 aa18.04■□□□□ 0.48
Vars-201ENSMUST00000087315 Slx4Q6P1D7 1565 aa18.04■□□□□ 0.48
Vars-201ENSMUST00000087315 Hsp90aa1P07901 733 aaKnown RBP18.04■□□□□ 0.48
Vars-201ENSMUST00000087315 Rangap1P46061 589 aaKnown RBP18.04■□□□□ 0.48
Vars-201ENSMUST00000087315 Cwc22Q8C5N3 908 aaKnown RBP18.02■□□□□ 0.48
Vars-201ENSMUST00000087315 Pcf11G3X9Z4 1553 aa18.02■□□□□ 0.47
Vars-201ENSMUST00000087315 Vps8Q0P5W1 1427 aa18.02■□□□□ 0.47
Vars-201ENSMUST00000087315 Liat1Q810M6 228 aa18.01■□□□□ 0.47
Vars-201ENSMUST00000087315 Ccnb3Q810T2 1396 aa18.01■□□□□ 0.47
Vars-201ENSMUST00000087315 Arhgap27A2AB59 869 aa18.01■□□□□ 0.47
Vars-201ENSMUST00000087315 Apbb1Q9QXJ1 710 aa18.01■□□□□ 0.47
Vars-201ENSMUST00000087315 CanxP35564 591 aaKnown RBP18■□□□□ 0.47
Vars-201ENSMUST00000087315 Tcerg1Q8CGF7 1100 aaKnown RBP18■□□□□ 0.47
Vars-201ENSMUST00000087315 Mroh2bQ7M6Y6 1581 aa18■□□□□ 0.47
Vars-201ENSMUST00000087315 Map3k1P53349 1493 aa18■□□□□ 0.47
Vars-201ENSMUST00000087315 ChgaP26339 463 aaKnown RBP17.99■□□□□ 0.47
Vars-201ENSMUST00000087315 Zfp644E9QA22 1323 aa17.99■□□□□ 0.47
Vars-201ENSMUST00000087315 Carmil1Q6EDY6 1374 aa17.98■□□□□ 0.47
Vars-201ENSMUST00000087315 Ipo9Q91YE6 1041 aa17.98■□□□□ 0.47
Vars-201ENSMUST00000087315 Kif27Q7M6Z4 1394 aa17.98■□□□□ 0.47
Vars-201ENSMUST00000087315 Mtus2Q3UHD3 1353 aa17.98■□□□□ 0.47
Vars-201ENSMUST00000087315 Rundc1Q0VDN7 615 aa17.98■□□□□ 0.47
Vars-201ENSMUST00000087315 Usp47Q8BY87 1376 aa17.97■□□□□ 0.47
Vars-201ENSMUST00000087315 Ankrd26Q811D2 1581 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms